Isolation and preliminary characterization of tomato petal- and stamen-specific cDNAs from a subtracted and equilibrated cDNA library

Euphytica

Volumn 129, Issue 2, 2003, Pages 229-236

  Chmelnitsky, Inna ^a   Sobolev, Irina ^a   Barg, Rivka ^a   Shabtai, Sara ^a   Salts, Yehiam ^a  

^a VOLCANI CENTER   (Israel)

Author keywords

Anther; EST; Flower specific genes; Lycopersicon esculentum; Normalized cDNA library; Pollen

Indexed keywords

EMBRYOPHYTA; EUKARYOTA; LYCOPERSICON; LYCOPERSICON ESCULENTUM;

EID: 0037279299     PISSN: 00142336     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1021983806607     Document Type: Article

References (20)

1. Aljanabi, S., 2001. Genomics and plant breeding. Biotechnol Annu Rev 7: 195-238.
2. Altschul, S.F., L. Thomas, A. Madden, A.A. Schäffer, J. Zhang, Z. Zhang, W. Miller & D.J. Lipman, 1997. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucl Acids Res 25: 3389-3402.
3. Carninci, P., Y. Shibata, N. Hayatsu, Y. Sugahara, K. Shibata, M. Itoh, H. Konno, Y. Okazaki, M. Muramatsu & Y. Hayashizaki, 2000. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Genome Res 10: 1617-1630.
4. Diatchenko, L., S. Lukyanov, Y.F. Lau & P.D. Siebert, 1999. Suppression subtractive hybridization: a versatile method for identifying differentially expressed genes. Meth Enzymol 303: 349-380.
5. Gurskaya, N.G., L. Diatchenko, A. Chenchik, P.D. Siebert, G.L. Khaspekov, K.A. Lukyanov, L.L. Vagner, O.D. Ermolaeva, S.A. Lukyanov & E.D. Sverdlov, 1996. Equalizing cDNA subtraction based on selective suppression of polymerase chain reaction: cloning of Jurkat cell transcripts induced by phytohemaglutinin and phorbol 12-myristate 13-acetate. Anal Biochem 240: 90-97.
6. Haizel, T., T. Merkle, F. Turck & F. Nagy, 1995. Characterization of membrane-bound small GTP-binding proteins from Nicotiana tabacum. Plant Physiol 108: 59-67.
7. Harper, G., 1997. Subtractive cDNA cloning. In: E. Hansen & G. Harper (Eds.), Differentially Expressed Genes in Plants: A Bench Manual, pp. 23-44. Taylor & Francis Ltd., London.
8. Hirayama, T. & A. Oka, 1992. Novel protein kinase of Arabidopsis thaliana (APK1) that phosphorylates tyrosine, serine and threonine. Plant Mol Biol 20: 653-662.
9. Hubank, M. & D.G. Schatz, 1999. cDNA representational difference analysis: A sensitive and flexible method for identification of differentially expressed genes. Meth Enzymol 303: 325-349.
10. Kamalay, J.C. & R.B. Goldberg, 1980. Regulation of structural gene expression in tobacco. Cell 19: 935-946.
11. Kohchi, T., K. Fujishige & K. Ohyama, 1995. Construction of an equalized cDNA library from Arabidopsis thaliana. Plant J 8: 771-776.
12. Koornneef, M. & P. Stam, 2001. Changing paradigms in plant breeding. Plant Physiol 125: 156-159.
13. Laity, J.H., B.M. Lee & P.E. Wright, 2001. Zinc finger proteins: new insights into structural and functional diversity. Curr Opin Struct Biol 11: 39-46.
14. Lindbo, J.A., W.P. Fitzmaurice & G. della-Cioppa, 2001. Virus-mediated reprogramming of gene expression in plants. Curr Opin Plant Biol 4: 181-185.
15. Ohlrogge, J. & C. Benning, 2000. Unraveling plant metabolism by EST analysis. Curr Opin Plant Biol 3: 224-228.
16. Patanjali, S.R., S. Parimoo & S.M. Weissman, 1991. Construction of a uniform-abundance normalized cDNA library. Proc Natl Acad Sci USA 88: 1943-1947.
17. Quackenbush, J., F. Liang, G. Holt, G. Pertea & J. Upton, 2000. The TIGR Gene Indices: reconstruction and representation of expressed gene sequences. Nucl Acids Res 28: 141-145.
18. Quackenbush, J., J. Cho, D. Lee, F. Liang, I. Holt, S. Karamycheva, B. Parvizi, G. Pertea, R. Sultana & J. White, 2001. The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species. Nucl Acids Res 29: 159-164.
19. Sambrook, J., E.F. Fritsch & T. Maniatis, 1989. Molecular Cloning. A Laboratory Manual. Second edition. Cold Spring Harbor Laboratory Press, NY.
20. Zarsky, V., F. Cvrckova, F. Bischoff & K. Palme, 1997. At-GDI1 from Arabidopsis thaliana encodes a rab-specific GDP dissociation inhibitor that complements the sec19 mutation of Saccharomyces cerevisiae. FEBS Lett 403: 303-308.