-
1
-
-
0033863669
-
High-throughput screening: New technology for the 21st century
-
Hertzberg RP, Pope AJ. High-throughput screening: new technology for the 21st century. Curr Opin Chem Biol 2000;4:445-451.
-
(2000)
Curr Opin Chem Biol
, vol.4
, pp. 445-451
-
-
Hertzberg, R.P.1
Pope, A.J.2
-
2
-
-
0032175112
-
Technological advances in high-throughput screening
-
Fernandes PB. Technological advances in high-throughput screening. Curr Opin Chem Biol 1998;2:597-603.
-
(1998)
Curr Opin Chem Biol
, vol.2
, pp. 597-603
-
-
Fernandes, P.B.1
-
3
-
-
0002770488
-
Shifting the bottlenecks: HTS matures
-
Ullmann D. Shifting the bottlenecks: HTS matures. Drug Discov Today (Suppl) 2001;6:S15-S16.
-
(2001)
Drug Discov Today (Suppl)
, vol.6
, pp. S15-S16
-
-
Ullmann, D.1
-
4
-
-
0035369725
-
Miniaturized HTS technologies- uHTS
-
Wolcke J, Ullmann D. Miniaturized HTS technologies- uHTS. Drug Discov Today 2001;6:637-646.
-
(2001)
Drug Discov Today
, vol.6
, pp. 637-646
-
-
Wolcke, J.1
Ullmann, D.2
-
5
-
-
0033003760
-
A simple statistical parameter for use in evaluation and validation of high throughput screening assays
-
Zhang JH, Chung TD, Oldenburg KR. A simple statistical parameter for use in evaluation and validation of high throughput screening assays. J Biomol Screen 1999;4:67-73.
-
(1999)
J Biomol Screen
, vol.4
, pp. 67-73
-
-
Zhang, J.H.1
Chung, T.D.2
Oldenburg, K.R.3
-
6
-
-
0034181706
-
Confirmation of primary active substances from high throughput screening of chemical and biological populations: A statistical approach and practical considerations
-
Zhang JH, Chung TD, Oldenburg KR. Confirmation of primary active substances from high throughput screening of chemical and biological populations: a statistical approach and practical considerations. J Comb Chem 2000;2:258-265.
-
(2000)
J Comb Chem
, vol.2
, pp. 258-265
-
-
Zhang, J.H.1
Chung, T.D.2
Oldenburg, K.R.3
-
7
-
-
0024491426
-
Recent advances in comparative molecular field analysis (CoMFA)
-
Cramer RD III, Patterson DE, Bunce JD. Recent advances in comparative molecular field analysis (CoMFA). Prog Clin Biol Res 1989;291:161-165.
-
(1989)
Prog Clin Biol Res
, vol.291
, pp. 161-165
-
-
Cramer, R.D.1
Patterson, D.E.2
Bunce, J.D.3
-
9
-
-
0033217466
-
Analysis of a large structure/biological activity data set using recursive partitioning
-
Rusinko A, Farmen MW, Lambert CG, Brown PL, Young SS. Analysis of a large structure/biological activity data set using recursive partitioning. J Chem Inf Comput Sci 1999;39:1017-1026.
-
(1999)
J Chem Inf Comput Sci
, vol.39
, pp. 1017-1026
-
-
Rusinko A1
Farmen, M.W.2
Lambert, C.G.3
Brown, P.L.4
Young, S.S.5
-
10
-
-
0032619434
-
Binary quantitative structure-activity relationship (QSAR) analysis of estrogen receptor ligands
-
Gao H, Williams C, Labute P, Bajorath J. Binary quantitative structure-activity relationship (QSAR) analysis of estrogen receptor ligands. J Chem Inf Comput Sci 1999;39:164-168.
-
(1999)
J Chem Inf Comput Sci
, vol.39
, pp. 164-168
-
-
Gao, H.1
Williams, C.2
Labute, P.3
Bajorath, J.4
-
11
-
-
0033952257
-
Extraction of pharmacophore information from high-throughput screens
-
Hopfinger AJ, Duca JS. Extraction of pharmacophore information from high-throughput screens. Curr Opin Biotech 2000;11:97-103.
-
(2000)
Curr Opin Biotech
, vol.11
, pp. 97-103
-
-
Hopfinger, A.J.1
Duca, J.S.2
-
12
-
-
0035345246
-
Retrospective analysis of an experimental high-throughput screening data set by recursive partitioning
-
van Rhee AM, Stocker J, Printzenhoff D, Creech C, Wagoner PK, Spear KL. Retrospective analysis of an experimental high-throughput screening data set by recursive partitioning. J Comb Chem 2001;3:267-277.
