Effect of the solvent refractive index on the excited-state lifetime of a single tryptophan residue in a protein

Journal of Physical Chemistry B

Volumn 106, Issue 14, 2002, Pages 3724-3734

  Toptygin, Dmitri ^a   Savtchenko, Regina S ^a   Meadow, Norman D ^a   Roseman, Saul ^a   Brand, Ludwig ^a  

^a JOHNS HOPKINS UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FLUOROPHORES;

EMISSION SPECTROSCOPY; ENZYMES; GLYCEROL; REFRACTIVE INDEX; SOLVENTS;

PROTEINS;

EID: 0037061949     PISSN: 10895647     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp0133889     Document Type: Article

References (57)

1. Weber, G.; Teale, F.J.W. Discuss. Faraday Soc. 1959, 27, 134.
2. Lakowicz, J.R.; Weber, G. Biochemistry 1973, 12, 4171.
3. Eftink, M.R. In Topics in Fluorescence Spectroscopy; Lakowicz, J.R., Ed.; Plenum: New York, 1991; Volume 2, Chapter 2.
4. Chen, Y.; Barkley, M.D. Biochemistry 1998, 37, 9976.
5. Nanda, V.; Brand, L. Proteins 2000, 40, 112.
6. Toptygin, D.; Savtchenko, R.S.; Meadow, N.D.; Brand, L. J. Phys. Chem. B 2001, 105, 2043.
7. 6 but this result was not included in the paper.
8. Drexhage, K.H.J. Luminescence 1970, 1, 2, 693.
9. Drexhage, K.H. In Progress in Optics; Wolf, E., Ed.; North-Holland: Amsterdam, 1974; Volume XII, Chapter IV.
10. Wittke, J.P. RCA Rev. 1975, 36, 655.
11. Lukosz, W.; Kunz, R.E. Opt. Commun. 1979, 31, 42.
12. Kunz, R.E.; Lukosz, W. Phys. Rev. B 1980, 21, 4814.
13. Lukosz, W. Phys. Rev. B 1980, 22, 3030.
14. Yahlonovitch, E.; Gmitter, T.J.; Bhat, R. Phys. Rev. Lett. 1988, 61, 2546.
15. Glauber, R.J.; Lewenstein, M. Phys. Rev. A 1991, 43, 467.
16. Toptygin, D.; Svobodova, J.; Konopasek, I.; Brand, L. J. Chem. Phys. 1992, 96, 7919.
17. Ho, S.T.; McCall, S.L.; Slusher, R.E. Opt. Lett. 1993, 18, 909.
18. Toptygin, D.; Brand, L. Biophys. Chem. 1993, 48, 205.
19. Toptygin, D.; Brand, L. J. Fluoresc. 1995, 5, 39.
20. Klimov, V.V.; Ducloy, M.; Letokhov, V.S.J. Modern Opt. 1996, 43, 549.
21. Lavallard, P.; Rosenbauer, M.; Gacoin, T. Phys. Rev. A 1996, 54, 5450.
22. Krishna, M.M.G.; Periasamy, N. J. Fluoresc. 1998, 8, 81.
23. Schuurmans, F.J.P.; de Lang, D.T.N.; Wegdam, G.H.; Spirk, R.; Lagendijk, A. Phys. Rev. Lett. 1998, 80, 5077.
24. Krishna, M.M.G.; Periasamy, N. Chem. Phys. Lett. 1998, 298, 359.
25. Petrov, E.P.; Kruchenok, J.V.; Rubinov, A.N.J. Fluoresc. 1999, 9, 111.
26. Lamouche, G.; Lavallard, P.; Gacoin, T. Phys. Rev. A 1999, 59, 4668.
27. Schuurmans, F.J.P.; de Vries, P.; Lagendijk, A. Phys. Lett. A 2000, 264, 472.
28. Schuurmans, F.J.P.; Lagendijk, A. J. Chem. Phys. 2000, 113, 3310.
29. max must not exceed 180 nm. The equations derived herein may be inapplicable to proteins whose linear dimensions exceed 180 nm.
