Purification and characterization of the deoxynucleoside monophosphate kinase of bacteriophage T5

Protein Expression and Purification

Volumn 27, Issue 2, 2003, Pages 195-201

  Mikoulinskaia, Galina V ^a   Gubanov, Sergei I ^a   Zimin, Andrei A ^b   Kolesnikov, Igor V ^c   Feofanov, Sergei A ^a   Miroshnikov, Anatolii I ^a  

^a SHEMYAKIN OVCHINNIKOV INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

^b RUSSIAN ACADEMY OF SCIENCES   (Russian Federation)

^c INSTITUTE OF PROTEIN RESEARCH   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; AMMONIUM SULFATE; ANION EXCHANGE RESINS; BACTERIOPHAGES; CHROMATOGRAPHY, ION EXCHANGE; DEOXYRIBONUCLEOTIDES; ELECTROPHORESIS, POLYACRYLAMIDE GEL; ESCHERICHIA COLI; HYDROGEN-ION CONCENTRATION; MODELS, CHEMICAL; MOLECULAR SEQUENCE DATA; PHOSPHOTRANSFERASES (PHOSPHATE GROUP ACCEPTOR); PROTEIN STRUCTURE, TERTIARY; RESINS, SYNTHETIC; SOFTWARE; TIME FACTORS; ULTRACENTRIFUGATION;

ESCHERICHIA COLI;

EID: 0037296114     PISSN: 10465928     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1046-5928(02)00603-4     Document Type: Article

References (30)

