Two approaches to mutation detection based on functional data

Statistics in Medicine

Volumn 21, Issue 22, 2002, Pages 3447-3464

  Pfeiffer, Ruth M ^a   Bura, Efstathia ^b   Smith, Amelia ^a   Rutter, Joni L ^a  

^a NATIONAL CANCER INSTITUTE   (United States)

^b GEORGE WASHINGTON UNIVERSITY   (United States)

Author keywords

Bootstrap; Classification; Mode; Non linear regression; Superpopulation model

Indexed keywords

BRCA1 PROTEIN; BRCA2 PROTEIN; DNA;

ARTICLE; CONTROLLED STUDY; DATA ANALYSIS; DNA SEQUENCE; GENE LOCATION; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC VARIABILITY; HETEROZYGOTE; HETEROZYGOTE DETECTION; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HOMOZYGOSITY; HUMAN; MUTATIONAL ANALYSIS; NORMAL DISTRIBUTION; PARAMETRIC TEST; PLOTS AND CURVES; SINGLE NUCLEOTIDE POLYMORPHISM; STATISTICAL CONCEPTS; STATISTICAL MODEL; WILD TYPE;

ALGORITHMS; BREAST NEOPLASMS; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DNA MUTATIONAL ANALYSIS; DNA, NEOPLASM; FEMALE; GENES, BRCA1; GENES, BRCA2; HUMANS; MODELS, GENETIC; POLYMERASE CHAIN REACTION;

EID: 0037202568     PISSN: 02776715     EISSN: None     Source Type: Journal    
DOI: 10.1002/sim.1269     Document Type: Article

References (13)

1. Liu W, Mai M, Yokomizo A, Qian C, Tindall DJ, Smith DI, Thibodeau SN. Differential expression and allelotyping of the p73 gene in neuroblastoma. International Journal of Oncology 2000; 16(1):181-185.
2. Seelan RS, Qian C, Yokomizo A, Bostwick DG, Smith DI, Liu W. Human acid ceramidase is overexpressed but not mutated in prostate cancer. Genes Chromosomes and Cancer 2000; 2(2):137-146.
3. Cotton RGH, Bray PJ. Using CCM and DHPLC to detect mutations in the glucocorticoid receptor in atherosclerosis: a comparison. Journal of Biochemical and Biophysical Methods 2001; 47(1-2):91-100.
4. Gross E, Kiechle M, Arnold N. Mutation analysis of p53 ovarian tumours by DHPLC. Journal of Biochemical and Biophysical Methods 2001; 47(1-2):73-81.
5. Robin S. A model for thermograms. Biometrics 1999; 55(1):37-43.
6. Kuklin A, Munson K, Gjerde D, Haefele R, Taylor P. Detection of single-nucleotide polymorphisms with the WAVE DNA fragment analysis system. Genetic Testing 1997; 1(3):201-206.
7. Ke SH, Wartell RM. Influence of nearest neighbor sequence on the stability of base pair mismatches in long DNA; determination by temperature-gradient gel electrophoresis. Nucleic Acids Research 1993; 21(22): 5137-5143.
8. Aboul-ela F, Koh D, Tinoco I, Martin FH. Base-base mismatches. Thermodynamics of double helix formation for dCA3XA3G+dCT3YT3G (X,Y=A.G.C.T). Nucleic Acids Research 1985; 13:4811-4824.
9. Rice JA, Silverman BW. Estimating the mean and covariance structure nonparametrically when the data are curves. Journal of the Royal Statistical Society, Series B 1991; 53(1):233-243.
10. Hall P, Hart JD. Bootstrap test for difference between means in nonparametric regression. Journal of the American Statistical Association 1990; 85(412):1039-1049.
11. King E, Hart JD, Wehrly TE. Testing the equality of two regression curves using linear smoothers. Statistics and Probability Letters 1991; 12(3):239-247.
12. Fan J, Lin SK. Tests of significance when the data are curves. Journal of the American Statistical Association 1998; 93(443):1007-1021.
13. Seber GAF, Wild CJ. Nonlinear Regression. Wiley: New York, 1989.