30. Pelton, J.G.; Torchia, D.A.; Remington, S.J.; Murphy, K.P.; Meadow, N.D.; Roseman, S. J. Biol. Chem. 1996, 271, 33446.
31. Strickler, S.J.; Berg, R.A. J. Chem. Phys. 1962, 37, 814.
32. Landau, L.D.; Lifshitz, E.M. Quantum Mechanics, 3rd ed.; Pergamon: New York, 1977; Chapter VI, section 42.
33. mn (m ≠ n) are responsible for the absorption and emission of photons.
34. Berestetskii, V.B.; Lifshitz, E.M.; Pitaevskii, L.P Quantum Electrodynamics, 2nd ed.; Pergamon: New York, 1982; Chapter I, sections 2 and 3.
35. Landau, L.D.; Lifshitz, E.M.; Pitaevskii, L.P. Electrodynamics of Continuous Media, 2nd ed.; Pergamon: New York, 1984; Chapter I, section 4, and Chapter II, section 8.
36. Jones, T.B. Electromechanics of Particles; Cambridge: New York, 1995; p 113.
37. Toptygin, D.; Brand, L. Chem. Phys. Lett. 2000, 322, 496.
38. Babul, J.; Stellwagen, E. Anal. Biochem. 1969, 28, 216.
39. McMeekin, T.L.; Wilensky, M.; Groves, M.L. Biochem. Biophys. Res. Commun. 1962, 7, 151.
40. Lakowicz, J.R. Principles of Fluorescence Spectroscopy, 2nd ed.; Plenum: New York, 1999; pp 52-53.
41. Chen, R.F. J. Res. Natl. Bur. Stand. A 1972, 76A, 593.
42. Teale, F.W.J.; Weber, G. Biochem. J. 1957, 65, 476.
43. Berlman, I.B. Handbook of Fluorescence Spectra; Academic Press: London, 1965; p 138.
44. Washburn, E.W.; West, C.J.; Dorsey, N.E.; Bichowsky, F.R.; Klemenc, A.; Eds. International Critical Tables of Numerical Data, Physics, Chemistry and Technology, 1st ed.; McGraw-Hill: New York, 1927-1930; Volume 2, p 337, and Volume 7, pp 12, 13, 40.
45. Weast, R.C., Astle, M.J., Beyer, W.H., Eds. CRC Handbook of Chemistry and Physics, 68th ed.; CRC Press: Boca Raton, FL, 19871988; pp C-502, D-232, D-262.
46. Worthylake, D.; Meadow, N.D.; Roseman, S.; Liao, D.-I.; Herzberg, O.; Remington, S. J. Proc. Natl. Acad. Sci. U.S.A. 1991, 88, 10382.
47. Hurley, J.H.; Faber, H.R.; Worthylake, D.; Meadow, N.D.; Roseman, S.; Pettigrew, D.W.; Remington, S. J. Science 1993, 259, 673.
48. Meadow, N.D.; Roseman, S. J. Biol. Chem. 1996, 271, 33440.
49. Savtchenko, R.S.; Meadow, N.D. Unpublished result.
50. The molar refraction of the protein was calculated by our program PROTREFR as a sum of the molar refractions of the individual residues taken from ref 39.
51. 52.
52. Cohn, E.J.; Edsall, J.T. Proteins, amino acids and peptides as ions and dipolar ions; Cobh, E.J., Edsall, J.T., Eds.; Reinhold: New York, 1965; pp 370-381,428-431.
53. Callis, P.R. Methods Enzymol. 1997, 278, 113.
54. Hahn, D.K.; Callis, P.R. J. Phys. Chem. A 1997, 101, 2686.
55. Callis, P.R. Personal communication.
56. Vivian, J.T.; Callis, P.R. Biophys. J. 2001, 80, 2093.
57. Callis, P.R.; Burgess, B.K. J. Phys. Chem. B 1997, 101, 9429.