Techniques for the identification of bivalve larvae

Marine Ecology Progress Series

Volumn 225, Issue , 2002, Pages 299-310

  Garland, Elizabeth D ^a   Zimmer, Cheryl Ann ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Bivalve larvae; Immunofluorescent probes; Molecular markers; Oligonucleotide probes; Species identification

Indexed keywords

IDENTIFICATION METHOD; LARVA; MOLECULAR ANALYSIS; MOLLUSC; PROBE;

BIVALVIA; INVERTEBRATA; MOLLUSCA;

EID: 0037059641     PISSN: 01718630     EISSN: None     Source Type: Journal    
DOI: 10.3354/meps225299     Document Type: Review

References (148)

1. A molecular phylogeny of the bivalve mollusks
2. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
3. Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
4. Phylogenetic identification and in situ detection of individual microbial cells without cultivation
5. High-resolution protein separation and identification methods applicable to virology
6. Species identification of bivalve larvae using random amplified polymorphic DNA (RAPD): Differentiation between Cerastoderma edule and C. lamarcki
7. A diagnostic molecular marker for zebra mussels (Dreissena polymorpha) and potentially co-occurring bivalves: Mitochondrial COI
8. Discrimination between closely related Pacific oyster species (Crassostrea) via mitochondrial DNA sequences coding for large subunit rRNA
9. Using an optical plankton counter to determine the size distributions of preserved zooplankton samples
10. Electrophoretic and morphometric criteria for the identification of the mussels Mytilus edulis and M. galloprovincialis
11. Preparation of DNA from numerous individual microscopic organisms for PCR-based assays of environmental samples
12. A DNA probe for identification of larvae of the commercial surfclam (Spisula solidissima)
13. Phylogenetic relationships among giant clam species (Mollusca: Tridacnidae) determined by protein electrophoresis
14. Application of image analysis in demographic studies of marine zooplankton in large marine ecosystems
15. In situ microscopy for on-line determination of biomass
16. Automatic determination of bacterio-plankton biomass by image analysis
17. Chromosome karyotyping of fish using conventional and G-banding methods
18. The immunofluorescence approach in microbial ecology
19. Morphological plasticity in laboratory-reared echinoplutei of Dendraster excentricus (Eschscholtz) and Lytechinus variegatus (Lamarck) in response to food conditions
20. Affinity purification of antigen-specific serum immunoglobulin from the European eel (Anguilla anguilla)
21. DNA sequence variation of the mitochondrial 16S rRNA in Calanus (Copepoda; Calanoida): Intraspecific and interspecific patterns
22. Molecular tools in marine ecology
23. Larval settlement of soft-sediment invertebrates: The spatial scales of pattern explained by active habitat selection and the emerging rôle of hydrodynamical processes
24. CoOP: Coastal ocean processes study: Interdisciplinary approach, new technology to determine coupled biological, physical, geological processes affecting larval transport on inner shelf
25. Spatial and temporal variation in settlement and recruitment of intertidal barnacles
26. Antigenic analysis of Chlamydiae by 2-dimensional immunoelectrophoresis. II. A Trachoma-LGV-specific antigen
27. Identification and enumeration of marine chroococcoid cyanobacteria by immunofluorescence
28. Immunochemical characterization of eukaryotic ultraplankton from the Atlantic and Pacific oceans
29. Transoceanic and interoceanic dispersal of coastal marine organisms: The biology of ballast water
30. Ecological roulette: The global transport of nonindigenous marine organisms
31. Identification and localization of bacterial endosymbionts in hydrothermal vent taxa with symbiont-specific polymerase chain reaction amplification and in situ hybridization techniques
32. Aids for identification of bivalve larvae of Virginia
33. Identification of marine invertebrate larvae by means of PCR-RAPD species-specific markers
34. Enumeration and separation of the toxic dinoflagellate Alexandrium minutum from natural samples using immunological procedures with blocking antibodies
35. Preparatory electroimmunodiffusion for making precipitins to selected native antigens
36. Automatic classification of field-collected dinoflagellates by artificial neural network
37. Diversity dynamics of marine bacteria studied by immunofluorescent staining on membrane filters
38. Micropatchiness, turbulence and recruitment in plankton
39. The video plankton recorder (VPR): Design and initial results
40. Microaggregations of oceanic plankton observed by towed video microscopy
