Phylogenetic analysis of rabbit haemorrhagic disease virus in France between 1993 and 2000, and the characterisation of RHDV antigenic variants

Archives of Virology

Volumn 148, Issue 1, 2003, Pages 65-81

  Le Gall Reculé, Ghislaine ^a   Zwingelstein, F ^a   Laurent, S ^b   De Boisseson C ^c   Portejoie, Y ^d   Rasschaert, D ^b  

^a Age Francaise Sec San Aliments   (France)

^b CEMAGREF   (France)

^c Healthy Pigs Production and Experimentation Section   (France)

^d CAMSP du Maine et Loire   (France)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ANIMALS; ANIMALS, WILD; ANTIBODIES, MONOCLONAL; ANTIGENIC VARIATION; ANTIGENS, VIRAL; BASE SEQUENCE; CALICIVIRIDAE INFECTIONS; CAPSID PROTEINS; DATABASES, FACTUAL; DISEASE OUTBREAKS; EPIDEMIOLOGY, MOLECULAR; FRANCE; GENOTYPE; HEMORRHAGIC DISEASE VIRUS, RABBIT; MOLECULAR SEQUENCE DATA; MUTATION; PHYLOGENY; RABBITS; SEQUENCE HOMOLOGY, AMINO ACID;

ANIMALIA; DNA VIRUSES; ORYCTOLAGUS CUNICULUS; PROKARYOTA; RABBIT HEMORRHAGIC DISEASE VIRUS;

EID: 0037220759     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-002-0908-1     Document Type: Article

References (29)

