Molecular characterization of polyphosphate kinase (ppk) gene from Serratia marcescens

Biotechnology Letters

Volumn 25, Issue 3, 2003, Pages 191-197

  Lee, Seung Jin ^a   Song, Ok Ryul ^a   Lee, Young Choon ^a   Choi, Yong Lark ^a  

^a Dong A University   (South Korea)

Author keywords

Cloning; Expression; pho box; PolyP; ppk gene; Serratia marcescens

Indexed keywords

PHOSPHOTRANSFERASE; POLYPHOSPHATE KINASE;

AMINO ACID SEQUENCE; ARTICLE; BIOSYNTHESIS; CHEMICAL STRUCTURE; CHEMISTRY; DNA SEQUENCE; ENZYME ACTIVATION; ENZYMOLOGY; ESCHERICHIA COLI; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; ISOLATION AND PURIFICATION; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; SEQUENCE ANALYSIS; SERRATIA MARCESCENS;

AMINO ACID SEQUENCE; BASE SEQUENCE; CLONING, MOLECULAR; ENZYME ACTIVATION; ESCHERICHIA COLI; GENE EXPRESSION REGULATION, BACTERIAL; GENE EXPRESSION REGULATION, ENZYMOLOGIC; MOLECULAR SEQUENCE DATA; MOLECULAR STRUCTURE; PHOSPHOTRANSFERASES (PHOSPHATE GROUP ACCEPTOR); SEQUENCE ANALYSIS, DNA; SEQUENCE ANALYSIS, PROTEIN; SERRATIA MARCESCENS;

ESCHERICHIA COLI; PROKARYOTA; SERRATIA MARCESCENS;

EID: 0037298466     PISSN: 01415492     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1022386514487     Document Type: Article

References (28)

1. Akiyama M, Crooke E, Kornberg A (1992) The polyphosphate kinase gene of Escherichia coli; isolation and sequence of the ppk gene and membrane location of the protein. J. Biol. Chem. 267: 22556-22561.
2. Akiyama M, Crooke E, Kornberg A (1993) An exopolyphosphatase of Escherichia coli. The enzyme and its ppx gene in a polyphosphate operon. J. Biol. Chem. 268: 633-639.
3. Birnbaum HC, Doly J (1979) A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucl. Acid Res. 7: 1513-1523.
4. Blum E, Py BJ, Carpousis AJ, Higgins CF (1997) Polyphosphate kinase is a component of the Escherichia coli RNA degradosome. Mol. Microbiol. 26: 387-398.
5. Bo DC, Busby S, Buc H (1984) Cyclic AMP receptor protein: role in transcriptional activation. Science 224: 831-838.
6. Choi YL, Kawase S, Kawamukai MR, Sakai H, Komano T (1991) Regulation of glpD and glpE gene expression by cAMP-CRP complex in E. coli. Biochim. Biophys. Acta 1088: 31-35.
7. Cox GB, Rosenberg H, Downie JA, Silver S (1981) Genetic analysis of mutants affected in the Pst inorganic phosphate transport system. J. Bacteriol. 148: 1-9.
8. Crooke E, Akiyama M, Rao NN, Konberg A (1994) Genetically altered levels of inorganic polyphosphate in Escherichia coli J. Biol. Chem. 269: 6290-6295.
9. Gal SW, Choi YJ, Kim CY, Cheong YH, Choi YJ, Bahk JD, Cho MJ (1998) Cloning of the 52-kDa chitinase gene from Serratia marcescens KCTC 2172 and its proteolytic cleavage into an active 35-kDa enzyme. FEMS Microbiol. Lett. 60: 151-158.
10. Geißdorfer W, Ratajczak A, Hillen W (1998) Transcription of ppk from Acinetobacter sp. strain ADP1, encoding a putative polyphosphate kinase, is induced by phosphate starvation. Appl. Environ. Microbiol. 64: 896-901.
11. Jenkins D, Tandoi V (1991) The applied microbiology of enhanced biological phosphate removal-accomplishments and needs. Water Res. 25: 1471-1478.
12. Kato J, Yamamoto T, Yamada K, Ohtake H (1993a) Cloning, sequence and characterization of the polyphosphate kinase-encoding gene (ppk) of Klebsiella aerogenes. Gene 137: 237-242.
13. Kato J, Yamada K, Muramatsu A, Hardoyo, Ohtake H (1993b) Genetic improvement of Escherichia coli for enhanced biological removal of phosphate from wastewater. Appl. Environ. Microbiol. 59: 3744-3749.
14. Kawamukai M, Utsami R, Takeda K, Higashi R, Matsuda H, Choi YL, Komano T (1991) Nucleotide sequence and characterization of the sfs1 gene: the sfs1 gene is involved in the crp* dependent mal gene expression of E. coli. J. Bacteriol. 173: 2644-2648.
15. Keasling JD, Bertsch L, Kornberg A (1993) Guanosine pentaphosphate phosphohydrolase of Escherichia coli is a long-chain exopolyphosphatase. Proc. Natl. Acad. Sci. USA 90: 7029-7033.
16. Kulakovskaya TV, Andreeva NA, Karpov AV, Sidorov IA, Kulaev IS (1999) Hydrolysis of triphosphate by purified exopolyphosphatase from Saccaromyces cerevisiae cytosol: kinetic model. Biochemistry (Moscow) 64: 990-993.
17. Kumble KD, Ahn K, Kornberg A (1996) Phosphohistidyl active sites in polyphosphate kinase of Escherichia coli. Proc. Natl. Acad. Sci. USA 93: 14391-14395.
18. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680-685.
19. Miller JH (1972) Experiments in Molecular Genetics. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
20. Rose IA (1955) Acetate kinase of bacteria (acetokinase). Meth. Enzymol. 1: 591-593.
21. Sambrook JE, Fritsch F, Maniatis T (1989) Molecular Cloning: A Laboratory Manual, 2nd edn., Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press.
22. Sanger FS, Nicklen, Coulson AR (1977) DNA sequencing with chain-terminating inhibitor. Proc. Natl. Acad. Sci. USA 74: 5463-5467.
23. Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98, 503-517.
24. Stephen J, Dien V, Keyhani S, Yang C, Keasling JD (1997) Manipulation of independent synthesis and degradation of polyphosphate in Escherichia coli for investigation of phosphate secretion from the cell. Appl. Environ. Microbiol. 63: 1689-1695.
25. Ubukata Y, Takii S (1994) Induction ability of excess phosphate accumulation for phosphate removing bacteria. Water Res. 28: 247-249.
26. Ullmann A, Danchin A (1983) Role of cyclic AMP in bacteria. Adv. Cyclic Nucleotide Res. 15: 1-53.
27. Yoo JS, Kim HS, Chung SY, Choi YL (2000) Molecular characterization of crp, the Cyclic AMP Receptor protein Gene of Serratia marcescens KCTC 2172. J. Microbiol. Biotechnol. 10: 670-676.
28. Zago A, Chugani S, Chakrabarly AM (1999) Cloning and characterization of polyphosphate kinase and exopolyphosphatase genes from Pseudomonas aeruginosa 8830. Appl. Environ. Microbiol. 65: 2065-2071.