-
(2001)
J Comb Chem
, vol.3
, pp. 267-277
-
-
Van Rhee, A.M.1
Stocker, J.2
Printzenhoff, D.3
Creech, C.4
Wagoner, P.K.5
Spear, K.L.6
-
13
-
-
0035416113
-
Visual and computational analysis of structure-activity relationships in high-throughput screening data
-
Gedeck P, Willett P. Visual and computational analysis of structure-activity relationships in high-throughput screening data. Curr Opin Chem Biol 2001;5:389-395.
-
(2001)
Curr Opin Chem Biol
, vol.5
, pp. 389-395
-
-
Gedeck, P.1
Willett, P.2
-
14
-
-
0037019264
-
Data analysis of high-throughput screening results: Application of multidomain clustering to the NCI anti-HIV data set
-
Tamura SY, Bacha PA, Gruver HS, Nutt RF. Data analysis of high-throughput screening results: application of multidomain clustering to the NCI anti-HIV data set. J Med Chem 2002;45: 3082-3093.
-
(2002)
J Med Chem
, vol.45
, pp. 3082-3093
-
-
Tamura, S.Y.1
Bacha, P.A.2
Gruver, H.S.3
Nutt, R.F.4
-
15
-
-
0030756360
-
Reactive compounds and in vitro false positives in HTS
-
Rishton GM. Reactive compounds and in vitro false positives in HTS. Drug Discov Today 1997;2:382-384.
-
(1997)
Drug Discov Today
, vol.2
, pp. 382-384
-
-
Rishton, G.M.1
-
16
-
-
0032721827
-
Time-resolved fluorescence energy transfer DNA helicase assays for high throughput screening
-
Earnshaw DL, Moore KJ, Greenwood CJ, Djaballah H, Jurewicz AJ, Murray KJ, Pope AJ. Time-resolved fluorescence energy transfer DNA helicase assays for high throughput screening. J Biomol Screen 1999;4:239-248.
-
(1999)
J Biomol Screen
, vol.4
, pp. 239-248
-
-
Earnshaw, D.L.1
Moore, K.J.2
Greenwood, C.J.3
Djaballah, H.4
Jurewicz, A.J.5
Murray, K.J.6
Pope, A.J.7
-
17
-
-
0034054237
-
High throughput fluorescence polarization: A homogenous alternative to radioligand binding for cell surface receptors
-
Allen M, Reeves J, Mellor G. High throughput fluorescence polarization: a homogenous alternative to radioligand binding for cell surface receptors. J Biomol Screen 2000;5:63-69.
-
(2000)
J Biomol Screen
, vol.5
, pp. 63-69
-
-
Allen, M.1
Reeves, J.2
Mellor, G.3
-
18
-
-
17844377035
-
Identification of inhibitors of bacterial transcription/translation machinery utilizing a miniaturized 1536-well format screen
-
Kariv I, Cao H, Marvil PD, Bobkova EV, Bukhtiyarov YE, Yan TP, Patel U, Coudurier L, Chung TDY, Oldenburg KR. Identification of inhibitors of bacterial transcription/translation machinery utilizing a miniaturized 1536-well format screen. J Biomol Screen 2001;6:233-243.
-
(2001)
J Biomol Screen
, vol.6
, pp. 233-243
-
-
Kariv, I.1
Cao, H.2
Marvil, P.D.3
Bobkova, E.V.4
Bukhtiyarov, Y.E.5
Yan, T.P.6
Patel, U.7
Coudurier, L.8
Chung, T.D.Y.9
Oldenburg, K.R.10
-
19
-
-
0035416126
-
High-throughput docking for lead generation
-
Abagyan R, Totrov M. High-throughput docking for lead generation. Curr Opin Chem Biol 2001;5:375-382.
-
(2001)
Curr Opin Chem Biol
, vol.5
, pp. 375-382
-
-
Abagyan, R.1
Totrov, M.2
-
20
-
-
0036606483
-
Principles of docking: An overview of search algorithms and a guide to scoring functions
-
Halperin I, Buyong M, Wolfson H, Nussinov R. Principles of docking: an overview of search algorithms and a guide to scoring functions. Proteins 2002;47:409-443.
-
(2002)
Proteins
, vol.47
, pp. 409-443
-
-
Halperin, I.1
Buyong, M.2
Wolfson, H.3
Nussinov, R.4
-
21
-
-
0030154893
-
Hammerhead: Fast, fully automated docking of flexible ligands to protein binding sites
-
Welch W, Ruppert J, Jain AN. Hammerhead: fast, fully automated docking of flexible ligands to protein binding sites. Chem Biol 1996;3:449-462.
-
(1996)
Chem Biol
, vol.3
, pp. 449-462
-
-
Welch, W.1
Ruppert, J.2
Jain, A.N.3
-
22
-
-
0033576680
-
Consensus scoring: A method for obtaining improved hit rates from docking databases of three-dimensional structures into proteins
-
Charifson PS, Corkery JJ, Murcko MA, Walters WP. Consensus scoring: a method for obtaining improved hit rates from docking databases of three-dimensional structures into proteins. J Med Chem 1999;42:5100-5109.
