Effect of amino acid on forming residue-residue contacts in proteins

Polymer

Volumn 43, Issue 22, 2002, Pages 6037-6047

  Jiang, Zhouting ^a   Zhang, Linxi ^a   Chen, Jin ^a   Xia, Agen ^a   Zhao, Delu ^b  

^a ZHEJIANG UNIVERSITY   (China)

^b INSTITUTE OF CHEMISTRY   (China)

Author keywords

Amino acid; Protein folding; Short range and long range contacts

Indexed keywords

AMINO ACIDS; CONFORMATIONS; PROTEINS; STABILITY;

PROTEIN FOLDING;

POLYMERS;

AMINO ACID; ARGININE; CYSTEINE; GLOBULAR PROTEIN; GLUTAMIC ACID; GLUTAMINE; HISTIDINE; ISOLEUCINE; LEUCINE; METHIONINE; PHENYLALANINE; PROTEIN DERIVATIVE; SERINE; TRYPTOPHAN; TYROSINE; VALINE;

ARTICLE; CALCULATION; CONFORMATIONAL TRANSITION; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN INTERACTION; PROTEIN STABILITY;

AMINO ACID ANALYSIS;

EID: 0037072946     PISSN: 00323861     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0032-3861(02)00501-3     Document Type: Article

References (24)

1. Branden C, Tooze J. Introduction to protein structure. New York: Garland; 1991.
2. Creighton TE. Proteins: structures and molecular properties. New York: Freeman; 1983.
3. Fletterick RJ, Schroer T, Matela RJ. Molecular structure: macromolecular in three dimensions. Oxford: Blackwell Scientific; 1985.
4. Kamtekar S, Schiffer JM, Xiongm H, Babik JM, Hecht MH. Science 1993;262:1680-5.
5. Lau KF, Dill KA. Macromolecules 1989;22:3986-97.
6. Dill KA, Bromberg S, Yue K, Fiebig KM, Yee KM, Thomas PD, Chan HS. Protein Sci 1995;4:561-602.
7. Yue K, Fiebig KM, Thomas PD, Chan HS, Shackhnovich El, Dill KA. Proc Natl Acad Sci USA 1995;92:325-9.
8. Regan L, DeGrado WF. Science 1988;241:976-9.
9. Miyazawa S, Jernigan RL. J Mol Biol 1996;256:623-44.
10. Miyazawa S, Jernigan RL. Macromolecules 1985;18:543-52.
11. Linxi Z, Delu Z. Submitted for publication.
12. Crippen GM. Biopolymers 1977;16:2189-96.
13. Miyazawa S, Jernigan RL. Biopolymers 1982;21:1333-63.
14. Jernigan RL, Miyazawa S. Biopolymers 1983;22:79-85.
15. Manavalan P, Ponnuswamy PK. Arch Biochem Biophys 1977;184:476-87.
16. Manavalan P, Ponnuswamy PK. Nature 1978;275:673-4.
17. Ponnuswamy PK. Prog Biophys Mol Biol 1993;59:57-103.
18. Gromiha MM, Selvaraj S. Recent Res Dev Biophys Chem 2000;1:1-14.
19. Debe DA, Goddard WA. J Mol Biol 1999;294:619-27.
20. Gromiha MM, Oobatake M, Kono H, Uedaira H, Sarai A. Protein Eng 1999;12:549-55.
21. Gromiha MM. Biophys Chem 2001;91:71-7.
22. Gromiha MM, Selvaraj S. Biophys Chem 1999;77:49-68.
23. Gromiha MM, Selvaraj S. Int J Biol Macromol 2001;29:25-34.
24. Flory PJ. Statistical mechanics of chain molecules. New York: Wiley; 1969.