Mistranslational errors associated with the rare arginine codon CGG in Escherichia coli

Protein Expression and Purification

Volumn 27, Issue 2, 2003, Pages 365-374

  McNulty, Dean E ^a   Claffee, Brett A ^a   Huddleston, Michael J ^a   Kane, James F ^a  

^a GLAXOSMITHKLINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARGININE; BASE SEQUENCE; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; CLONING, MOLECULAR; CODON; DNA, COMPLEMENTARY; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ESCHERICHIA COLI; FRAMESHIFT MUTATION; GENETIC VECTORS; GLUTAMINE; HERPESVIRUS 2, HUMAN; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; MUTATION, MISSENSE; PROTEIN BIOSYNTHESIS; PROTEIN STRUCTURE, TERTIARY; RECOMBINANT PROTEINS; RNA, MESSENGER; RNA, TRANSFER; TIME FACTORS;

ESCHERICHIA COLI; HERPES; HUMAN HERPESVIRUS 2;

EID: 0037297122     PISSN: 10465928     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1046-5928(02)00610-1     Document Type: Article

References (21)

1. J.F. Kane, S.M. Balaban, G. Bogosian, Commercial production of bovine somatotropin in Escherichia coli, in: C.S. Sikes, A.P. Wheller (Eds.), Surface Reactive Peptides and Polymers: Discovery and Commercialization, American Chemical Society, Washington, 1991, pp. 186-200.
2. T. Ikemura, Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes, J. Mol. Biol. 146 (1981) 1-21.
3. H. Dong, L. Nilsson, C.G. Kurland, Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates, J. Mol. Biol. 260 (1996) 649-663.
4. J.F. Kane, Effects of rare codon clusters on high-level expression of heterologous proteins in Escherichia coli, Curr. Opin. Biotech. 6 (1995) 494-500.
5. C. Kurland, J. Gallant, Errors of heterologous protein expression, Curr. Opin. Biotech. 7 (1996) 489-493.
6. R. Seetharam, R.A. Heeren, E.Y. Wong, S.R. Braford, B.K. Klein, S. Aykent, C.E. Kotts, K.J. Mathis, B.F. Bishop, M.J. Jennings, C.E. Smith, N.R. Siegel, Mistranslation in IGF-1 during overexpression of the protein in Escherichia coli using a synthetic gene containing low frequency codons, Biochem. Biophys. Res. Commun. 155 (1988) 518-523.
7. T.L. Calderone, R.D. Stevens, T.G. Oas, High-level misincorporation of lysine for arginine at AGA codons in a fusion protein expressed in Escherichia coli, J. Mol. Biol. 262 (1996) 407-412.
8. H.S. Lu, P.R. Fausset, L.S. Sotos, C.L. Clogston, M.F. Rohde, K.S. Stoney, A.C. Herman, Isolation and characterization of three recombinant human granulocyte colony stimulating factor his-gln isoforms produced in Escherichia coli, Protein Expres. Purific. 4 (1993) 465-472.
9. R.A. Spanjaard, J. Van Duin, Translation of the sequence AGG-AGG yields 50% ribosomal frameshift, Proc. Natl. Acad. Sci. USA 85 (1988) 7967-7971.
10. J.F. Kane, B.N. Violand, D.F. Curran, N.R. Staten, K.L. Duffin, G. Bogosian, Novel in-frame two codon translational hop during synthesis of bovine placental lactogen in a recombinant strain of Escherichia coli, Nucleic Acids Res. 20 (1992) 6707-6712.
11. M. Gao, L. Matusick-Kumar, W. Hurlburt, S.F. DiTusa, W.W. Newcomb, J.C. Brown, P.J. McCann, I. Deckman, R.J. Colonno, The protease of herpes simplex virus type 1 is essential for functional capsid formation and viral growth, J. Virol. 68 (1994) 3702-3712.
12. F. Liu, B. Roizman, Characterization of the protease and other products of amino-terminus-proximal cleavage of the herpes simplex virus 1 UL26 protein, J. Virol. 67 (1993) 1300-1309.
13. B.J. Del Tito Jr., J.M. Ward, J. Hodgson, C.J.L. Gershater, H. Edwards, L.A. Wysocki, F.A. Watson, G. Sathe, J.F. Kane, Effects of a minor isoleucyl tRNA on heterologous protein translation in of Escherichia coli, J. Bacteriol. 177 (1995) 7086-7091.
14. Y. Nakamura, T. Gojobori, T. Ikemura, Codon usage tabulated from the international DNA sequence databases: status for the year 2000, Nucleic Acids Res. 28 (2000).
15. R. Now, D. Drott, K. Yaeger, R. Mierendorf, Overcoming the codon bias of E. coli for enhanced protein expression, Innovations Newsletter of Novagen 12 (2001) 1-4.
16. C. Medigue, T. Rouxel, P. Vigier, A. Henaut, A. Danchin, Evidence for horizontal gene transfer in Escherichia coli speciation, J. Mol. Biol. 222 (1991) 851-856.
17. A. Henaut, A. Danchin, Analysis and predictions from Escherichia coli sequences, or E. coli in silico, in: F. Neidhardt, R. Curtiss III, J. Ingraham, E. Lin, B. Low, B. Magasanik, W. Reznikoff, M. Riley, M. Schaechter, H. Umbarger (Eds.), Escherichia coli and Salmonella typhimurium Cellular and Molecular Biology, 2, American Society for Microbiology, Washington, DC, 1996, pp. 2047-2066.
18. C.A. Scorer, M.J. Carrier, R.F. Rosenberger, Amino acid misincorporation during high-level expression of mouse epidermal growth factor in Escherichia coli, Nucleic Acids Res. 19 (1991) 3511-3516.
19. M.A.S. Santos, M.F. Tuite, New insights into mRNA decoding - implications for heterologous protein synthesis, Trends Biotechnol. 11 (1993) 500-505.
20. J. Parker, Errors and alternatives in reading the universal genetic code, Microbiol. Rev. 53 (1989) 273-298.
21. U. Brinkmann, R.E. Mattes, P. Buckel, High-level expression of recombinant genes in Escherichia coli is dependent on the availability of the dnaY gene product, Gene 85 (1989) 109-114.