Insertion of cellular sequence and RNA recombination in the structural protein coding region of cytopathogenic bovine viral diarrhoea virus

Journal of General Virology

Volumn 84, Issue 2, 2003, Pages 447-452

  Nagai, Makoto ^a   Sakoda, Yoshihiro ^b   Mori, Masashi ^c   Hayashi, Michiko ^a   Kida, Hiroshi ^b   Akashi, Hiroomi ^d,e  

^a ISHIKAWA PREFECTURAL UNIVERSITY   (Japan)

^b HOKKAIDO UNIVERSITY   (Japan)

^c Ishikawa Agricultural College   (Japan)

^d NATIONAL INSTITUTE OF ANIMAL HEALTH   (Japan)

^e UNIVERSITY OF TOKYO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

NUCLEOCAPSID PROTEIN; PROTEIN C; STRUCTURAL PROTEIN; VIRUS RNA;

BOVINE DIARRHEA VIRUS; CONTROLLED STUDY; CYTOPATHOGENIC EFFECT; DOWNSTREAM PROCESSING; GASTROINTESTINAL DISEASE; GASTROINTESTINAL MUCOSA; GENE DUPLICATION; GENE INSERTION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC CODE; HOMOLOGOUS RECOMBINATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; REVIEW; RNA RECOMBINATION; SEQUENCE HOMOLOGY; STRAIN DIFFERENCE; VIRUS GENOME; VIRUS ISOLATION;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BOVINE VIRUS DIARRHEA-MUCOSAL DISEASE; CATTLE; CELL LINE; CELLS, CULTURED; CYTOPATHOGENIC EFFECT, VIRAL; DIARRHEA VIRUSES, BOVINE VIRAL; MOLECULAR SEQUENCE DATA; NUCLEOCAPSID PROTEINS; RECOMBINATION, GENETIC; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; VIRAL STRUCTURAL PROTEINS;

ANIMALIA; BOVINAE; BOVINE VIRAL DIARRHEA VIRUS 1; DNA VIRUSES; RNA VIRUSES;

EID: 0037314071     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.18773-0     Document Type: Review

References (34)

