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Volumn 148, Issue 1, 2003, Pages 115-136

Genetic diversity of avian infectious bronchitis virus California variants isolated between 1988 and 2001 based on the S1 subunit of the spike glycoprotein

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; CALIFORNIA; CODON; COMPLEMENTARITY DETERMINING REGIONS; CONSERVED SEQUENCE; CORONAVIRUS INFECTIONS; HEMAGGLUTININS, VIRAL; INFECTIOUS BRONCHITIS VIRUS; MEMBRANE GLYCOPROTEINS; MOLECULAR SEQUENCE DATA; MUTATION; PHYLOGENY; POULTRY DISEASES; SEQUENCE HOMOLOGY, AMINO ACID; SEROTYPING; VARIATION (GENETICS); VIRAL ENVELOPE PROTEINS;

EID: 0037223113     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-002-0904-5     Document Type: Article
Times cited : (21)

References (41)
  • 1
    • 0002071435 scopus 로고
    • Infectious bronchitis virus
    • Hitchner SB (ed). College Station, TX, New York
    • American Association of Avian Pathologists (1980) Infectious bronchitis virus. In: Hitchner SB (ed) Isolation and Identification of Avian Pathogens, 2nd Edn. College Station, TX, New York, pp 70-71
    • (1980) Isolation and Identification of Avian Pathogens, 2nd Edn. , pp. 70-71
  • 2
    • 0031111049 scopus 로고    scopus 로고
    • A novel protein polymorphism differentiates the California serotype of infectious bronchitis from other serotypes common to California
    • Case JT, Sverlow KW, Reynolds BJ (1997) A novel protein polymorphism differentiates the California serotype of infectious bronchitis from other serotypes common to California. J Vet Diagn Invest 9(2): 149-155
    • (1997) J Vet Diagn Invest , vol.9 , Issue.2 , pp. 149-155
    • Case, J.T.1    Sverlow, K.W.2    Reynolds, B.J.3
  • 3
    • 0024083607 scopus 로고
    • Amino acids within hypervariable region 1 of avian coronavirus IBV (Massachusetts serotype) spike glycoprotein are associated with neutralization epitopes
    • Cavanagh D, Davis PJ, Mockett AP (1988) Amino acids within hypervariable region 1 of avian coronavirus IBV (Massachusetts serotype) spike glycoprotein are associated with neutralization epitopes. Virus Res 11(2): 141-150
    • (1988) Virus Res , vol.11 , Issue.2 , pp. 141-150
    • Cavanagh, D.1    Davis, P.J.2    Mockett, A.P.3
  • 4
    • 84945769565 scopus 로고
    • Infectious bronchitis virus: Evidence for recombination within the Massachussetts serotype
    • Cavanagh D, Davis PJ, Cook JKA (1992) Infectious bronchitis virus: Evidence for recombination within the Massachussetts serotype. Avian Pathology 21: 401-408
    • (1992) Avian Pathology , vol.21 , pp. 401-408
    • Cavanagh, D.1    Davis, P.J.2    Cook, J.K.A.3
  • 5
    • 84945768223 scopus 로고
    • Location of the amino acid differences in the S1 spike glycoprotein subunit of closely related serotypes of infectious bronchitis virus
    • Cavanagh D, Cook JKA, Li D, Kant A, Koch G (1992) Location of the amino acid differences in the S1 spike glycoprotein subunit of closely related serotypes of infectious bronchitis virus. Avian Pathol 21: 33-43
    • (1992) Avian Pathol , vol.21 , pp. 33-43
    • Cavanagh, D.1    Cook, J.K.A.2    Li, D.3    Kant, A.4    Koch, G.5
  • 7
    • 0002567367 scopus 로고    scopus 로고
    • Infectious bronchitis
    • Calnek BW, Barnes HJ, Beard ChW, McDougald LR, Saif YM (eds). Iowa State University Press, Ames, Iowa
    • Cavanagh DAN, Syed A (1997) Infectious bronchitis. In: Calnek BW, Barnes HJ, Beard ChW, McDougald LR, Saif YM (eds) Diseases of Poultry, 10th Edn. Iowa State University Press, Ames, Iowa, pp 511-526
    • (1997) Diseases of Poultry, 10th Edn. , pp. 511-526
    • Cavanagh, D.A.N.1    Syed, A.2
  • 8
    • 0014739651 scopus 로고
    • Studies on Australian infectious bronchitis virus. IV. Apparent farm-to-farm airborne transmission of infectious bronchitis virus
    • Cumming RB (1970) Studies on Australian infectious bronchitis virus. IV. Apparent farm-to-farm airborne transmission of infectious bronchitis virus. Avian Dis 14: 191-195