-
(1999)
J Med Chem
, vol.42
, pp. 5100-5109
-
-
Charifson, P.S.1
Corkery, J.J.2
Murcko, M.A.3
Walters, W.P.4
-
23
-
-
0032708785
-
Efficacy and selectivity in flexible database docking
-
Knegtel RM, Wagener M. Efficacy and selectivity in flexible database docking. Proteins 1999;37:334-345.
-
(1999)
Proteins
, vol.37
, pp. 334-345
-
-
Knegtel, R.M.1
Wagener, M.2
-
24
-
-
0034649618
-
Protein-based virtual screening of chemical databases. 1. Evaluation of different docking/scoring combinations
-
Bissantz C, Folkers G, Rognan D. Protein-based virtual screening of chemical databases. 1. Evaluation of different docking/scoring combinations. J Med Chem 2000;43:4759-4767.
-
(2000)
J Med Chem
, vol.43
, pp. 4759-4767
-
-
Bissantz, C.1
Folkers, G.2
Rognan, D.3
-
25
-
-
0035966871
-
Detailed analysis of scoring functions for virtual screening
-
Stahl M, Rarey M. Detailed analysis of scoring functions for virtual screening. J Med Chem 2001;44:1035-1042.
-
(2001)
J Med Chem
, vol.44
, pp. 1035-1042
-
-
Stahl, M.1
Rarey, M.2
-
26
-
-
0033566211
-
Evaluation of PMF scoring in docking weak ligands to the FK506 binding protein
-
Muegge I, Martin YC, Hajduk PJ, Fesik SW. Evaluation of PMF scoring in docking weak ligands to the FK506 binding protein. J Med Chem 1999;42:2498 -2503.
-
(1999)
J Med Chem
, vol.42
, pp. 2498-2503
-
-
Muegge, I.1
Martin, Y.C.2
Hajduk, P.J.3
Fesik, S.W.4
-
27
-
-
0032828061
-
Computational approaches to structure-based ligand design
-
Joseph-McCarthy D. Computational approaches to structure-based ligand design. Pharmacol Ther 1999;84:179-191.
-
(1999)
Pharmacol Ther
, vol.84
, pp. 179-191
-
-
Joseph-McCarthy, D.1
-
28
-
-
0036007208
-
Virtual screening and fast automated docking methods
-
Schneider G, Bohm HJ. Virtual screening and fast automated docking methods. Drug Discov Today 2002;7:64-70.
-
(2002)
Drug Discov Today
, vol.7
, pp. 64-70
-
-
Schneider, G.1
Bohm, H.J.2
-
29
-
-
0001577643
-
Chemical similarity using physiochemical property descriptors
-
Kearsley SK, Sallamack S, Fluder EM, Andose JD, Mosley RT, Sheridan RP. Chemical similarity using physiochemical property descriptors. J Chem Inf Comput Sci 1996;36:118-127.
-
(1996)
J Chem Inf Comput Sci
, vol.36
, pp. 118-127
-
-
Kearsley, S.K.1
Sallamack, S.2
Fluder, E.M.3
Andose, J.D.4
Mosley, R.T.5
Sheridan, R.P.6
-
30
-
-
0003102354
-
Similarity searching in files of three-dimensional chemical structures: Evaluation of the EVA descriptor and combination of rankings using data fusion
-
Ginn CMR, Turner DB, Willett P. Similarity searching in files of three-dimensional chemical structures: evaluation of the EVA descriptor and combination of rankings using data fusion. J Chem Inf Comput Sci 1997;37:23-27.
-
(1997)
J Chem Inf Comput Sci
, vol.37
, pp. 23-27
-
-
Ginn, C.M.R.1
Turner, D.B.2
Willett, P.3
-
31
-
-
0035312864
-
Statistical potentials and scoring functions applied to protein-ligand binding
-
Gohlke H, Klebe G. Statistical potentials and scoring functions applied to protein-ligand binding. Curr Opin Struct Biol 2001;11:231-235.
-
(2001)
Curr Opin Struct Biol
, vol.11
, pp. 231-235
-
-
Gohlke, H.1
Klebe, G.2
-
32
-
-
0035811458
-
A new concept for multidimensional selection of ligand conformations (MultiSelect) and multidimensional scoring (MultiScore) of protein-ligand binding affinities
-
Terp GE, Johansen BN, Christensen IT, Jorgensen FS. A new concept for multidimensional selection of ligand conformations (MultiSelect) and multidimensional scoring (MultiScore) of protein- ligand binding affinities. J Med Chem 2001;44:2333-2343.
