Genetic diversity and pathogenic variability among isolates of Colletotrichum species from strawberry

Phytopathology

Volumn 93, Issue 2, 2003, Pages 219-228

  Denoyes Rothan, Béatrice ^a   Guérin, Guy ^a   Délye, Christophe ^a   Smith, Barbara ^b   Minz, Dror ^c   Maymon, Marcel ^c   Freeman, Stanley ^c  

^a CEMAGREF   (France)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c VOLCANI CENTER   (Israel)

Author keywords

Glomerella cingulata; Internal transcribed spacer; Phylogeny; rDNA

Indexed keywords

CINGULATA; COLLETOTRICHUM; COLLETOTRICHUM ACUTATUM; COLLETOTRICHUM GLOEOSPORIOIDES; FRAGARIA X ANANASSA; FUNGI; GLOMERELLA; GLOMERELLA ACUTATA; GLOMERELLA CINGULATA; MYXOGASTRIA;

EID: 0037302315     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO.2003.93.2.219     Document Type: Article

References (32)

1. Bonde, M. R., Peterson, G. L., and Maas, J. L. 1991. Isozyme comparisons for identification of Colletotrichum species pathogenic to strawberry. Phytopathology 81:1523-1528.
2. Brown, A. E., Sreenivasaprasad, S., and Timmer, L. W. 1996. Molecular characterization of slow-growing orange and key lime anthracnose strains of Colletotrichum from citrus as C. acutatum. Phytopathology 86:523-527.
3. Buddie, A. G., Martinez-Culebras, P., Bridge, P. D., Garcia, M. D., Querol, A., Cannon, P. F., and Monte, E. 1999. Molecular characterization of Colletotrichum strains derived from strawberry. Mycol. Res. 103:385-394.
4. Denoyes-Rothan, B. 1997. Etude des relations bôte-pathogène chez le couple Fraragaria x ananassa et Colletotrichum spp. Ph.D. thesis. Université de Bordeaux II, France.
5. Denoyes, B., and Baudry, A. 1995. Species identification and pathogenicity study of French Colletotrichum strains isolated from strawberry using morphological and cultural characteristics. Phytopathology 85:53-57.
6. Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791.
7. Freeman, S., and Katan, T. 1997. Identification of Colletotrichum species responsible for anthracnose and root necrosis of strawberry in Israel. Phytopathology 87:516-521.
8. Freeman, S., Katan, T., and Shabi, E. 1998. Characterization of Colletotrichum species responsible for anthracnose diseases of various fruits. Plant Dis. 82:596-605.
9. Freeman, S., Minz, D., Maymon, M., and, Zveibil, A. 2001. Genetic diversity within Colletotrichum acutatum sensu Simmonds. Phytopathology 91:586-592.
10. Freeman, S., and Rodriguez, R. J. 1995. Differentiation of Colletotrichum species responsible for anthracnose of strawberry by arbitrarily primed PCR. Mycol. Res. 99:501-504.
11. Freeman, S., Shabi, E., and Katan, T. 2000. Characterization of Colletotrichum acutatum causing anthracnose disease of anemone. Appl. Environ. Microbiol. 66:5267-5272.
12. Gunnell, P. S., and Gubler, W. D. 1992. Taxonomy and morphology of Colletotrichum species pathogenic to strawberry. Mycologia 84:157-165.
13. Hayden, H. L, Pegg, K. G., Aitken, E. A. B., and Irwin, J. A. G. 1994. Genetic relationship as assessed by molecular markers and cross-infection among strains of Colletotrichum gloeosporioides. Aust. J. Bot. 42:9-18.
14. Hodson, A., Mills, P. R., and Brown, A. E. 1993. Ribosomal and mitochondrial DNA polymorphisms in Colletotrichum gloeosporioides isolated from tropical fruits. Mycol. Res. 97:329-335.
15. Howard, C. M., Maas, J. L., Chandler, C. K., and Albregts, E. E. 1992. Anthracnose of strawberry caused by the Colletotrichum complex in Florida. Plant Dis. 76:976-981.
16. Journal Officiel de la République Française. 1993. Arrété du 2 septembre 1993 relatif aux exigences sanitaires des végétaux, produits végétaux et autres objets. 4 novembre 1993. Ed. Ministère de l'Agriculture et de la Pêhe.
17. Kohn, L. M. 1992. Developing new characters for fungal systematics: An experimental approach for determining the rank of resolution. Mycologia 84:139-153.
18. Lenné, J. M. 1977. A study of the biology and taxonomy of the genus Colletotrichum. Ph.D. thesis. University of Melbourne, Australia.
19. Maas, J. L. 1987. Compendium of Strawberry Diseases. The American Phytopathological Society, St. Paul, MN.
20. Martinez-Culebras, V., Barrio, E., Garcia, M. D., and Querol, A. 2000. Identification of Colletotrichum species responsible for anthracnose of strawberry based on the internal transcribed spacers of the ribosomal region. FEMS Microbiol. Lett. 189:97-101.
21. Nei, M., and Li, W. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. 76:5269-5273.
22. Perkins, D. D. 1962. Preservation of Neurospora stock cultures with anhydrous silica gel. Can. J. Microbiol. 8:591-594.
23. Saghai-Maroof, M. A., Soliman, K. M., Jorgensen, R. A., and Allard, R. W. 1984. Ribosomal DNA spacer-length polymorphism in barley: Mendelian inheritance, chromosomal location, and population dynamics. Proc. Natl. Acad. Sci. USA 81:8014:8018.
24. Smith, B. J., and Black, L. L. 1990. Morphological, cultural, and pathogenic variation among Colletotrichum species isolated from strawberry. Plant Dis. 74:69-76.
25. Sokal, R. R., and Michener, C. D. 1958. A statistical method for evaluating systematic relationships. Univ. Kans. Sci. Bull. 38:1409-1438.
26. Sreenivasaprasad, S., Brown, A. E., and Mills, P. R. 1992. DNA sequence variation and interrelationships among Colletotrichum species causing strawberry anthracnose. Physiol. Mol. Plant Pathol. 41:265-281.
27. Sreenivasaprasad, S., Mills, P. R., Meehan, B. M., and Brown, A. E. 1996. Phylogeny and systematics of 18 Colletotrichum species based on ribosomal DNA spacer sequences. Genome 39:499-512.
28. Strunk, O., Ludwig, W., Gross, O., Reichel, B., Stuckmann, N., May, M., Nonhoff, B., Lenke, M., Ginhart, T., Vilbig, A., and Westran, R. 1998. ARB-A software environment for sequence data. Technische Universität München, Munich, Germany.
29. Sutton, B. C. 1980. The Coelomycetes Fungi Imperfecti with Pycnidia, Acervuli and Stromata. CMI, Kew, Surrey, UK.
30. Welsh, J., and McClelland, M. 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res. 18:7213-7218.
31. Williams, J. G. K., Kubelick, A, R., Livak, K. J., Rafalski, J. A., and Tingey, S. V. 1990. DNA polymorphism amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18:6531-6535.
32. White, T. J., Bruns, T., Lee, S., and Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pages 315-322 in: PCR Protocols, A Guide to Methods and Applications. M. A. Innis, D. H. Gelfand, and J. J. Sninsky, eds. Academic Press, San Diego, CA.