1. Asgari S, Hardy JRE, Cooke BD (1999) Sequence analysis of rabbit haemorrhagic disease virus (RHDV) in Australia: Alterations after its release. Arch Virol 144: 135-145
2. Babcock G, Lu Z, Ward G, Lubroth J, Rock DL, Kutish GF, Neilan JG (2000) The genome of rabbit hemorrhagic disease virus (Mexico89) from Mexico. EMBL/GenBank/DDBJ Databases Direct Submission
3. Berninger M-L, House C (1995) Serologic comparison of four isolates of rabbit hemorrhagic disease virus. Vet Microbiol 47: 157-165
4. Boga J, Casais R, Marin M, Martin-Alonso J, Carmenes R, Prieto M, Parra F (1994) Molecular cloning, sequence and expression of the capsid protein gene from rabbit hemorrhagic disease virus (Spanish isolate AST/89). J Gen Virol 75: 2409-2413
5. Capucci L, Frigoli G, Ronsholt L, Lavazza A, Brocchi E, Rossi C (1995) Antigenicity of the rabbit hemorrhagic disease virus studied by its reactivity with monoclonal antibodies. Virus Res 37: 221-238
6. Capucci L, Fusi P, Lavazza A, Pacciarini ML, Rossi C (1996) Detection and preliminary characterization of a new rabbit calicivirus related to rabbit hemorrhagic disease virus but non pathogenic. J Virol 70: 8614-8623
7. Capucci L, Fallacara F, Grazioli S, Lavazza A, Pacciarini ML, Brocchi E (1998) A further step in the evolution of rabbit hemorrhagic disease virus: The appearance of the first consistent antigenic variant. Virus Res 58: 115-126
8. Felsenstein J (1993) PHYLIP (Phylogeny Interference Package), Version 3.5. Department of Genetics, University of Washington, Seattle, USA
9. Gould AR, Kattenbelt JA, Lenghaus C, Morrissy C, Chamberlain T, Collins BJ, Westbury HA (1997) The complete nucleotide sequence of rabbit haemorrhagic disease virus (Czech strain V351): Use of the polymerase chain reaction to detect replication in Australian vertebrates and analysis of viral population sequence variation. Virus Res 47: 7-17
10. Grazioli S, Agnoletti F, Scicluna MT, Masoero N, Guercio A, Fallacara F, Lavazza A, Brocchi E, Capucci L (2000) Rabbit haemorrhagic disease virus (RHDV) subtype "A" (RHDVa) is replacing the original strain in some Italian regions. In: Brocchi E, Lavazza A (eds), Fifth International Congress of the European Society for Veterinary Virology, Brescia, Italy, pp 202-203
11. th Report of the International Committee on Taxonomy of Viruses. Academic Press, Orlando, FL
12. Guittré C, Baginski I, Le Gall G, Prave M, Trépo C, Cova L (1995) Detection of rabbit haemorrhagic disease virus isolates and sequence comparison of the N-terminus of the capsid protein gene by the polymerase chain reaction. Res Vet Sci 58: 128-132
13. Laurent S, Vautherot JF, Le Gall G, Madelaine MF, Rasschaert D (1997) Structural, antigenic and immunogenic relationships between European brown hare syndrome virus and rabbit haemorrhagic disease virus. J Gen Virol 78: 2803-2811
14. Le Gall G, Arnauld C, Boilletot E, Morisse JP, Rasschaert D (1998) Molecular epidemiology of rabbit haemorrhagic disease virus outbreaks in France during 1988 to 1995. J Gen Virol 79: 11-19
15. Le Gall-Reculé G, Zwingelstein F, Portejoie Y, Le Gall G (2001) Immunocapture-RT-PCR assay for detection and molecular epidemiology studies of Rabbit Haemorrhagic Disease and European Brown Hare Syndrome viruses. J Virol Methods 97: 49-57
16. Liu SJ, Xue HP, Pu BQ, Quian NH (1984)A new viral disease in rabbits. Anim Husbandry Vet Med 16: 253-255
17. Meyers G, Wirblich C, Thiel HJ (1991) Rabbit haemorrhagic disease virus. Molecular cloning and nucleotide sequencing of a calicivirus genome. Virol 184: 664-676
18. Milton ID, Vlasak R, Nowotny N, Rodak L, Cater MJ (1992) Genomic 3′ terminal sequence of three isolates of rabbit haemorrhagic disease virus. FMS Microbiol Lett 93: 37-42
19. Neilan JG, Lu Z, Ward G, Lubroth J, Rock DL, Kutish GF (2000) The genome of rabbit hemorrhagic disease virus (Iowa 2000) from North America. EMBL/GenBank/DDBJ Databases Direct Submission
20. Neill JD (1992) Nucleotide sequence of the capsid protein gene of two serotypes of San Miguel sea lion virus: Identification of conserved and non-conserved amino acid sequences among calicivirus capsid proteins. Virus Res 24: 211-222
21. Nowotny N, Bascunana CR, Ballagi-Pordany A, Gavier-Widen D, Uhlen M, Belak S (1997) Phylogenetic analysis of rabbit haemorrhagic disease and European brown hare syndrome viruses by comparison of sequences from the capsid protein gene. Arch Virol 142: 657-673
22. Ohlinger VF, Haas B, Meyers G, Weiland F, Thiel HJ (1990) Identification and characterization of the virus causing rabbit hemorrhagic disease. J Virol 64: 3331-3336
23. Parra F, Prieto M (1990) Purification and characterization of a calicivirus as the causative agent of a lethal haemorrhagic disease in rabbits. J Virol 64: 4013-4015
24. Rasschaert D, Huguet S, Madeleine MF, Vautherot JF (1994) Sequence and genomic organization of a rabbit hemorrhagic disease virus isolate from a wild rabbit. Virus Genes 9: 121-132
25. Rodak L, Smid B, Valicek L, Versely T, Stepanek J, Hampl J, Jurak E (1990) Enzyme-linked immunosorbent assay of antibodies to rabbit haemorrhagic disease virus and determination of its major structural proteins. J Gen Virol 71: 1075-1080
26. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, pp 1659
27. Schirrmeier H, Reimann I, Köllner B, Granzow H (1999) Pathogenic, antigenic and molecular properties of rabbit haemorrhagic disease virus (RHDV) isolated from vaccinated rabbits: Detection and characterization of antigenic variants. Arch Virol 144: 719-735
28. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680
29. Vende P, Le Gall G, Rasschaert D (1995) An alternative method for direct sequencing of PCR products, for epidemiological studies performed by nucleic sequence comparison. Application to rabbit haemorrhagic disease virus. Vet Res 26: 174-179