-
(2001)
J Med Chem
, vol.44
, pp. 2333-2343
-
-
Terp, G.E.1
Johansen, B.N.2
Christensen, I.T.3
Jorgensen, F.S.4
-
33
-
-
0035438402
-
How does consensus scoring work for virtual library screening? An idealized computer experiment
-
Wang R, Wang S. How does consensus scoring work for virtual library screening? An idealized computer experiment. J Chem Inf Comput Sci 2001;41:1422-1426.
-
(2001)
J Chem Inf Comput Sci
, vol.41
, pp. 1422-1426
-
-
Wang, R.1
Wang, S.2
-
34
-
-
0036136868
-
Consensus scoring for ligand/protein interactions
-
Clark RD, Strizhev A, Leonard JM, Blake JF, Matthew JB. Consensus scoring for ligand/protein interactions. J Mol Graph Model 2002;20:281-295.
-
(2002)
J Mol Graph Model
, vol.20
, pp. 281-295
-
-
Clark, R.D.1
Strizhev, A.2
Leonard, J.M.3
Blake, J.F.4
Matthew, J.B.5
-
35
-
-
0036606204
-
ConsDock: A new program for the consensus analysis of protein-ligand interactions
-
Paul N, Rognan D. ConsDock: a new program for the consensus analysis of protein-ligand interactions. Proteins 2002;47:521-533.
-
(2002)
Proteins
, vol.47
, pp. 521-533
-
-
Paul, N.1
Rognan, D.2
-
36
-
-
0034581968
-
High-throughput and virtual screening: Core lead discovery technologies move towards integration
-
Good AC, Krystek SR, Mason JS. High-throughput and virtual screening: core lead discovery technologies move towards integration. Drug Discov Today 2000;5:61-69.
-
(2000)
Drug Discov Today
, vol.5
, pp. 61-69
-
-
Good, A.C.1
Krystek, S.R.2
Mason, J.S.3
-
37
-
-
0036010703
-
Methods for compound selection focused on hits and application in drug discovery
-
Stahura FL, Xue L, Godden JW, Bajorath J. Methods for compound selection focused on hits and application in drug discovery. J Mol Graph Model 2002;20:439-446.
-
(2002)
J Mol Graph Model
, vol.20
, pp. 439-446
-
-
Stahura, F.L.1
Xue, L.2
Godden, J.W.3
Bajorath, J.4
-
38
-
-
0035846123
-
From hit to lead. Combining two complementary methods for focused library design. Application to mu opiate ligands
-
Poulain R, Horvath D, Bonnet B, Eckhoff C, Chapelain B, Bodinier MC, Deprez B. From hit to lead. Combining two complementary methods for focused library design. Application to mu opiate ligands. J Med Chem 2001;44:3378-3390.
-
(2001)
J Med Chem
, vol.44
, pp. 3378-3390
-
-
Poulain, R.1
Horvath, D.2
Bonnet, B.3
Eckhoff, C.4
Chapelain, B.5
Bodinier, M.C.6
Deprez, B.7
-
39
-
-
0035342434
-
High throughput docking for library design and library prioritization
-
Diller DJ, Merz KM Jr. High throughput docking for library design and library prioritization. Proteins 2001;43:113-124.
-
(2001)
Proteins
, vol.43
, pp. 113-124
-
-
Diller, D.J.1
Merz, K.M.2
-
40
-
-
0022399773
-
Isolation and characterization of angiogenin, an angiogenic protein from human carcinoma cells
-
Fett JW, Strydom DJ, Lobb RR, Alderman EM, Bethune JL, Riordan JF, Vallee BL. Isolation and characterization of angiogenin, an angiogenic protein from human carcinoma cells. Biochemistry 1985;24:5480-5486.
-
(1985)
Biochemistry
, vol.24
, pp. 5480-5486
-
-
Fett, J.W.1
Strydom, D.J.2
Lobb, R.R.3
Alderman, E.M.4
Bethune, J.L.5
Riordan, J.F.6
Vallee, B.L.7
-
41
-
-
0028297844
-
The observation of angiogenin and basic fibroblast growth factor gene expression in human colonic adenocarcinomas, gastric adenocarcinomas, and hepatocellular carcinomas
-
Li D, Bell J, Brown A, Berry CL. The observation of angiogenin and basic fibroblast growth factor gene expression in human colonic adenocarcinomas, gastric adenocarcinomas, and hepatocellular carcinomas. J Pathol 1994;172:171-175.
-
(1994)
J Pathol
, vol.172
, pp. 171-175
-
-
Li, D.1
Bell, J.2
Brown, A.3
Berry, C.L.4
-
42
-
-
0029901609
-
Increased angiogenin expression in pancreatic cancer is related to cancer aggressiveness
-
Shimoyama S, Gansauge F, Gansauge S, Negri G, Oohara T, Beger HG. Increased angiogenin expression in pancreatic cancer is related to cancer aggressiveness. Cancer Res 1996;56:2703-2706.
