The structure and evolution of the major capsid protein of a large, lipid-containing DNA virus

Proceedings of the National Academy of Sciences of the United States of America

Volumn 99, Issue 23, 2002, Pages 14758-14763

  Nandhagopal, Narayanasamy ^a   Simpson, Alan A ^a   Gurnon, James R ^b   Yan, Xiadong ^a   Baker, Timothy S ^a   Graves, Michael V ^b,c   Van Etten, James L ^b   Rossmann, Michael G ^a  

^a PURDUE UNIVERSITY   (United States)

^b UNIVERSITY OF NEBRASKA LINCOLN   (United States)

^c University of Massachusetts Lowell   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; UNCLASSIFIED DRUG; VIRUS GLYCOPROTEIN; VIRUS PROTEIN; VP54 PROTEIN;

ARTICLE; CHLORELLA VIRUS; CRYOELECTRON MICROSCOPY; DNA VIRUS; EVOLUTION; IMAGE RECONSTRUCTION; NONHUMAN; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN PURIFICATION; PROTEIN STRUCTURE; STRUCTURE ANALYSIS; VIRUS CAPSID;

CAPSID; CRYOELECTRON MICROSCOPY; DNA VIRUSES; EVOLUTION, MOLECULAR; GLYCOSYLATION; MODELS, MOLECULAR; PROTEIN CONFORMATION; PROTEIN SUBUNITS;

CHLORELLA VIRUS; DNA VIRUSES; EUKARYOTA; HUMAN ADENOVIRUS; MAMMALIA; PARAMECIUM; PARAMECIUM BURSARIA; PARAMECIUM BURSARIA CHLORELLA VIRUS 1; PROTISTA;

EID: 0037069358     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.232580699     Document Type: Article

References (41)

