Complex events in the evolution of the human pseudoautosomal region 2 (PAR2)

Genome Research

Volumn 13, Issue 2, 2003, Pages 281-286

  Charchar, Fadi J ^a,f   Svartman, Marta ^a,b   El Mogharbel, Nisrine ^a,c   Ventura, Mario ^d   Kirby, Patrick ^a,c   Matarazzo, Maria R ^e   Ciccodicola, Alfredo ^e   Rocchi, Mariano ^d   D'Esposito, Maurizio ^e   Marshall Graves, Jennifer A ^a,c  

^a LA TROBE UNIVERSITY   (Australia)

^b UNIVERSITY OF SÃO PAULO   (Brazil)

^c AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

^d UNIVERSITY OF BARI   (Italy)

^e INSTITUTE OF GENETICS AND BIOPHYSICS ADRIANO BUZZATI TRAVERSO   (Italy)

^f UNIVERSITY OF GLASGOW   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOME PROTEIN; INTERLEUKIN 9 RECEPTOR; PROTEIN PAR2; SYNAPTOBREVIN; UNCLASSIFIED DRUG; IL9R PROTEIN, HUMAN; INTERLEUKIN 9; INTERLEUKIN RECEPTOR; MEMBRANE PROTEIN; PROTEIN; SPRY3 PROTEIN, HUMAN; SYBL1 PROTEIN, HUMAN; SYBL1 PROTEIN, MOUSE;

ANIMAL TISSUE; ARTICLE; AUTOSOMAL INHERITANCE; CAT; CHROMOSOME ARM; CHROMOSOME DUPLICATION; CHROMOSOME PAIRING; CHROMOSOME REARRANGEMENT; COMPARATIVE GENE MAPPING; CONTROLLED STUDY; GENE LOCATION; GENE ORDER; GENETIC TRANSCRIPTION; HUMAN; MARSUPIAL; MEIOSIS; MOLECULAR CLONING; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIMATE; PRIORITY JOURNAL; PROSIMIAN; X CHROMOSOME; Y CHROMOSOME; ANIMAL; CHROMOSOME MAP; COMPARATIVE STUDY; GENETICS; HUMAN CHROMOSOME; METHODOLOGY; MOLECULAR GENETICS; SEQUENCE HOMOLOGY;

ANIMALIA; EUTHERIA; FELIS CATUS; LEMUR; MACROPUS EUGENII; METATHERIA; PRIMATES; STREPSIRHINI;

ANIMALS; CATS; CHROMOSOME MAPPING; CHROMOSOMES, HUMAN; EVOLUTION, MOLECULAR; HUMANS; INTERLEUKIN-9; LEMUR; MACROPODIDAE; MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; PROTEINS; R-SNARE PROTEINS; RECEPTORS, INTERLEUKIN; RECEPTORS, INTERLEUKIN-9; SEQUENCE HOMOLOGY, NUCLEIC ACID; X CHROMOSOME; Y CHROMOSOME;

EID: 0037313924     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.390503     Document Type: Article

References (27)