-
(1996)
Cancer Res
, vol.56
, pp. 2703-2706
-
-
Shimoyama, S.1
Gansauge, F.2
Gansauge, S.3
Negri, G.4
Oohara, T.5
Beger, H.G.6
-
43
-
-
0033119037
-
Hypoxia-induced up-regulation of angiogenin in human malignant melanoma
-
Hartmann A, Kunz M, Kostlin S, Gillitzer R, Toksoy A, Brocker EB, Klein CE. Hypoxia-induced up-regulation of angiogenin in human malignant melanoma. Cancer Res 1999;59:1578-1583.
-
(1999)
Cancer Res
, vol.59
, pp. 1578-1583
-
-
Hartmann, A.1
Kunz, M.2
Kostlin, S.3
Gillitzer, R.4
Toksoy, A.5
Brocker, E.B.6
Klein, C.E.7
-
44
-
-
0033565399
-
Increased angiogenin expression in the tumor tissue and serum of urothelial carcinoma patients is related to disease progression and recurrence
-
Miyake H, Hara I, Yamanaka K, Gohji K, Arakawa S, Kamidono S. Increased angiogenin expression in the tumor tissue and serum of urothelial carcinoma patients is related to disease progression and recurrence. Cancer 1999;86:316-324.
-
(1999)
Cancer
, vol.86
, pp. 316-324
-
-
Miyake, H.1
Hara, I.2
Yamanaka, K.3
Gohji, K.4
Arakawa, S.5
Kamidono, S.6
-
45
-
-
0033822949
-
Angiogenin expression in human colorectal cancer: The role of focal macrophage infiltration
-
Etoh T, Shibuta K, Barnard GF, Kitano S, Mori M. Angiogenin expression in human colorectal cancer: the role of focal macrophage infiltration. Clin Cancer Res 2000;6:3545-3551.
-
(2000)
Clin Cancer Res
, vol.6
, pp. 3545-3551
-
-
Etoh, T.1
Shibuta, K.2
Barnard, G.F.3
Kitano, S.4
Mori, M.5
-
46
-
-
0028086536
-
A monoclonal antibody to human angiogenin suppresses tumor growth in athymic mice
-
Olson KA, French TC, Vallee BL, Fett JW. A monoclonal antibody to human angiogenin suppresses tumor growth in athymic mice. Cancer Res 1994;54:4576-4579.
-
(1994)
Cancer Res
, vol.54
, pp. 4576-4579
-
-
Olson, K.A.1
French, T.C.2
Vallee, B.L.3
Fett, J.W.4
-
47
-
-
0028869431
-
Angiogenin antagonists prevent tumor growth in vivo
-
Olson KA, Fett JW, French TC, Key ME, Vallee BL. Angiogenin antagonists prevent tumor growth in vivo. Proc Natl Acad Sci USA 1995;92:442-446.
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 442-446
-
-
Olson, K.A.1
Fett, J.W.2
French, T.C.3
Key, M.E.4
Vallee, B.L.5
-
48
-
-
0035185392
-
Prevention of human prostate tumor metastasis in athymic mice by antisense targeting of human angiogenin
-
Olson KA, Byers HR, Key ME, Fett JW. Prevention of human prostate tumor metastasis in athymic mice by antisense targeting of human angiogenin. Clin Cancer Res 2001;7:3598-3605.
-
(2001)
Clin Cancer Res
, vol.7
, pp. 3598-3605
-
-
Olson, K.A.1
Byers, H.R.2
Key, M.E.3
Fett, J.W.4
-
49
-
-
0022403380
-
Amino acid sequence of human tumor derived angiogenin
-
Strydom DJ, Fett JW, Lobb RR, Alderman EM, Bethune JL, Riordan JF, Vallee BL. Amino acid sequence of human tumor derived angiogenin. Biochemistry 1985;24:5486-5494.
-
(1985)
Biochemistry
, vol.24
, pp. 5486-5494
-
-
Strydom, D.J.1
Fett, J.W.2
Lobb, R.R.3
Alderman, E.M.4
Bethune, J.L.5
Riordan, J.F.6
Vallee, B.L.7
-
50
-
-
0028262928
-
Crystal structure of human angiogenin reveals the structural basis for its functional divergence from ribonuclease
-
Acharya KR, Shapiro R, Allen SC, Riordan JF, Vallee BL. Crystal structure of human angiogenin reveals the structural basis for its functional divergence from ribonuclease. Proc Natl Acad Sci USA 1994;91:2915-2919.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 2915-2919
-
-
Acharya, K.R.1
Shapiro, R.2
Allen, S.C.3
Riordan, J.F.4
Vallee, B.L.5
-
51
-
-
0033593472
-
Refined crystal structures of native human angiogenin and two active site variants: Implications for the unique functional properties of an enzyme involved in neovascularisation during tumour growth
-
Leonidas DD, Shapiro R, Allen SC, Subbarao GV, Veluraja K, Acharya KR. Refined crystal structures of native human angiogenin and two active site variants: implications for the unique functional properties of an enzyme involved in neovascularisation during tumour growth. J Mol Biol 1999;285:1209-1233.
