메뉴 건너뛰기




Volumn 3, Issue 7, 2002, Pages

CLUSFAVOR 5.0: hierarchical cluster and principal-component analysis of microarray-based transcriptional profiles

Author keywords

Hierarchical Cluster Analysis; Simulated Gene Expression; Size Displacement; Standardize Input Data; Varimax Orthogonal Rotation

Indexed keywords

ADULT; ARITHMETIC; ARTICLE; CONTROLLED STUDY; ENTROPY; FACTOR ANALYSIS; GENE EXPRESSION; HIERARCHICAL CLUSTERING; MAJOR CLINICAL STUDY; NEIGHBOR JOINING METHOD; ORTHOGONAL ROTATION; PRINCIPAL COMPONENT ANALYSIS; SIMULATION; VARIMAX ROTATION; ANIMAL; CLUSTER ANALYSIS; COMPUTER PROGRAM; DNA MICROARRAY; GENE EXPRESSION PROFILING; GENETIC TRANSCRIPTION; METHODOLOGY; STANDARD; STATISTICAL ANALYSIS;

EID: 0037166427     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2002-3-7-software0002     Document Type: Article
Times cited : (27)

References (19)
  • 1
    • 85182599530 scopus 로고    scopus 로고
    • BLAST. [http://www.ncbi.nlm.nih.gov/BLAST/]
  • 2
    • 0343069798 scopus 로고    scopus 로고
    • Statistical analysis of the 5' untranslated region of human mRNA using "Oligo-Capped" cDNA libraries
    • PID: 10756096, COI: 1:CAS:528:DC%2BD3cXit12itb8%3D
    • Suzuki Y, Ishihara D, Sasaki M, Nakagawa H, Hata H, Tsunoda T, Watanabe M, Komatsu T, Ota T, Isogai T, et al: Statistical analysis of the 5' untranslated region of human mRNA using "Oligo-Capped" cDNA libraries. Genomics. 2000, 64: 286-297. 10.1006/geno.2000.6076. DOI: 10.1006/geno.2000.6076
    • (2000) Genomics , vol.64 , pp. 286-297
    • Suzuki, Y.1    Ishihara, D.2    Sasaki, M.3    Nakagawa, H.4    Hata, H.5    Tsunoda, T.6    Watanabe, M.7    Komatsu, T.8    Ota, T.9    Isogai, T.10
  • 3
    • 0030986188 scopus 로고    scopus 로고
    • The hardwiring of development: organization and function of genomic regulatory systems
    • PID: 9169833, COI: 1:CAS:528:DyaK2sXjvV2nt7o%3D
    • Arnone MI, Davidson EH: The hardwiring of development: organization and function of genomic regulatory systems. Development. 1997, 124: 1851-1864.
    • (1997) Development , vol.124 , pp. 1851-1864
    • Arnone, M.I.1    Davidson, E.H.2
  • 4
    • 0034669669 scopus 로고    scopus 로고
    • Predicting regulons and their cis-regulatory motifs by comparative genomics
    • PID: 11071941, COI: 1:STN:280:DC%2BD3M%2FktFWisQ%3D%3D
    • Manson McGuire A, Church GM: Predicting regulons and their cis-regulatory motifs by comparative genomics. Nucleic Acids Res. 2000, 28: 4523-4530. 10.1093/nar/28.22.4523. DOI: 10.1093/nar/28.22.4523
    • (2000) Nucleic Acids Res , vol.28 , pp. 4523-4530
    • Manson McGuire, A.1    Church, G.M.2
  • 5
    • 0031630211 scopus 로고    scopus 로고
    • Genomic regulation modeled as a network with basins of attraction
    • Wuensche A: Genomic regulation modeled as a network with basins of attraction. Pac Symp Biocomput. 1998, 89-102.
    • (1998) Pac Symp Biocomput , pp. 89-102
    • Wuensche, A.1
  • 6
    • 0033736476 scopus 로고    scopus 로고
    • Genetic network inference: from co-expression clustering to reverse engineering
    • PID: 11099257
    • D'haeseleer P, Liang S, Somogyi R: Genetic network inference: from co-expression clustering to reverse engineering. Bioinformatics. 2000, 16: 707-726. 10.1093/bioinformatics/16.8.707. DOI: 10.1093/bioinformatics/16.8.707
    • (2000) Bioinformatics , vol.16 , pp. 707-726
    • D'haeseleer, P.1    Liang, S.2    Somogyi, R.3
  • 7
    • 0033028596 scopus 로고    scopus 로고
    • Systematic determination of genetic network architecture
    • PID: 10391217, COI: 1:CAS:528:DyaK1MXkt1eqsbY%3D
    • Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM: Systematic determination of genetic network architecture. Nat Genet. 1999, 22: 281-285. 10.1038/10343. DOI: 10.1038/10343
    • (1999) Nat Genet , vol.22 , pp. 281-285
    • Tavazoie, S.1    Hughes, J.D.2    Campbell, M.J.3    Cho, R.J.4    Church, G.M.5
  • 8
    • 0035135420 scopus 로고    scopus 로고
    • Regulatory element detection using correlation with expression
    • PID: 11175784, COI: 1:CAS:528:DC%2BD3MXhtFGktLk%3D
    • Bussemaker HJ, Li H, Siggia ED: Regulatory element detection using correlation with expression. Nat Genet. 2001, 27: 167-171. 10.1038/84792. DOI: 10.1038/84792
    • (2001) Nat Genet , vol.27 , pp. 167-171
    • Bussemaker, H.J.1    Li, H.2    Siggia, E.D.3
  • 11
    • 0032729435 scopus 로고    scopus 로고
    • Exploring expression data: identification and analysis of coexpressed genes
    • PID: 10568750, COI: 1:CAS:528:DyaK1MXns12ktrc%3D
    • Heyer LJ, Kruglyak S, Yooseph S: Exploring expression data: identification and analysis of coexpressed genes. Genome Res. 1999, 9: 1106-1115. 10.1101/gr.9.11.1106. DOI: 10.1101/gr.9.11.1106
    • (1999) Genome Res , vol.9 , pp. 1106-1115
    • Heyer, L.J.1    Kruglyak, S.2    Yooseph, S.3
  • 12
    • 34250922831 scopus 로고
    • The varimax criterion for analytic rotation in factor analysis
    • Kaiser HF: The varimax criterion for analytic rotation in factor analysis. Psychometrika. 1958, 23: 187-200. DOI: 10.1007/BF02289233
    • (1958) Psychometrika , vol.23 , pp. 187-200
    • Kaiser, H.F.1
  • 13
    • 85182602677 scopus 로고    scopus 로고
    • SPSS. [http://www.spss.com]
  • 14
    • 85182604616 scopus 로고    scopus 로고
    • CLUSFAVOR. [http://mbcr.bcm.tmc.edu/genepi/]
  • 15
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • PID: 9843981, COI: 1:CAS:528:DyaK1cXotVGmurk%3D
    • Eisen MB, Spellman PT, Brown PO, Botstein D: Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA. 1998, 95: 14863-14868. 10.1073/pnas.95.25.14863. DOI: 10.1073/pnas.95.25.14863
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 14863-14868
    • Eisen, M.B.1    Spellman, P.T.2    Brown, P.O.3    Botstein, D.4
  • 16
    • 85182608602 scopus 로고    scopus 로고
    • SAS. [http://www.sas.com]
  • 17
    • 85182609290 scopus 로고    scopus 로고
    • Statistica.[http://www.statsoft.com]
    • Statistica
  • 18
    • 85182591920 scopus 로고    scopus 로고
    • Insightful. [http://www.insightful.com]
    • Insightful.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.