1. Yan, X., Olson, N. H., Van Etten, J. L., Bergoin, M., Rossmann, M. G. & Baker, T. S. (2000) Nat. Struct. Biol. 7, 101-103.
2. Van Etten, J. L., Lane, L. C. & Meints, R. H. (1991) Microbiol. Rev. 55, 586-620.
3. Tidona, C. A., Schnitzler, P., Kehm, R. & Darai, G. (1998) Virus Genes 16, 59-66.
4. Dixon, L. K., Rock, D. & Vinuela, E. (1995) in Virus Taxonomy, eds. Murphy, F. A., Fauquet, C. M., Bishop, D. H. L., Ghabrial, S. A., Jarvis, A. W., Martelli, G. P., Mayo, M. A. & Summers, M. D. (Springer, New York), pp. 92-94.
5. Meints, R. H., Lee, K., Burbank, D. E. & Van Etten, J. L. (1984) Virology 138, 341-346.
6. Meints, R. H., Lee, K. & Van Etten, J. L. (1986) Virology 154, 240-246.
7. Bamford, D. H., Caldentey, J. & Bamford, J. K. H. (1995) Adv. Virus Res. 45, 281-319.
8. Rohozinski, J., Girton, L. E. & Van Etten, J. L. (1989) Virology 168, 363-369.
9. Van Etten, J. L. & Meints, R. H. (1999) Annu. Rev. Microbiol. 53, 447-494.
10. Skrdla, M. P., Burbank, D. E., Xia, Y., Meints, R. H. & Van Etten, J. L. (1984) Virology 135, 308-315.
11. Wrigley, N. G. (1969) J. Gen. Virol. 5, 123-134.
12. Wrigley, N. G. (1970) J. Gen. Virol. 6, 169-173.
13. Caspar, D. L. D. & Klug, A. (1962) Cold Spring Harbor Symp. Quant. Biol. 27, 1-24.
14. Benson, S. D., Bamford, J. K. H., Bamford, D. H. & Burnett, R. M. (1999) Cell 98, 825-833.
15. Stewart, P. L., Fuller, S. D. & Burnett, R. M. (1993) EMBO J. 12, 2589-2599.
16. Butcher, S. J., Bamford, D. H. & Fuller, S. D. (1995) EMBO J. 14, 6078-6086.
17. San Martin, C., Burnett, R. M., de Haas, F., Heinkel, R., Rutten, T., Fuller, S. D., Butcher, S. J. & Bamford, D. H. (2001) Structure (London) 9, 917-930.
18. Rossmann M. G., Arnold, E., Erickson, J. W., Frankenberger, E. A., Griffith, J. P., Hecht, H. J., Johnson, J. E., Kamer, G., Luo, M., Mosser, A. G., et al. (1985) Nature 317, 145-153.
19. Van Etten, J. L., Burbank, D. E., Xia, Y. & Meints, R. H. (1983) Virology 126, 117-125.
20. Otwinowski, Z. & Minor, W. (1997) Methods Enzymol. 276, 307-326.
21. Terwilliger, T. C. & Berendzen, J. (1999)Acta Crystallogr D 55, 849-861.
22. Jones, T. A., Zou, J. Y., Cowan, S. W. & Kjeldgaard, M. (1991)Acta Crystallogr. A 47, 110-119.
23. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., et al. (1998) Acta Crystallogr. D 54, 905-921.
24. Navaza, J. (1994) Acta Crystallogr. A 50, 157-163.
25. Collaborative Computational Project Number 4 (1994) Acta Grystallogr. D 50, 760-763.
26. Benson, S. D., Bamford, J. K. H., Bamford, D. H. & Burnett, R. M. (2002) Acta Crystallogr. D 58, 39-59.
27. Rossmann, M. G. & Johnson, J. E. (1989) Annu. Rev. Biochem. 58, 533-573.
28. Harrison, S. C., Olson, A. J., Schutt, C. E., Winkler F. K. & Bricogne, G. (1978) Nature 276, 368-373.
29. Abad-Zapatero, C., Abdel-Meguid, S. S., Johnson, J. E., Leslie, A. G. W., Rayment, I., Rossmann, M. G., Suck, D. & Tsukihara, T. (1980) Nature 286, 33-39.
30. Branden, C. & Tooze, J. (1991) Introduction to Protein Structure (Garland, New York).
31. Roberts, M. M., White, J. L. Grütter, M. G. & Burnett, R. M. (1986) Science 232, 1148-1151.
32. Arnold, E., Luo, M, Vriend, G., Rossmann, M. G., Palmenberg, A. C., Parks, G. D., Nicklin, M. J. H. & Wimmer, E.(1987) Proc. Natl. Acad. Sci. USA 84, 21-25.
33. Lin, T., Chen, Z., Usha, R., Stauffacher, C. V., Dai, J.-B., Schmidt, T. & Johnson, J. E. (1999) Virology 265, 20-34.
34. Wriggers, W., Milligan, R. A. & McCammon, J. A. (1999) J. Struct. Biol. 125, 185-189.
35. Rossmann, M. G., Bernal, R. & Pletnev, S. V. (2001) J. Struct. Biol. 136, 190-200.
36. Graves, M. V., Bernadt, C. T., Cerny, R. & Van Etten, J. L. (2001) Virology 285, 332-345.
37. Que, Q., Li, Y., Wang, I.-N., Lane, L. C., Chaney, W. G. & Van Etten, J. L. (1994) Virology 203, 320-327.
38. Knipe, D. M. (1996) in Fields Virology, eds. Fields, B. N., Knipe, D. M. & Howley, P. M. (Lippincott, Philadelphia), pp. 273-299.
39. Kraulis, P. (1991) J. Appl. Crystallogr, 24, 946-950.
40. Merritt, E. A. & Bacon, D. J. (1997) Methods Enzymol. 277, 505-524.
41. Nicholls, A., Bharadwaj, R., & Honig, B., (1993) Biophys. J. 64, 166-170.