Protein interactions and membrane geometry

Biophysical Journal

Volumn 84, Issue 2 I, 2003, Pages 854-868

  Grabe, Michael ^a,c   Neu, John ^a   Oster, George ^a   Nollert, Peter ^b,d  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d DeCODE Chemistry & Biostructures   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MEMBRANE PROTEIN;

ARTICLE; CLUSTER ANALYSIS; CRYSTAL STRUCTURE; CRYSTALLIZATION; ENDOPLASMIC RETICULUM; GEOMETRY; GOLGI COMPLEX; MOLECULAR DYNAMICS; MOLECULAR MECHANICS; MOLECULAR MODEL; PHASE TRANSITION; PROTEIN INTERACTION; PROTEIN STRUCTURE; PROTEIN TARGETING; X RAY CRYSTALLOGRAPHY;

EID: 0037304543     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(03)74904-2     Document Type: Article

References (36)

1. Andersen, D. M., H. T. Davis, L. E. Scriven, and J. C. C. Nitsche. 1990. Periodic surfaces of prescribed mean curvature. Adv. Chem. Phys. 77:337-396.
2. Anderson, D. M., S. M. Gruner, and S. Leibler. 1988. Geometrical aspects of the frustration in the cubic phases of lyotropic liquid crystals. Proc. Natl. Acad. Sci. USA. 85:5364-5368.
3. Auer, S., and D. Frenkel. 2001. Prediction of absolute crystal-nucleation rate in hard-sphere colloids. Nature. 409:1020-1023.
4. Belrhali, H., P. Nollert, A. Royant, C. Menzel, J. P. Rosenbusch, E. M. Landau, and E. Pebay-Peyroula. 1999. Protein, lipid and water organization in bacteriorhodopsin crystals: a molecular view of the purple membrane at 1.9 ANG resolution. Structure. 7:909-917.
5. Brakke, K. 1992. The surface evolver. Experiment. Math. 1:141-165.
6. Caffrey, M. 2000. A lipid's eye view of membrane protein crystallization in mesophases. Curr. Opin. Struct. Biol. 10:486-497.
7. Chiu, M. L., P. Nollert, M. C. Loewen, H. Belrhali, E. Pebay-Peyroula, J. P. Rosenbusch. and E. M. Landau. 2000. Crystallization in cubo: general applicability to membrane proteins. Acta Crystallogr. D Biol. Crystallogr. 56:781-784.
8. Chung, H., and M. Caffrey. 1994. The curvature elastic-energy function of the lipid-water cubic mesophase. Nature. 368:224-226.
9. Deng, Y. R., S. D. Kohlwein, and C. A. Mannella. 2002. Fasting induces cyanide-resistant respiration and oxidative stress in the amoeba Chaos carolinensis: implications for the cubic structural transition in mitochondrial membranes. Protoplasma. 219:160-167.
10. Grosse-Brauckmann, K. 1997. On gyroid interfaces. J. Coll. Interf. Sci. 187:418-428.
11. Harroun, T. A., W. T. Heller, T. M. Weiss. L. Yang, and H. W. Huang. 1999. Theoretical analysis of hydrophobic matching and membrane-mediated interactions in lipid bilayers containing gramicidin. Biophys. J. 76:3176-3185.
12. Helfrich, W. 1973. Elastic properties of lipid bilayers: theory and possible experiments. Z. Naturforsch. [C]. 28:693-703.
13. Helfrich, W. 1999. Bending elasticity of fluid membranes. In Giant Vesicles. P. Walde and P. L. Luisi, editors. John Wiley & Sons, New York. p. 51.
14. Israelachvili, J., and J. Wolfe. 1980. The membrane geometry of the prolamellar body. Protoplasma. 100:315-321.
15. Kim, K. S., J. Neu, and G. Oster. 1998. Curvature-mediated interactions between membrane proteins. Biophys. J. 75:2274-2291.
16. Kolbe, M., H. Besir, L. O. Essen, and D. Oesterhelt. 2000. Structure of the light-driven chloride pump halorhodopsin at 1.8 ANG resolution. Science. 288:1390-1396.