1. Ashley, T., Moses, MJ., and Solari, A.J. 1981. Fine structure and behaviour of a pericentric inversion in the sand rat, Psammomys obesus. J. Cell Sci. 50: 105-119.
2. Charchar, F.J., Svartman, M., and Graves, J.A.M. 2000. Assignment of SPROUTY 1 (SPRY1) gene to tammar wallaby chromosome 6 by fluorescence in situ hybridization. Cytogenet. Cell Genet. 90: 240-241.
3. Ciccodicola, A., D'Esposito, M., Esposito, T., Gianfrancesco, F., Migliaccio, C., Miano, M.G., Matarazzo, M.R., Vacca, M., Franze, A., Cuccurese, M., et. al. 2000. Differentially regulated and evolved genes in the fully sequenced Xq/Yq pseudoautosomal region. Hum. Mol. Genet. 12: 395-401.
4. Cooke, H.J., Brown, W.R., and Rappold, G.A. 1985. Hypervariable telomeric sequences from the human sex chromosomes are pseudoautosomal. Nature 317: 687-692.
5. Delbridge, M.L., Harry, J.L., Toder, R., O'Neill, R.J., Ma, K., Chandley, A.C., and Graves, J.A.M. 1997. A human candidate spermatogenesis gene, RBM1, is conserved and amplified on the marsupial Y chromosome. Nat. Genet. 15: 131-136.
6. D'Esposito, M., Matarazzo, M.R., Ciccodicola, A., Strazzullo, M., Mazzarella, R., Quaderi, N.A., Fujiwara, H., Ko, M.S., Rowe, L.B., Ricco, A., et al. 1997. Differential expression pattern of XqPAR-linked genes SYBL1 and IL9R correlates with the structure and evolution of the region. Hum. Mol. Genet. 6: 1917-1923.
7. Freije, D., Helms, C., Watson, M.S., and Donis-Keller, H. 1992. Identification of a second pseudoautosomal region near the Xq and Yq telomeres. Science 258: 1784-1787.
8. Gianfrancesco, F., Falco, G., Esposito, T., Rocchi, M., and D'Urso, M. 2001a. Characterization of the murine orthologue of a novel human subtelomeric multigene family. Cytogenet. Cell Genet. 94: 98-100.
9. Gianfrancesco, F., Sanges, R., Esposito, T., Tempesta, S., Rao, E., Rappold, G., Archidiacono, N., Graves, J.A.M., Forabosco, A., and D'Urso, M. 2001b. Differential divergence of three human pseudoautosomal genes and their mouse homologs: Implications for sex chromosome evolution. Genome Res. 11: 2095-2100.
10. Graves, J.A.M. 1995. The origin and function of the mammalian Y chromosome and Y-borne genes - an evolving understanding. Bioessays 17: 311-320.
11. Graves, J.A.M., Wakefield, M.J., and Toder, R. 1998. The origin and evolution of the pseudoautosomal regions of human sex chromosomes. Hum. Mol. Genet. 7: 1991-1996.
12. Huber, R., Hansen, R.S., Strazzullo, M., Pengue, G., Mazzarella, R., D'Urso, M., Schlessinger, D., Pilia, G., Gartler, S.M., and D'Esposito, M. 1999. DNA methylation in transcriptional repression of two differentially expressed X-linked genes, GPC3 and SYBL1. Proc. Natl. Acad. Sci. 96: 616-621.
13. Kermouni, A., Van Roost, E., Arden, K.C., Vermeesch, J.R., Weiss, S., Godelaine, D., Flint, J., Lurquin, C., Szikora, J.P., Higgs, D.R., et al. 1995. The IL-9 receptor gene (IL9R): Genomic structure, chromosomal localization in the pseudoautosomal region of the long arm of the sex chromosomes, and identification of IL9R pseudogenes at 9qter, 10pter, 16pter, and 18pter. Genomics. 29: 371-382.
14. Kuhl, H., Rottger, S., Heilbronner, H., Enders, H., and Schempp, W. 2001. Loss of the Y chromosomal PAR2-region in four familial cases of satellited Y chromosomes (Yqs). Chromosome Res. 9: 215-222.
15. Kvaloy, K., Galvagni, F., and Brown, W.R. 1994. The sequence organization of the long arm pseudoautosomal region of the human sex chromosomes. Hum. Mol. Genet. 3: 771-778.
16. Kumar, S. and Hedges, S.B.A. 1998. Molecular timescale for vertebrate evolution. Nature 392: 917-920.
17. Li, L. and Hamer, D.H. 1995. Recombination and allelic association in the Xq/Yq homology region. Hum. Mol. Genet. 4: 2013-2016.
18. Lichter, P., Tang Chang, C.J., Call, K., Hermanson, G., Evans, G.A., Housman, D., and Ward, D.C. 1990. High resolution mapping of human chromosomes 11 by in situ hybridization with cosmid clones. Science 247: 64-69.
19. Matarazzo, M.R., Cuccurese, M., Strazzullo, M., Vacca, M., Curci, A., Giuseppina Miano, M., Cocchia, M., Mercadante, G.,Torino, A., et al. 1999. Human and mouse SYBL1 gene structure and expression. Gene 240: 233-238.
20. Rappold, G.A. 1993. The pseudoautosomal regions of the human sex chromosomes. Hum. Genet. 92: 315-324.
21. Rens, W., O'Brien, P.C., Yang, F., Graves, J.A.M., and Ferguson-Smith, M.A. 1999. Karyotype relationships between four distantly related marsupials revealed by reciprocal chromosome painting. Chromosome Res. 7: 461-474.
22. Svartman, M. and Vianna-Morgante, A.M. 1999. Comparative genome analysis in American marsupials through banding and in situ hybridization. Chromosome Res. 7: 267-275.
23. Toder, R. and Graves, J.A.M. 1998. CSF2RA, ANT3, and STS are autosomal in marsupials: Implications for the origin of the pseudoautosomal region of mammalian sex chromosomes. Mamm. Genome. 9: 373-376.
24. 2 sex chromosome system. Mammal Genome. 8: 418-442.
25. Vermeesch, J.R., Petit, P., Kermouni, A., Renauld, J.C., Van Den Berghe, H., and Marynen, P. 1997. The IL-9 receptor gene, located in the Xq/Yq pseudoautosomal region, has an autosomal origin, escapes X inactivation and is expressed from the Y. Hum. Mol. Genet. 6: 1-8.
26. Vogt, P.H., Affara, N., Davey, P., Hammer, M., Jobling, M.A., Lau, Y.F., Mitchell, M., Schempp, W., Tyler-Smith, C., Williams, G., et al. 1997. Report of the third international workshop on Y chromosome mapping. 1997. Heidelberg, Germany Cytogenet. Cell Genet. 79: 1-20.
27. Waters, P.D., Duffy, B., Frost, C.J., Delbridge, M.L., and Graves, J.A.M. 2001. The human Y chromosome derives largely from a single autosomal region added to the sex chromosomes 80-130 million years ago. Cytogenet. Cell Genet. 92: 74-79.