    • (1970) Avian Dis , vol.14 , pp. 191-195
    • Cumming, R.B.1
  • 9
    • 0028258693 scopus 로고
    • Estimating errors and confidence intervals for branch lengths in phylogenetic trees by a bootstrap approach
    • Dopazo J (1994) Estimating errors and confidence intervals for branch lengths in phylogenetic trees by a bootstrap approach. J Mol Evol 38: 300-304
    • (1994) J Mol Evol , vol.38 , pp. 300-304
    • Dopazo, J.1
  • 10
    • 0001483521 scopus 로고
    • Sequence space and quasispecies distribution
    • Domingo E, Holland JJ, Ahlquist P (eds). CRC Press, Boca Raton, Fla
    • Eigen M, Biebricher C (1988) Sequence space and quasispecies distribution. In: Domingo E, Holland JJ, Ahlquist P (eds) RNA genetics, vol 3. CRC Press, Boca Raton, Fla
    • (1988) RNA Genetics , vol.3
    • Eigen, M.1    Biebricher, C.2
  • 11
    • 0012245397 scopus 로고
    • Studies on the infectious bronchitits virus of chickens isolated in Finland
    • State Veterinary Medical Institute, University of Helsinki, National Veterinary Institute, Helsinki
    • Estola T (1966) Studies on the infectious bronchitits virus of chickens isolated in Finland. In: Studies on the Infectious Bronchitis Virus of Chickens Isolated in Finland. State Veterinary Medical Institute, University of Helsinki, National Veterinary Institute, Helsinki
    • (1966) Studies on the Infectious Bronchitis Virus of Chickens Isolated in Finland
    • Estola, T.1
  • 12
    • 0025994043 scopus 로고
    • Variant serotypes of infectious bronchitis virus isolated from commercial layer and broiler chickens
    • Gelb J, Wolff JB, Moran CA (1991) Variant serotypes of infectious bronchitis virus isolated from commercial layer and broiler chickens. Avian Dis 35(1): 82-87
    • (1991) Avian Dis , vol.35 , Issue.1 , pp. 82-87
    • Gelb, J.1    Wolff, J.B.2    Moran, C.A.3
  • 13
    • 0030860232 scopus 로고    scopus 로고
    • O-GLYCBASE version 2.0: A revised database of O-glycosylated proteins
    • Hansen JE, Lund O, Rapacki K, Brunak S (1997) O-GLYCBASE version 2.0: A revised database of O-glycosylated proteins. Nucleic Acids Res 24: 278-282
    • (1997) Nucleic Acids Res , vol.24 , pp. 278-282
    • Hansen, J.E.1    Lund, O.2    Rapacki, K.3    Brunak, S.4
  • 14
    • 0012331274 scopus 로고
    • Serologic investigation of suspect variant bronchitis isolates from California
    • Harless DH, Donahoe VA, Daft JP, BM (1987) Serologic investigation of suspect variant bronchitis isolates from California. Proc West Poult Dis Conf 36: 63-66
    • (1987) Proc West Poult Dis Conf , vol.36 , pp. 63-66
    • Harless, D.H.1    Donahoe, V.A.2    Daft, J.P.3
  • 16
    • 0024431579 scopus 로고
    • Virus mutation frequencies can be greatly underestimated by monoclonal antibody neutralization of virions
    • Holland JJ, de la Torre JC, Steinhauer DH, Clarke D, Duarte E, Domingo E (1989) Virus mutation frequencies can be greatly underestimated by monoclonal antibody neutralization of virions. J Virol 63(12): 5030-5036
    • (1989) J Virol , vol.63 , Issue.12 , pp. 5030-5036
    • Holland, J.J.1    De la Torre, J.C.2    Steinhauer, D.H.3    Clarke, D.4    Duarte, E.5    Domingo, E.6
  • 18
    • 0000448982 scopus 로고
    • Prediction of protein antigenic determinants from amino acid sequences
    • Hopp TP, Woods KR (1981) Prediction of protein antigenic determinants from amino acid sequences. Proc Natl Acad Sci U.S.A. 78(6): 3824-3828
    • (1981) Proc Natl Acad Sci U.S.A. , vol.78 , Issue.6 , pp. 3824-3828
    • Hopp, T.P.1    Woods, K.R.2
  • 19
    • 0025147562 scopus 로고
    • Positive Darwinian selection promotes charge profile diversity in the antigen-binding cleft of class I major-histocompatibility-complex molecules
    • Hughes AL, Ota T, Nei M (1990) Positive Darwinian selection promotes charge profile diversity in the antigen-binding cleft of class I major-histocompatibility-complex molecules. Mol Biol Evol 7(6): 515-524
    • (1990) Mol Biol Evol , vol.7 , Issue.6 , pp. 515-524