-
(1999)
J Mol Biol
, vol.285
, pp. 1209-1233
-
-
Leonidas, D.D.1
Shapiro, R.2
Allen, S.C.3
Subbarao, G.V.4
Veluraja, K.5
Acharya, K.R.6
-
52
-
-
0022497178
-
Characteristic ribonucleolytic activity of human angiogenin
-
Shapiro R, Riordan JF, Vallee BL. Characteristic ribonucleolytic activity of human angiogenin. Biochemistry 1986;25:3527-3532.
-
(1986)
Biochemistry
, vol.25
, pp. 3527-3532
-
-
Shapiro, R.1
Riordan, J.F.2
Vallee, B.L.3
-
53
-
-
0024435026
-
Site-directed mutagenesis of histidine-13 and histidine-114 of human angiogenin. Alanine derivatives inhibit angiogenin-induced angiogenesis
-
Shapiro R, Vallee BL. Site-directed mutagenesis of histidine-13 and histidine-114 of human angiogenin. Alanine derivatives inhibit angiogenin-induced angiogenesis. Biochemistry 1989;28:7401-7408.
-
(1989)
Biochemistry
, vol.28
, pp. 7401-7408
-
-
Shapiro, R.1
Vallee, B.L.2
-
54
-
-
0024522906
-
Role of lysines in human angiogenin: Chemical modification and site-directed mutagenesis
-
Shapiro R, Fox EA, Riordan JF. Role of lysines in human angiogenin: chemical modification and site-directed mutagenesis. Biochemistry 1989;28:1726-1732.
-
(1989)
Biochemistry
, vol.28
, pp. 1726-1732
-
-
Shapiro, R.1
Fox, E.A.2
Riordan, J.F.3
-
55
-
-
0030052840
-
A combined kinetic and modeling study of the catalytic center subsites of human angiogenin
-
Russo N, Acharya KR, Vallee BL, Shapiro R. A combined kinetic and modeling study of the catalytic center subsites of human angiogenin. Proc Natl Acad Sci USA 1996;93:804-808.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 804-808
-
-
Russo, N.1
Acharya, K.R.2
Vallee, B.L.3
Shapiro, R.4
-
56
-
-
0034803941
-
Small molecule inhibitors of RNase A and related enzymes
-
Russo A, Acharya KR, Shapiro R. Small molecule inhibitors of RNase A and related enzymes. Methods Enzymol 2001;341:629-648.
-
(2001)
Methods Enzymol
, vol.341
, pp. 629-648
-
-
Russo, A.1
Acharya, K.R.2
Shapiro, R.3
-
57
-
-
0033568093
-
Hypersensitive substrate for ribonucleases
-
Kelemen BR, Klink TA, Behlke MA, Eubanks SR, Leland PA, Raines RT. Hypersensitive substrate for ribonucleases. Nucleic Acids Res 1999;27:3696-3701.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 3696-3701
-
-
Kelemen, B.R.1
Klink, T.A.2
Behlke, M.A.3
Eubanks, S.R.4
Leland, P.A.5
Raines, R.T.6
-
58
-
-
0037162499
-
A small-molecule inhibitor of the ribonucleolytic activity of human angiogenin that possesses antitumor activity
-
Kao RYT, Jenkins JL, Olson KA, Key ME, Fett JW, Shapiro R. A small-molecule inhibitor of the ribonucleolytic activity of human angiogenin that possesses antitumor activity. Proc Natl Acad Sci USA 2002;99:10066-10071.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 10066-10071
-
-
Kao, R.Y.T.1
Jenkins, J.L.2
Olson, K.A.3
Key, M.E.4
Fett, J.W.5
Shapiro, R.6
-
60
-
-
0034913990
-
Binding of phosphate and pyrophosphate ions at the active site of human angiogenin as revealed by X-ray crystallography
-
Leonidas DD, Chavali GB, Jardine AM, Li S, Shapiro R, Acharya KR. Binding of phosphate and pyrophosphate ions at the active site of human angiogenin as revealed by X-ray crystallography. Protein Sci 2001;10:1669-1676.
-
(2001)
Protein Sci
, vol.10
, pp. 1669-1676
-
-
Leonidas, D.D.1
Chavali, G.B.2
Jardine, A.M.3
Li, S.4
Shapiro, R.5
Acharya, K.R.6
-
61
-
-
0031297617
-
Critical evaluation of the research docking program for the CASP2 challenge
-
Hart TN, Ness SR, Read RJ. Critical evaluation of the research docking program for the CASP2 challenge. Proteins 1997;Suppl:205-209.