41. Field preservation of marine invertebrate tissue for DNA analyses
42. Phylogenetic diversity of aggregate-attached vs. free-living marine bacterial assemblages
43. Phylogenetic stains: Ribosomal RNA-based probes for the identification of single cells
44. Immunofluorescence identification of early life history stages of scallops (Pectinidae)
45. A method for the production of highly specific polyclonal antibodies
46. Recent advances and future directions in multi-disciplinary in situ oceanographic measurement systems
47. Counting, sizing, and identification of algae using image analysis
48. Electronic measuring devices in the sorting of marine zooplankton
49. Immunological detection of Mercenaria mercenaria in a predator and preparation of size-class specific antibodies
50. Antigenic similarities among estuarine soft-bottom benthic taxa
51. Immunological methods for food web analysis in a soft-bottom benthic community
52. DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates
53. DNA sequencing of formalinfixed crustaceans from archival research collections
54. Procedures for accurate documentation of shapes and dimensions of larval bivalve shells with scanning electron microscopy
55. Hybridization among Crassostrea species: A review
56. Spatial variation in larval concentrations as a cause of spatial variation in settlement for the barnacle, Balanus glandula
57. High-resolution observations of plankton spatial distributions correlated with hydrography in the Great South Channel, Georges Bank
58. The production of monospecific antisera to soft-bottom benthic taxa
59. Hourly variations in planktonic larval concentrations on the inner shelf: Emerging patterns and processes
60. Larval distributions in inner-shelf waters: The roles of wind-driven cross-shelf currents and diel vertical migrations
61. Molecular approaches to the study of marine biological invasions
62. Interspecific and intrapopulation variation in mitochondrial ribosomal DNA sequences of Mytilus spp. (Bivalvia: Mollusca)
63. Fourier analysis of bivalve outlines: Implications on evolution and autecology
64. The polymerase chain reaction
65. Bioacoustical oceanography: New tools for zooplankton and micronekton research in the 1990s
66. Intertidal zonation of barnacles: The influence of planktonic zonation of larvae on vertical distribution of adults
67. Characterization of genetic structure and genealogies using RAPD-PCR markers: A random primer for the novice and nervous
68. The production of monoclonal antibodies for use as probes in the identification of Northern Australian crown-of-thorns starfish and commercial prawn larvae
69. Polychaete larval settlement: Correspondence of patterns in suspended jar collectors and in the adjacent natural habitat in Monterey Bay, California
70. Single-step species identification of bivalve larvae using multiplex polymerase chain reaction
71. Patterns and processes in the time-space scales of plankton distributions
72. Ecological interaction between sympatric Mytilus species on the west coast of Canada investigated using PCR markers
73. Design and calibration of a new optical plankton counter capable of sizing small zooplankton
74. Use of acoustic frequency diversity for marine biological measurements
75. Electrophoretic identification and genetic analysis of bivalve larvae
76. Individual-specific 'fingerprints' of human DNA
77. Automated sizing, counting and identification of zooplankton by pattern recognition
78. Lamellibranchia
79. Analysis of small-subunit rRNA gene sequences from six families of molluscs
80. Notes on the breeding of some lamellibranchs from Plymouth and their larvae
81. The larval and post-larval hinge of some families of bivalve molluscs
82. A review of methods for labeling and tracking marine invertebrate larvae
83. Cytogenetics of the amphipod Jassa marmorata (Corophioidea: Ischyroceridae): Karyotype morphology, chromosome banding, fluorescent in situ hybridization, and nuclear DNA content
84. Dimensions and shapes of larvae of some marine bivalve mollusks
85. Hinge morphogenesis in the shells of larval and early post-larval mussels (Mytilus edulis L. and Modiolus modiolus [L.])
86. Classification of bivalve larvae and early post-larvae using scanning electron microscopy
87. Micro- and ultramorphology of larval bivalve shells: Ecological, paleoecological, and paleoclimatic applications
88. Preliminary observations on the usefulness of hinge structures for identification of bivalve larvae
89. Antigenic finger-printing of methanogenic bacteria with polyclonal antibody probes
90. Field studies of bivalve larvae and their recruitment to the benthos: A commentary