1. Baroth, M., Orlich, M., Thiel, H.-J. & Becher, P. (2000). Insertion of cellular NEDD8 coding sequences in a pestivirus. Virology 278, 456-466.
2. Becher, P., Meyers, G., Shannon, A. D. & Thiel, H.-J. (1996). Cytopathogenicity of border disease virus is correlated with integration of cellular sequences into the viral genome. J Virol 70, 2992-2998.
3. Becher, P., Orlich, M. & Thiel, H.-J. (1998). Ribosomal S27a-coding sequence upstream of ubiquitin-coding sequences in the genome of a pestivirus. J Virol 72, 8697-8704.
4. Becher, P., Orlich, M., Konig, M. & Thiel, H.-J. (1999). Nonhomologous RNA recombination in bovine viral diarrhea virus: molecular characterization of a variety of subgenomic RNAs isolated during an outbreak of fatal mucosal disease. J Virol 73, 5646-5653.
5. Becher, P., Orlich, M. & Thiel, H.-J. (2001). RNA recombination between persisting pestivirus and a vaccine strain: generation of cytopathogenic virus and induction of lethal disease. J Virol 75, 6256-6264.
6. Collett, M. S., Larson, R., Gold, C., Strick, D., Anderson, D. K. & Purchio, A. F. (1988). Molecular cloning and nucleotide sequence of the pestivirus bovine viral diarrhea virus. Virology 165, 191-199.
7. De Moerlooze, L., Lecomte, C., Brown-Shimmer, S. & 9 other authors (1993). Nucleotide sequence of the bovine viral diarrhoea virus Osloss strain: comparison with related viruses and identification of specific DNA probes in the 5′ untranslated region. J Gen Virol 74, 1433-1438.
8. Deng, R. & Brock, K. V. (1992). Molecular cloning and nucleotide sequence of a pestivirus genome, noncytopathic bovine viral diarrhea virus strain SD-1. Virology 191, 867-879.
9. Fritzemeier, J., Haas, L., Liebler, E., Moennig, V. & Greiser-Wilke, I. (1997). The development of early vs. late onset mucosal disease is a consequence of two different pathogenic mechanisms. Arch Virol 142, 1335-1350.
10. Heinz, F. X., Collett, M. S., Purcell, R. H., Gould, E. A., Howard, C. R., Houghton, M., Moormann, R. J. M., Rice, C. M. & Thiel, H.-J. (2000). Family Flaviviridae. In Virus Taxonomy. Seventh Report of the International Committee on Taxonomy of Viruses, pp. 859-878. Edited by M. H. V. van Regenmortel, C. M. Fauquet, D. H. L. Bishop, E. B. Carstens, M. K. Estes, S. M. Lemon, J. Maniloff, M. A. Mayo, D. J. McGeoch, C. R. Pringle & R. B. Wickner. San Diego: Academic Press.
11. Kodama, K., Sasaki, N., Fukuyama, S., Izumida, A. & Ishii, F. (1974). Studies on cytopathogenic bovine viral diarrhea virus recovery, identification, and properties of the isolates virus. Bull Nippon Vet Zootech Coll 23, 51-60.
12. Kümmerer, B. M. & Meyers, G. (2000). Correlation between point mutations in NS2 and the viability and cytopathogenicity of bovine viral diarrhea virus strain Oregon analyzed with an infectious cDNA clone. J Virol 74, 390-400.
13. Kümmerer, B. M., Stoll, D. & Meyers, G. (1998). Bovine viral diarrhea strain Oregon: a novel mechanism for processing of NS2-3 based on point mutations. J Virol 72, 4127-4138.
14. Kupfermann, H., Thiel, H.-J., Dubovi, E. J. & Meyers, G. (1996). Bovine viral diarrhea virus: characterization of a cytopathogenic defective interfering particle with two internal deletions. J Virol 70, 8175-8181.
15. Meyers, G. & Thiel, H.-J. (1996). Molecular characterization of pestiviruses. Adv Virus Res 47, 53-118.
16. Meyers, G., Tautz, N., Dubovi, E. J. & Thiel, H.-J. (1991). Viral cytopathogenicity correlated with integration of ubiquitin-coding sequences. Virology 180, 602-616.
17. Meyers, G., Tautz, N., Stark, R., Brownlie, J., Dubovi, E. J., Collett, M. S. & Thiel, H.-J. (1992). Rearrangement of viral sequences in cytopathogenic pestiviruses. Virology 191, 368-386.
18. Meyers, G., Stoll, D. & Gunn, M. (1998). Insertion of a sequence encoding light chain 3 of microtubule-associated proteins 1A and 1B in a pestivirus genome: connection with virus cytopathogenicity and induction of lethal disease in cattle. J Virol 72, 4139-4148.
19. Nagai, M., Ito, T., Sugita, S. & 7 other authors (2001). Genomic and serological diversity of bovine viral diarrhea virus in Japan. Arch Virol 146, 685-696.
20. Neill, J. D. & Ridpath, J. F. (2001). Recombination with a cellular mRNA encoding a novel DnaJ protein results in biotype conversion in genotype 2 bovine viral diarrhea viruses. Virus Res 79, 59-69.
21. Qi, F., Ridpath, J. F., Lewis, T., Bolin, S. R. & Berry, E. S. (1992). Analysis of the bovine viral diarrhea virus genome for possible cellular insertions. Virology 189, 285-292.
22. Qi, F., Ridpath, J. F. & Berry, E. S. (1998). Insertion of a bovine SMT3B gene in NS4B and duplication of NS3 in a bovine viral diarrhea virus genome correlate with the cytopathogenicity of the virus. Virus Res 57, 1-9.
23. Ridpath, J. F. & Bolin, S. R. (1995). Delayed onset postvaccinal mucosal disease as a result of genetic recombination between genotype 1 and genotype 2 BVDV. Virology 212, 259-262.
24. Ridpath, J. F. & Neill, J. D. (2000). Detection and characterization of genetic recombination in cytopathic type 2 bovine viral diarrhea viruses. J Virol 74, 8771-8774.
25. Rinck, G., Birghan, C., Harada, T., Meyers, G., Thiel, H.-J. & Tautz, N. (2001). A cellular J-domain protein modulates polyprotein processing and cytopathogenicity of a pestivirus. J Virol 75, 9470-9482.
26. Sakoda, Y., Yamaguchi, O. & Fukusho, A. (1998). A new assay for classical swinefever virus based on cytopathogenicity in porcine kidney cell line FS-L3. J Virol Methods 70, 93-101.
27. Sentsui, H., Nishimori, T., Kirisawa, R. & Morooka, A. (2001). Mucosal disease induced in cattle persistently infected with bovine viral diarrhea virus by antigenically different cytopathic virus. Arch Virol 146, 993-1006.
28. Shimizu, M. & Satou, K. (1987). Frequency of persistent infection of cattle with bovine viral diarrhea-mucosal disease virus in epidemic areas. Jpn J Vet Sci 49, 1045-1051.
29. Shimizu, M., Satou, K., Nishioka, N., Yoshino, T., Momotani, E. & Ishikawa, Y. (1989). Serological characterization of viruses isolated from experimental mucosal disease. Vet Microbiol 19, 12-21.
30. Tautz, N., Thiel, H.-J., Dubovi, E. J. & Meyers, G. (1994). Pathogenesis of mucosal disease: a cytopathogenic pestivirus generated by internal deletion. J Virol 68, 3289-3297.
31. Tautz, N., Meyers, G., Stark, R., Dubovi, E. J. & Thiel, H.-J. (1996). Cytopathogenicity of a pestivirus correlated with a 27-nucleotide insertion. J Virol 70, 7851-7858.
32. Thiel, H.-J., Plagemann, P. G. W. & Moenning, V. (1996). Pestiviruses. In Fields Virology, 3rd edn, vol. 1, pp. 1059-1073. Edited by B. N. Fields, D. M. Knipe & P. M. Howley. Philadelphia: Lippincott-Raven.
33. Vilcek, S., Herring, A. J., Herring, J. A., Nettleton, P. F., Lowings, J. P. & Paton, D. J. (1994). Pestiviruses isolates from pigs, cattle and sheep can be allocated into at least three genogroups using polymerase chain reaction and restriction endonuclease analysis. Arch Virol 136, 309-323.
34. Vilcek, S., Greiser-Wilke, I., Nettleton, P. & Paton, D. J. (2000). Cellular insertions in the NS2-3 genome region of cytopathic bovine viral diarrhea virus (BVDV) isolates. Vet Microbiol 77, 129-136.