1. M.J. Bessman, S.T. Herriott, M.J. van Bibber Orr, Purification and properties of the deoxynucleotide kinase induced by bacteriophage T5, J. Biol. Chem. 240 (1964) 439-445.
2. P.K. Tomich, C.S. Chiu, M.G. Wovcha, G.R. Greenberg, Evidence for a complex regulating the in vivo activities of early enzymes induced by bacteriophage T4, J. Biol. Chem. 249 (1974) 7613-7622.
3. J.B. Flanegan, G.R. Greenberg, Regulation of deoxyribonucleotide biosynthesis during in vivo bacteriophage T4 DNA replication. Intrinsic control of synthesis of thymine and 5-hydroxymethylcytosine deoxyribonucleotides at precise ratio found in DNA, J. Biol. Chem. 252 (1977) 3019-3027.
4. G.P. Reddy, C.K. Mathews, Functional compartmentation of DNA precursors in T4 phage-infected bacteria, J. Biol. Chem. 253 (1978) 3461-3467.
5. J.D. Manwaring, J.A. Fuchs, Relationship between deoxyribonucleoside triphosphate pools and DNA synthesis in an nrdA mutant of E. coli, J. Bacteriol. 138 (1979) 245-248.
6. C.A. Lunn, V. Piglet, Characterization of high-activity form of ribonucleoside diphosphate reductase from E. coli, J. Biol. Chem. 254 (1979) 5008-5014.
7. J.R. Allen, G.W. Lasser, D.A. Goldman, J.W. Booth, C.K. Mathews, T4 phage deoxyribonucleotide-synthesizing enzyme system, J. Biol. Chem. 258 (1983) 5746-5753.
8. L.J. Bello, M.J. Bessman, The enzymology of virus-infected bacteria. V. Phosphorylation of hydroxymethyldeoxycytidine diphosphate and deoxythymidine diphosphate in normal and bacteriophage-infected E. coli, Biochim. Biophys. Acta 72 (1963) 647-650.
9. M.J. Bessman, Deoxynucleoside monophosphate kinases, in: Methods in Enzymology, vol. VI, Academic Press, New York, London, 1963, pp. 166-177.
10. M.M. Bradford, A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding, Anal. Biochem. 72 (1976) 248-254.
11. U.K. Laemmli, Cleavage of structural proteins during the assembly of the head of bacteriophage T4, Nature 170 (1968) 5259-5268.
12. J.E. Celis, H.H. Rasmussen, P. Madsen, The human keratocytes two-dimensional gel protein database (update 1992): towards an integrated approach to the study of cell proliferation, differentiation, and skin diseases, Electrophoresis 13 (1992) 893-959.
13. T.J. Bowen, An Introduction to Ultracentrifugation, Wiley/Interscience, London, New York, Sydney, Toronto, 1971.
14. S.F. Altschul, T.L. Madden, A.A. Scheffer, J. Zhang, Z. Zhang, W. Miller, D.J. Lipman, Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Res. 25 (1997) 3389-3402.
15. F. Corpet, Multiple sequence alignment with hierarchical clustering, Nucleic Acids Res. 16 (22) (1988) 10881-10890.
16. G. Chinnadurai, D.J. McCorquodale, Dual role of gene D5 in the development of bacteriophage T5, Nature 247 (1974) 554-556.
17. K.S. Cook, A.F. Seasholtz, Identification of some bacteriophage T4 prereplicative proteins on two-dimensional gel patterns, J. Virol. 42 (1982) 767-772.
18. S. Ikeda, R.P. Swenson, D.H. Ives, Amino-terminal nucleotide-binding sequences of a Lactobacillus deoxynucleoside kinase complex isolated by novel affinity chromatography. Biochemistry 27 (1988) 8648-8652.
19. G.U. Silins, R.L. Blakeley, P.W. Riddles, Characterization of genes encoding a nucleoside monophosphate kinase and a L35 ribosomal protein from Babesia bovis, Mol. Biochem. Parasitol. 76 (1-2) (1996) 231-244.
20. L. Wiesmuller, A.A. Noegel, O. Barzu, G. Gerisch, M. Schleicher, cDNA-derived sequence of UMP-CMP kinase from Dictyostelium discoideum and expression of the enzyme in Escherichia coli, J. Biol. Chem. 265 (11) (1990) 6339-6345.
21. T. Okajima, S. Goto, K. Tanizawa, M. Tagaya, T. Fukui, H. Shimofuruya, J. Suzuki, Cloning, sequencing, and expression in Escherichia coli of cDNA encoding porcine brain UMP-CMP kinase, Biochem. J. 117 (5) (1995) 980-986.
22. S. Kaneko, Y. Miyazaki, T. Yasuda, K. Shishido, Cloning, sequence analysis and expression of the basidiomycete Lentinus edodes gene uck1, encoding UMP-CMP kinase, the homologue of Saccharomyces cerevisae URA6 gene, Gene 211 (2) (1998) 259-266.
23. L.T. Abaigar, Y.I. Yeh, A.Y. Jong, Functional and structural conservation of Schizosaccharomyces pombe dTMP kinase gene, Biochim Biophys. Acta 1132 (2) (1992) 222-224.
24. V. Chenal-Francisque, L. Tourneux, E. Carniel, P. Christova, I.L. de la Sierra, O. Barzu, A.M. Gilles, The highly similar TMP kinases of Yersinia pestis and Escherichia coli differ markedly in their AZTMP phosphorylating activity, Eur. J. Biochem. 265 (1) (1999) 112-119.
25. T. Koch, N. Lamm, W. Ruger, Sequencing, cloning and overexpression of genes of bacteriophage T4 between map positions 74.325 and 77.184, Nucleic Acids Res. 17 (11) (1989) 4392.
26. R.W. Hendrix, M.C.M. Smith, R.N. Burns, M.E. Ford, G.F. Hatfull, Evolutionary relationships among diverse bacteriophages and prophages: all the world's a phage, Proc. Natl. Acad. Sci. USA 96 (1999) 2192-2197.
27. C. Vonrhein, G.J. Schlauderer, G.E Schulz, Movie of the structural changes during a catalytic cycle of nucleoside monophosphate, Structure 3 (1995) 483-490.
28. M.J. Bessman, Deoxyribonucleotide kinases in normal and virus-infected E. coli, J. Biol. Chem. 234 (1959) 2735-2739.
29. J. Davison, F. Brunel, M. Merchez, V. Ha-Thi, Cloning of bacteriophage T5 DNA fragments, Gene 16 (1981) 99-106.
30. V.M. Kryukov, V.N. Ksenzenko, A.V. Kaliman, A.A. Bayev, Cloning and DNA sequence of the genes for two bacteriophage T5 tRNAs, FEBS Lett. 158 (1983) 123-127.