91. Population genetic structure of the armorhead, Pseudopentaceros wheeleri, in the North Pacific Ocean: Application of the polymerase chain reaction to fisheries problems
92. Phytoplankton recognition using parametric discriminants
93. Allozymes and morphometric characters of three species of Mytilus in the Northern and Southern hemispheres
94. Distribution of holothurian larvae determined with species-specific genetic probes
95. The use of polyclonal antisera and blocking of antibodies in the identification of marine dinoflagellates: Species-specific and clone-specific antisera against Gymnodinium and Alexandrium
96. Monoclonal antibodies as species-specific probes in oceanographic research: Examples with intertidal barnacle larvae
97. On the identification of lamellibranch larvae
98. Nature's subsidies to shrimp and salmon farming
99. Differences in mitochondrial 16S ribosomal gene sequences allow discrimination among American [Crassostrea virginica (Gmelin)] and Asian [C. gigas (Thunberg) C. ariakensis (Wakiya)] oyster species
100. Mitochondrial cytochrome oxidase I gene sequences support an Asian origin for the Portuguese oyster Crassostrea angulata
101. Immunochemical detection of predation on ciliate protists by larvae of the northern anchovy (Engraulis mordax)
102. Whose larvae?
103. In-situ silhouette photography of Gulf Stream zooplankton
104. Large mitochondrial DNA differences between morphologically similar penaeid shrimp
105. Immunological recognition of marine bivalve larvae from plankton samples
106. Optical-digital system applied to the identification of five phytoplankton species
107. Acoustic measurements of zooplankton distributions in the sea
108. A molecular approach to recruitment problems: Genetics and physiology
109. Application of molecular techniques to the study of marine recruitment problems
110. Multicolor immunofluorescence analysis
111. The identification and classification of lamellibranch larvae
112. Nucleotide sequence of the 18S ribosomal RNA gene from the Atlantic sea scallop Placopecten magellanicus (Gmelin, 1791)
113. A comparison of molluscan (Bivalvia) phylogenies based on palaeontological and molecular data
114. Investigation of practical means of distinguishing Mya arenaria and Hiatella sp. larvae in plankton samples
115. On dispersal and planktonic larvae of benthic invertebrates: An eclectic overview and summary of problems
116. Internal-wave-mediated shoreward transport of cyprids, megalopae, and gammarids and correlated longshore differences in the settling rate of intertidal barnacles
117. Immunochemical recognition of phytoplankton species
118. Latitudinal variation in the Dungeness crab, Cancer magister: Zoeal morphology explained by incubation temperature
119. Color image-analyzed fluorescence microscopy: A new tool for marine microbial ecology
120. Species identification of spiny lobster phyllosome larvae via ribosomal DNA analysis
121. On the recognition of bivalve larvae in plankton collections
122. Development and application of nucleic acid probes
123. A method for cytogenetic and cytological examination of small shelled larvae of bivalves and other zooplankton
124. Heterochronic developmental plasticity in larval sea urchins and its implications for evolution of nonfeeding larvae
125. Bivalve larvae of Malpeque Bay, P.E.I.
126. PCR-based nuclear and mtDNA markers and shell morphology as an approach to study the taxonomic status of the Chilean blue mussel, Mytilus chilensis (Bivalvia)
127. Studies of bivalve larvae using the scanning electron microscope and critical point drying
128. Immunology in biological oceanography and marine ecology
129. Marine ammonia- and nitrite-oxidizing bacteria: Serological diversity determined by immunofluorescence in culture and in the environment
130. Age-structure, recruitment, and adult mortality in populations of the Atlantic surfclam, Spisula solissima, from 1978 to 1997
131. Fingerprinting genomes using PCR with arbitrary primers
132. Über die entwicklung und artunterscheidung von muschellarven des nordseeplanktons, unter besonderer berücksichtigung der schalenentwicklung
133. Ligase chain reaction
134. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers
135. Flow cytometry: Near real-time information about ocean biology
136. Immunochemical approaches to coastal, estuarine and oceanographic questions
137. Studies on larvae and young shells of industrial bivalves in Japan
138. Early life history of useful bivalves in the Ariake Sea (II)
139. High-resolution analysis of karyotypes prepared from different tissues of the eastern oyster Crassostrea virginica