Specificity analysis of the conserved hexanucleotides for the replication of bamboo mosaic potexvirus RNA

Virus Research

Volumn 83, Issue 1-2, 2002, Pages 159-167

  Chiu, Wei Wei ^a   Hsu, Yau Heiu ^a   Tsai, Ching Hsiu ^a  

^a NATIONAL CHUNG HSING UNIVERSITY   (Taiwan)

Author keywords

Bamboo mosaic potexvirus; Hexamer motif; RdRp; RNA replication

Indexed keywords

COAT PROTEIN; NUCLEOTIDE; PURINE; PYRIMIDINE; RNA; RNA DIRECTED RNA POLYMERASE; RNA POLYMERASE;

AMINO ACID SUBSTITUTION; ARTICLE; CONTROLLED STUDY; ENZYME SPECIFICITY; ESCHERICHIA COLI; GENE DELETION; GENE OVEREXPRESSION; GENETIC TRANSCRIPTION; INOCULATION; NONHUMAN; NUCLEOTIDE SEQUENCE; POTEXVIRUS; PRIORITY JOURNAL; PROTOPLAST; VIRUS REPLICATION;

3' UNTRANSLATED REGIONS; CONSERVED SEQUENCE; NUCLEIC ACID CONFORMATION; NUCLEOTIDES; PLANTS; POTEXVIRUS; PROTOPLASTS; RNA REPLICASE; RNA, VIRAL;

POTEXVIRUS;

EID: 0037176954     PISSN: 01681702     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-1702(01)00433-6     Document Type: Article

References (25)

1. Prediction of RNA secondary structure, including pseudoknotting, by computer simulation
2. Specificity of ribonucleoprotein interaction determined by RNA folding during complex formulation
3. Structure-probing of U1 snRNPs gradually depleted of the U1-specific proteins A, C and 70k. Evidence that A interacts differentially with developmentally regulated mouse U1snRNA variants
4. The entire nucleotide sequence of foxtail mosaic virus RNA
5. Structural and functional analysis of the 3′ untranslated region of bamboo mosaic potexvirus genomic RNA
6. Replication in vivo of mutant brome mosaic virus RNA defective in amimoacylation
7. Specific valylation of turnip yellow mosaic virus RNA by wheat germ valyl-tRNA synthetase determined by three anticodon loop nucleotides
8. Structural basis for recognition of the tra mRNA precursor by the sex-lethal protein
9. Sequences at the 3′ untranslated region of the bamboo mosaic potexvirus RNA interacted with the viral RNA-dependent RNA polymerase
10. Long-distance RNA-RNA interactions and conserved sequence elements affect potato virus X plus-strand RNA accumulation
11. Identification and characterization of the Escherichia coli-expressed RNA dependent RNA polymerase of bamboo mosaic virus
12. Characterization of the AdoMet-dependent guanylyltransferase activity that is associated with the N terminus of bamboo mosaic virus replicase
13. Genome properties of bamboo mosaic virus
14. Nucleotide sequence of the genomic RNA of bamboo mosaic potexvirus
15. Kissing of two predominant hairpin loops in the coxsackie B virus 3′ untranslated region is the essential structural feature of the origin of replication required for negative-strand RNA synthesis
16. Crystal structure at 1.92 Å resolution of the RNA-binding domain of the U1A spliceosomal protein complexed with an RNA hairpin
17. Towards identification of cis-acting elements involved in the replication of enterovirus RNAs: A proposal for the existence of tRNA-like terminal structures
18. The 'megaprimer' method of site directed mutagenesis
19. Identification of the RNA binding segment of human U1 A protein and definition of its binding site on U1 snRNA
20. RNA-protein interactions directed by the 3′ end of human rhinovirus genomic RNA
21. Structure-infectivity analysis of the human rhinovirus genomic RNA 3′ non-coding region
22. Turnip yellow mosaic virus RNAs with anticodon loop substitutions that result in decreased valylation fail to replicate efficiently
23. Sufficient length of a poly(A) tail for the formation of a potential pseudoknot is required for an efficient replication of bamboo mosaic potexvirus RNA
24. Mutagenesis of a hexanucleotide sequence conserved in potexvirus RNAs
25. Computer prediction of RNA structure