Translational machinery of channel catfish: I. A transcriptomic approach to the analysis of 32 40S ribosomal protein genes and their expression

Gene

Volumn 291, Issue 1-2, 2002, Pages 177-186

  Karsi, Attila ^a   Patterson, Andrea ^a   Feng, Jinian ^a   Liu, Zhanjiang ^a  

^a AUBURN UNIVERSITY   (United States)

Author keywords

cDNA; EST; Gene expression; Ribosomal protein; Teleost; Transcriptome

Indexed keywords

RIBOSOME PROTEIN;

ARTICLE; BIOAVAILABILITY; CHANNEL CATFISH; CONTROLLED STUDY; GENE EXPRESSION; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; GENETIC VARIABILITY; GENOME; MAMMAL; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; ORTHOLOGY; PHYLOGENY; POLYADENYLATION; PRIORITY JOURNAL; RIBOSOME; STOICHIOMETRY; TELEOST; VERTEBRATE;

ALTERNATIVE SPLICING; ANIMALS; BASE SEQUENCE; BRAIN; DNA, COMPLEMENTARY; GENE EXPRESSION; ICTALURIDAE; KIDNEY; MAMMALS; MICROSATELLITE REPEATS; MOLECULAR SEQUENCE DATA; POLY A; PROTEIN BIOSYNTHESIS; PROTEIN ISOFORMS; RIBOSOMAL PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; SKIN; TRANSCRIPTION, GENETIC;

CATFISH; ICTALURUS; ICTALURUS PUNCTATUS; MAMMALIA; TELEOSTEI; VERTEBRATA;

EID: 0037193681     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(02)00595-4     Document Type: Article

References (37)

1. Complementary DNA sequencing: Expressed sequence tags and human genome project
2. Selective translational control and nonspecific posttranscriptional regulation of ribosomal protein gene expression during development and regeneration of rat liver
3. Patterns of variant polyadenylation signal usage in human genes
4. Transcriptome of channel catfish (Ictalurus punctatus): Initial analysis of genes and expression profiles from the head kidney
5. Eukaryotic start and stop translation sites
6. Zinc finger-like motifs in rat ribosomal proteins S27 and S29
7. Mechanisms and regulation of mRNA polyadenylation
8. RNA binding strategies of ribosomal proteins
9. Homologous ribosomal protein genes on the human X and Y chromosomes: Escape from X inactivation and possible implications for Turner syndrome
10. Inferring phylogenies from DNA sequences of unequal base compositions
11. Alternate polyadenylation in human mRNAs: A large scale analysis by EST clustering
12. Transcriptome analysis of channel catfish (Ictalurus punctatus): Genes and expression profile from the brain
13. Transcriptome analysis of channel catfish (Ictalurus punctatus): Initial analysis of gene expression and microsatellite-containing cDNAs in the skin
14. Molecular phylogenies based on ribosomal protein L11, L1, L10, and L12 sequences
15. Molecular phylogeny of Dictyostelium discoideum by protein sequence comparison
16. Diversity in translational regulation
17. Synthesis of the translational apparatus is regulated at the translational level
18. Translational control of ribosomal protein mRNAs in eukaryotes
19. Frequent alternative splicing of human genes
20. Translational machinery of channel catfish: Complemetary DNA and expression of the complete set of 47 60S ribosomal proteins
21. Translational control of ribosomal protein production in mammalian cells
22. Poly(A) signals
23. DNA sequencing with chain-terminating inhibitors
24. The ends of the affair: Capping and polyadenylation
25. Early evolution and the origin of eukaryotes
26. A complete map of the human ribosomal protein genes: Assignment of 80 genes to the cytogenetic map and implications for human disorders
27. Phylogenetic relationships of fungi, plantae, and animalia inferred from homologous comparison of ribosomal proteins
28. The biochemistry of polyadenylation
29. Trapping human ribosomal protein genes
30. The structure and function of eukaryotic ribosomes
31. Studies of the structure of eukaryotic (mammalian) ribosomes
32. Structure and evolution of mammalian ribosomal proteins
33. Mammalian ribosomes: The structure and the evolution of the proteins
34. The structure and evolution of the ribosomal proteins encoded in the spc operon of the archaeon (Crenarchaeota) Sulfolobus acidocaldarius
35. Structure and function of ribosomal protein S4 genes on the human and mouse sex chromosomes