-
(1997)
Proteins
, pp. 205-209
-
-
Hart, T.N.1
Ness, S.R.2
Read, R.J.3
-
62
-
-
0028454828
-
The development of a simple empirical scoring function to estimate the binding constant for a protein-ligand complex of known three-dimensional structure
-
Bohm HJ. The development of a simple empirical scoring function to estimate the binding constant for a protein-ligand complex of known three-dimensional structure. J Comput Aid Mol Des 1994;8:243-256.
-
(1994)
J Comput Aid Mol Des
, vol.8
, pp. 243-256
-
-
Bohm, H.J.1
-
63
-
-
0031552362
-
Development and validation of a genetic algorithm for flexible docking
-
Jones G, Willett P, Glen RC, Leach AR, Taylor R. Development and validation of a genetic algorithm for flexible docking. J Mol Biol 1997;267:727-748.
-
(1997)
J Mol Biol
, vol.267
, pp. 727-748
-
-
Jones, G.1
Willett, P.2
Glen, R.C.3
Leach, A.R.4
Taylor, R.5
-
64
-
-
0002387939
-
Recent advances in the prediction of binding free energy
-
Charifson PS, editor. New York: Marcel Dekker, Inc.
-
Ajay, Murcko MA, Stouten PFW. Recent advances in the prediction of binding free energy. In: Charifson PS, editor. Practical application of computer-aided drug design. New York: Marcel Dekker, Inc.; 1997;355-410.
-
(1997)
Practical Application of Computer-aided Drug Design
, pp. 355-410
-
-
Ajay1
Murcko, M.A.2
Stouten, P.F.W.3
-
65
-
-
0032112137
-
Prediction of binding constants of protein ligands: A fast method for the prioritization of hits obtained from de novo design or 3D database search programs
-
Bohm HJ. Prediction of binding constants of protein ligands: a fast method for the prioritization of hits obtained from de novo design or 3D database search programs. J Comput Aid Mol Des 1998;12:309-323.
-
(1998)
J Comput Aid Mol Des
, vol.12
, pp. 309-323
-
-
Bohm, H.J.1
-
66
-
-
0002763063
-
Metric for analyzing hit lists and pharmacophores
-
Guner OF, editor. La Jolla: IUL Biotechnology Series
-
Guner OF, Henry DR. Metric for analyzing hit lists and pharmacophores. In: Guner OF, editor. Pharmacophore perception, development, and use in drug design. La Jolla: IUL Biotechnology Series; 2000. p 193-210.
-
(2000)
Pharmacophore Perception, Development, and Use in Drug Design
, pp. 193-210
-
-
Guner, O.F.1
Henry, D.R.2
-
67
-
-
0037061628
-
A common mechanism underlying promiscuous inhibitors from virtual and high-throughput screening
-
McGovern SL, Caselli E, Grigorieff N, Shoichet BK. A common mechanism underlying promiscuous inhibitors from virtual and high-throughput screening. J Med Chem 2002;45:1712-1722.
-
(2002)
J Med Chem
, vol.45
, pp. 1712-1722
-
-
McGovern, S.L.1
Caselli, E.2
Grigorieff, N.3
Shoichet, B.K.4
-
68
-
-
0031570739
-
A high-throughput STAT binding assay using fluorescence polarization
-
Wu P, Brasseur M, Schindler U. A high-throughput STAT binding assay using fluorescence polarization. Anal Biochem 1997;249:29-36.
-
(1997)
Anal Biochem
, vol.249
, pp. 29-36
-
-
Wu, P.1
Brasseur, M.2
Schindler, U.3
-
69
-
-
18844418158
-
Development of a CD28/CD86 (B7-2) binding assay for high throughput screening by homogenous time-resolved fluorescence
-
Mellor GW, Burden MN, Preaudat M, Joseph Y, Cooksley SB, Ellis JH, Banks MN. Development of a CD28/CD86 (B7-2) binding assay for high throughput screening by homogenous time-resolved fluorescence. J Biomol Screen 1998;3:91-99.
-
(1998)
J Biomol Screen
, vol.3
, pp. 91-99
-
-
Mellor, G.W.1
Burden, M.N.2
Preaudat, M.3
Joseph, Y.4
Cooksley, S.B.5
Ellis, J.H.6
Banks, M.N.7
-
70
-
-
0031181346
-
QXP powerful, rapid computer algorithms for structure-based drug design
-
McMartin C, Bohacek RS. QXP: powerful, rapid computer algorithms for structure-based drug design. J Comput Aid Mol Des 1997;11:333-344.
-
(1997)
J Comput Aid Mol Des
, vol.11
, pp. 333-344
-
-
McMartin, C.1
Bohacek, R.S.2
-
71
-
-
0034465217
-
A method for including protein flexibility in protein-ligand docking: Improving tools for database mining and virtual screening
-
Broughton HB. A method for including protein flexibility in protein-ligand docking: improving tools for database mining and virtual screening. J Mol Graph Model 2000;18:247-257.