17. Landau, E. M., and J. P. Rosenbusch. 1996. Lipidic cubic phases: a novel concept for the crystallization of membrane proteins. Proc. Natl. Acad. Sci. USA. 93:14532-14535.
18. Landh, T. 1995. From entangled membranes to eclectic morphologies: cubic membranes as subcellular space organizer. FEBS Lett. 369:13-17.
19. Lifshitz, I. M., and V. V. Slezov. 1961. The kinetics of precipitation from supersaturated solid solutions. J. Phys. Chem. Solids. 19:35-50.
20. Luecke, H., B. Schobert. J. K. Lanyi, E. N. Spudich, and J. L. Spudich. 2001. Crystal structure of sensory rhodopsin II at 2.4 angstroms: insights into color tuning and transducer interaction. Science. 293: 1499-1503.
21. Nielsen, C., M. Goulian, and O. S. Andersen. 1998. Energetics of inclusion-induced bilayer deformations. Biophys. J. 74:1966-1983.
22. Nollert, P., H. Qiu, M. Caffrey, J. P. Rosenbusch, and E. M. Landau. 2001. Molecular mechanism for the crystallization of bacteriorhodopsin in lipidic cubic phases. FEBS Lett. 504:179-186.
23. Paumard, P., J. Vaillier, B. Coulary, J. Schaeffer, V. Soubannier, D. M. Mueller, D. Brethes, J. P. di Rago, and J. Velours. 2002. The ATP synthase is involved in generating mitochondrial cristae morphology. EMBO J. 21:221-230.
24. Rambourg, A., and Y. Clermont. 1990. Three-dimensional electron microscopy: structure of the Golgi apparatus. Eur. J. Cell Biol. 51: 189-200.
25. Royant, A., P. Nollert, K. Edman, R. Neutze, E. M. Landau, E. Pebay-Peyroula, and J. Navarro. 2001. X-ray structure of sensory rhodopsin II at 2.1-Angstrom resolution. Proc. Natl. Acad. Sci. USA. 98:10131-10136.
26. Saffman, P. G., and M. Delbruck. 1975. Brownian motion in biological membranes. Proc. Natl. Acad. Sci. USA. 72:3111-3113.
27. Schwarz, U. S., and G. Gompper. 2000. Stability of inverse bicontinuous cubic phases in lipid-water mixtures. Phys. Rev. Lett. 85:1472-1475.
28. Scriven, L. E. 1976. Equilibrium bicontinuous structures. Nature. 93:123-125.
29. Slezov, V. V., J. Schmelzer. and Y. Y. Tkatch. 1996. Number of clusters formed in nucleation-growth processes. J. Chem. Phys. 105:8340-8351.
30. Stock, D., A. Leslie, and J. Walker. 1999. Molecular architecture of the rotary motor in ATP synthase. Science. 286:1700-1705.
31. Templer, R. H., J. M. Seddon, P. M. Duesing, R. Winter, and J. Erbes. 1998. Modeling the phase behavior of the inverse hexagonal and inverse bicontinuous cubic phases in 2:1 fatty acid/phosphatidylcholine mixtures. J. Phys. Chem. B. 102:7262-7271.
32. ten Wolde, P. R., and D. Frenkel. 1997. Enhancement of protein crystal nucleation by critical density fluctuations. Science. 277:1975-1978.
33. Tsapis, N., F. Reiss-Husson. R. Ober, M. Genest, R. S. Hodges, and W. Urbach. 2001. Self diffusion and spectral modifications of a membrane protein, the Rubrivivax gelatinosus LH2 complex, incorporated into a monoolein cubic phase. Biophys. J. 81:1613-1623.
34. Vacklin, M., B. J. Khoo, K. H. Madan, J. M. Seddon, and R. H. Templer. 2000. The bending elasticity of 1-monoolein upon relief of packing stress. Langmuir. 16:4741-4748.
35. Weikl, T. R., M. M. Kozlov, and W. Helfrich. 1998. Interaction of conical membrane inclusions: Effect of lateral tension. Phys. Rev. E. 57:6988-6995.
36. Wu, M. M., M. Grabe, S. Adams, R. Y. Tsien, H. P. Moore, and T. E. Machen. 2001. Mechanisms of pH regulation in the regulated secretory pathway. J. Biol. Chem. 276:33027-33035.