    • Hughes, A.L.1    Ota, T.2    Nei, M.3
  • 20
    • 0029015776 scopus 로고
    • Natural selection on Plasmodium surface proteins
    • Hughes MK, Hughes AL (1995) Natural selection on Plasmodium surface proteins. Mol Biochem Parasitol 71(1): 99-113
    • (1995) Mol Biochem Parasitol , vol.71 , Issue.1 , pp. 99-113
    • Hughes, M.K.1    Hughes, A.L.2
  • 21
    • 0029108556 scopus 로고
    • A novel variant of avian infectious bronchitis virus resulting from recombination among three different strains
    • Jia W, Karaca K, Parrish CR, Naqi SA (1995) A novel variant of avian infectious bronchitis virus resulting from recombination among three different strains. Arch Virol 140(2): 249-271
    • (1995) Arch Virol , vol.140 , Issue.2 , pp. 249-271
    • Jia, W.1    Karaca, K.2    Parrish, C.R.3    Naqi, S.A.4
  • 22
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • Munro HNE, Allison JB (eds). Academic Press, New York
    • Jukes TH, Cantor CR (1969) Evolution of protein molecules. In: Munro HNE, Allison JB (eds) Mammalian Protein metabolism III. Academic Press, New York
    • (1969) Mammalian Protein Metabolism III
    • Jukes, T.H.1    Cantor, C.R.2
  • 24
    • 0026936301 scopus 로고
    • Production and characterization of monoclonal antibodies to three infectious bronchitis virus serotypes
    • Karaca K, Naqi S, Gelb J (1992) Production and characterization of monoclonal antibodies to three infectious bronchitis virus serotypes. Avian Dis 36(4): 903-915
    • (1992) Avian Dis , vol.36 , Issue.4 , pp. 903-915
    • Karaca, K.1    Naqi, S.2    Gelb, J.3
  • 25
    • 0345055303 scopus 로고    scopus 로고
    • Serotype identification of avian infectious bronchitis virus by RT-PCR of the peplomer (S-1) gene
    • Keeler CL, Reed KL, Nix WA, Gelb J (1998) Serotype identification of avian infectious bronchitis virus by RT-PCR of the peplomer (S-1) gene. Avian Dis 42(2): 275-284
    • (1998) Avian Dis , vol.42 , Issue.2 , pp. 275-284
    • Keeler, C.L.1    Reed, K.L.2    Nix, W.A.3    Gelb, J.4
  • 26
    • 0017368336 scopus 로고
    • Preponderance of synonymous changes as evidence for the neutral theory of molecular evolution
    • Kimura M (1977) Preponderance of synonymous changes as evidence for the neutral theory of molecular evolution. Nature 267: 275-276
    • (1977) Nature , vol.267 , pp. 275-276
    • Kimura, M.1
  • 27
    • 0025073955 scopus 로고
    • Antigenic domains on the peplomer protein of avian infectious bronchitis virus: Correlation with biological functions
    • Koch G, Hartog L, Kant A, van Roozelaar DJ (1990) Antigenic domains on the peplomer protein of avian infectious bronchitis virus: Correlation with biological functions. J Gen Virol 71(Pt 9): 1929-1935
    • (1990) J Gen Virol , vol.71 , Issue.PART 9 , pp. 1929-1935
    • Koch, G.1    Hartog, L.2    Kant, A.3    Van Roozelaar, D.J.4
  • 28
    • 0028880390 scopus 로고
    • Experimental evidence of recombination in coronavirus infectious bronchitis virus
    • Kottier SA, Cavanagh D, Britton P (1995) Experimental evidence of recombination in coronavirus infectious bronchitis virus. Virology 213(2): 569-580
    • (1995) Virology , vol.213 , Issue.2 , pp. 569-580
    • Kottier, S.A.1    Cavanagh, D.2    Britton, P.3
  • 29
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis software
    • Kumar S, Tamura K, Jakobsen IB, Nei M (2001) MEGA2: Molecular evolutionary genetics analysis software. Bioinformatics 17(12): 1244-1245
    • (2001) Bioinformatics , vol.17 , Issue.12 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.B.3    Nei, M.4
  • 30
    • 0025670178 scopus 로고
    • Sequence evidence for RNA recombination in field isolates of avian coronavirus infectious bronchitis virus
    • Kusters JG, Jager EJ, Niesters HG, van der Zeijst BA (1990) Sequence evidence for RNA recombination in field isolates of avian coronavirus infectious bronchitis virus. Vaccine 8(6): 605-608
    • (1990) Vaccine , vol.8 , Issue.6 , pp. 605-608