-
(2000)
J Mol Graph Model
, vol.18
, pp. 247-257
-
-
Broughton, H.B.1
-
72
-
-
0035957528
-
FlexE: Efficient molecular docking considering protein structure variations
-
Claussen H, Buning C, Rarey M, Lengauer T. FlexE: efficient molecular docking considering protein structure variations. J Mol Biol 2001;308:377-395.
-
(2001)
J Mol Biol
, vol.308
, pp. 377-395
-
-
Claussen, H.1
Buning, C.2
Rarey, M.3
Lengauer, T.4
-
73
-
-
0032190489
-
Screening a peptidyl database for potential ligands to proteins with side-chain flexibility
-
Schnecke V, Swanson CA, Getzoff ED, Tainer JA, Kuhn LA. Screening a peptidyl database for potential ligands to proteins with side-chain flexibility. Proteins 1998;33:74-87.
-
(1998)
Proteins
, vol.33
, pp. 74-87
-
-
Schnecke, V.1
Swanson, C.A.2
Getzoff, E.D.3
Tainer, J.A.4
Kuhn, L.A.5
-
74
-
-
0036137713
-
Automated docking to multiple target structures: Incorporation of protein mobility and structural water heterogeneity in AutoDock
-
Osterberg F, Morris GM, Sanner MF, Olson AJ, Goodsell DS. Automated docking to multiple target structures: incorporation of protein mobility and structural water heterogeneity in AutoDock. Proteins 2002;46:34-40.
-
(2002)
Proteins
, vol.46
, pp. 34-40
-
-
Osterberg, F.1
Morris, G.M.2
Sanner, M.F.3
Olson, A.J.4
Goodsell, D.S.5
-
75
-
-
0028348633
-
Role of glutamine-117 in the ribonucleolytic activity of human angiogenin
-
Russo N, Shapiro R, Acharya KR, Riordan JF, Vallee BL. Role of glutamine-117 in the ribonucleolytic activity of human angiogenin. Proc Natl Acad Sci USA 1994;91:2920-2924.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 2920-2924
-
-
Russo, N.1
Shapiro, R.2
Acharya, K.R.3
Riordan, J.F.4
Vallee, B.L.5
-
76
-
-
0025054246
-
Structure-based design of nonpeptide inhibitors specific for the human immunodeficiency virus 1 protease
-
DesJarlais RL, Seibel GL, Kuntz ID, Furth PS, Alvarez JC, Ortiz de Montellano PR, DeCamp DL, Babe LM, Craik CS. Structure-based design of nonpeptide inhibitors specific for the human immunodeficiency virus 1 protease. Proc Natl Acad Sci USA 1990;87:6644-6648.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 6644-6648
-
-
DesJarlais, R.L.1
Seibel, G.L.2
Kuntz, I.D.3
Furth, P.S.4
Alvarez, J.C.5
Ortiz de Montellano, P.R.6
DeCamp, D.L.7
Babe, L.M.8
Craik, C.S.9
-
77
-
-
0027185772
-
Structure of a non-peptide inhibitor complexed with HIV-1 protease. Developing a cycle of structure-based drug design
-
Rutenber E, Fauman EB, Keenan RJ, Fong S, Furth PS, Ortiz de Montellano PR, Meng E, Kuntz ID, DeCamp DL, Salto R, et al. Structure of a non-peptide inhibitor complexed with HIV-1 protease. Developing a cycle of structure-based drug design. J Biol Chem 1993;268:15343-15346.
-
(1993)
J Biol Chem
, vol.268
, pp. 15343-15346
-
-
Rutenber, E.1
Fauman, E.B.2
Keenan, R.J.3
Fong, S.4
Furth, P.S.5
Ortiz de Montellano, P.R.6
Meng, E.7
Kuntz, I.D.8
DeCamp, D.L.9
Salto, R.10
-
78
-
-
0033213957
-
The SHAPES strategy: An NMR-based approach for lead generation in drug discovery
-
Fejzo J, Lepre CA, Peng JW, Bemis GW, Ajay, Murcko MA, Moore JM. The SHAPES strategy: an NMR-based approach for lead generation in drug discovery. Chem Biol 1999;6:755-769.
-
(1999)
Chem Biol
, vol.6
, pp. 755-769
-
-
Fejzo, J.1
Lepre, C.A.2
Peng, J.W.3
Bemis, G.W.4
Ajay5
Murcko, M.A.6
Moore, J.M.7
-
79
-
-
0036051992
-
High-throughput crystallography for lead discovery in drug design
-
Blundell TL, Jhoit H, Abell C. High-throughput crystallography for lead discovery in drug design. Nat Rev Drug Discov 2002;1.
-
(2002)
Nat Rev Drug Discov
, pp. 1
-
-
Blundell, T.L.1
Jhoit, H.2
Abell, C.3
|