φ value analysis of heterogeneity in pathways of allosteric transitions: Evidence for parallel pathways of ATP-induced conformational changes in a GroEL ring

Proceedings of the National Academy of Sciences of the United States of America

Volumn 99, Issue 22, 2002, Pages 14095-14097

  Horovitz, Amnon ^a   Amir, Amnon ^a   Danziger, Oded ^a   Kafri, Galit ^a  

^a WEIZMANN INSTITUTE OF SCIENCE   (Israel)

Author keywords

Chaperonins; Cooperativity; Nested allostery

Indexed keywords

ADENOSINE TRIPHOSPHATE; CHAPERONIN;

ALLOSTERISM; ANALYTIC METHOD; ARTICLE; CONFORMATIONAL TRANSITION; ENERGY; MUTATION; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN STRUCTURE;

ADENOSINE TRIPHOSPHATE; ALLOSTERIC REGULATION; GROEL PROTEIN; MUTAGENESIS, SITE-DIRECTED; PROTEIN CONFORMATION;

EID: 0037195147     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.222303299     Document Type: Article

References (26)

1. Perutz, M. F. (1989) Q. Rev. Biophys. 22, 139-237.
2. Sigler, P. B., Xu, Z., Rye, H. S., Burston, S. G., Fenton, W. A. & Horwich, A. L. (1998) Annu. Rev. Biochem. 67, 581-608.
3. Thirumalai, D. & Lorimer, G. H. (2001) Annu. Rev. Biophys. Biomol. Struct. 30, 245-269.
4. Horovitz, A., Fridmann, Y., Kafri, G. & Yifrach, O. (2001) J. Struct. Biol. 135, 104-114.
5. Braig, K., Otwinowski, Z., Hegde, R., Boisvert, D. C., Joachimiak, A., Horwich, A. L. & Sigler, P. B. (1994) Nature 371, 578-586.
6. Roseman, A. M., Chen, S., White, H., Braig, K. & Saibil, H. R. (1996) Cell 87, 241-251.
7. Ranson, N. A., Farr, G. W., Roseman, A. M., Gowen, B., Fenton, W. A., Horwich, A. L. & Saibil, H. R. (2001) Cell 107, 869-879.
8. Yifrach, O. & Horovitz, A. (1995) Biochemistry 34, 5303-5308.
9. Yifrach, O. & Horovitz, A. (1996) J. Mol. Biol. 255, 356-361.
10. Xu, Z., Horwich, A. L. & Sigler, P. B. (1997) Nature 388, 741-750.
11. Leffler, J. E. (1953) Science 117, 340-341.
12. Fersht, A. R., Matouschek, A. & Serrano, L. (1992) J. Mol. Biol. 224, 771-782.
13. Fersht, A. R., Leatherbarrow, R. J. & Wells, T. N. C. (1986) Nature 322, 284-286.
14. Eaton, W. A., Henry, E. R. & Hofrichter, J. (1991) Proc. Natl. Acad. Sci. USA 88, 4472-4475.
15. Edelstein, S. J., Schaad, O., Henry, E., Bertrand, D. & Changeux, J.-P. (1996) Biol. Cybern. 75, 361-379.
16. Yifrach, O. & Horovitz, A. (1998) J. Am. Chem. Soc. 120, 13262-13263.
17. Grosman, C., Zhou, M. & Auerbach, A. (2000) Nature 403, 773-776.
18. Ma, J., Sigler, P. B., Xu, Z. & Karplus, M. (2000) J. Mol. Biol. 302, 303-313.
19. Ozkan, S. B., Bahar, I. & Dill, K. A. (2001) Nat. Struct. Biol. 8, 765-769.
20. Fersht, A. R., Itzhaki, L. S., Elmasry, N. F., Matthews, J. M. & Otzen, D. E. (1994) Proc. Natl. Acad. Sci. USA 91, 10426-10429.
21. Krantz, B. A. & Sosnick, T. R. (2001) Nat. Struct. Biol. 8, 1042-1047.
22. Monod, J., Wyman, J. & Changeux, J.-P. (1965) J. Mol. Biol. 12, 88-118.
23. Hammes, G. G. & Schimmel, P. R. (1966) J. Phys. Chem. 70, 2319-2324.
24. Horovitz, A. & Yifrach, O. (2000) Bull. Math. Biol. 62, 241-246.
25. Yifrach, O. & Horovitz, A. (1998) Biochemistry 37, 7083-7088.
26. Aharoni, A. & Horovitz, A. (1997) Proc. Natl. Acad. Sci. USA 94, 1698-1702.