    • Kusters, J.G.1    Jager, E.J.2    Niesters, H.G.3    Van der Zeijst, B.A.4
  • 33
    • 0027344606 scopus 로고
    • Differentiation of infectious bronchitis virus serotypes using polymerase chain reaction and restriction fragment length polymorphism analysis
    • Kwon HM, Jackwood MW, Gelb J (1993) Differentiation of infectious bronchitis virus serotypes using polymerase chain reaction and restriction fragment length polymorphism analysis. Avian Dis 37(1): 194-202
    • (1993) Avian Dis , vol.37 , Issue.1 , pp. 194-202
    • Kwon, H.M.1    Jackwood, M.W.2    Gelb, J.3
  • 34
    • 0021682301 scopus 로고
    • Monoclonal antibodies to the S1 spike and membrane proteins of avian infectious bronchitis coronavirus strain Massachusetts M41
    • Mockett AP, Cavanagh D, Brown TD (1984) Monoclonal antibodies to the S1 spike and membrane proteins of avian infectious bronchitis coronavirus strain Massachusetts M41. J Gen Virol 65(Pt 12): 2281-2286
    • (1984) J Gen Virol , vol.65 , Issue.PART 12 , pp. 2281-2286
    • Mockett, A.P.1    Cavanagh, D.2    Brown, T.D.3
  • 35
    • 0021367943 scopus 로고
    • Comparison of structural and functional variation in class I HLA molecules: The role of charged amino acid substitutions
    • Monos DS, Tekolf WA, Shaw S, Cooper HL (1984) Comparison of structural and functional variation in class I HLA molecules: The role of charged amino acid substitutions. J Immunol 132(3): 1379-1385
    • (1984) J Immunol , vol.132 , Issue.3 , pp. 1379-1385
    • Monos, D.S.1    Tekolf, W.A.2    Shaw, S.3    Cooper, H.L.4
  • 36
    • 0031786580 scopus 로고    scopus 로고
    • Sequence comparison of avian infectious bronchitis virus S1 glycoproteins of the Florida serotype and five variant isolates from Georgia and California
    • Moore KM, Bennett JD, Seal BS, Jackwood MW (1998) Sequence comparison of avian infectious bronchitis virus S1 glycoproteins of the Florida serotype and five variant isolates from Georgia and California. Virus Genes 17(1): 63-36
    • (1998) Virus Genes , vol.17 , Issue.1 , pp. 63-36
    • Moore, K.M.1    Bennett, J.D.2    Seal, B.S.3    Jackwood, M.W.4
  • 37
    • 0030720943 scopus 로고    scopus 로고
    • Identification of amino acids involved in a serotype and neutralization specific epitope within the S1 subunit of avian infectious bronchitis virus
    • Moore KM, Jackwood MW, Hilt DA (1997) Identification of amino acids involved in a serotype and neutralization specific epitope within the S1 subunit of avian infectious bronchitis virus. Arch Virol 142(11): 2249-2256
    • (1997) Arch Virol , vol.142 , Issue.11 , pp. 2249-2256
    • Moore, K.M.1    Jackwood, M.W.2    Hilt, D.A.3
  • 38
    • 0033828152 scopus 로고    scopus 로고
    • Emergence of subtype strains of the Arkansas serotype of infectious bronchitis virus in Delmarva broiler chickens
    • Nix WA, Troeber DS, Kingham BF, Keeler BL, Gelb J (2000) Emergence of subtype strains of the Arkansas serotype of infectious bronchitis virus in Delmarva broiler chickens. Avian Dis 44(3): 568-581
    • (2000) Avian Dis , vol.44 , Issue.3 , pp. 568-581
    • Nix, W.A.1    Troeber, D.S.2    Kingham, B.F.3    Keeler, B.L.4    Gelb, J.5
  • 39
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol Biol Evol 4(4): 406-424
    • (1987) Mol Biol Evol , vol.4 , Issue.4 , pp. 406-424
    • Saitou, N.1    Nei, M.2
  • 40
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22(22): 4673-4680
    • (1994) Nucleic Acids Res , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 41
    • 0033997199 scopus 로고    scopus 로고
    • Relationship between serotypes and genotypes based on the hypervariable region of the S1 gene of infectious bronchitis virus
    • Wang CH, Huang YC (2000) Relationship between serotypes and genotypes based on the hypervariable region of the S1 gene of infectious bronchitis virus. Arch Virol 145(2): 291-300
    • (2000) Arch Virol , vol.145 , Issue.2 , pp. 291-300
    • Wang, C.H.1    Huang, Y.C.2


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