Allelic alterations at the STR markers in the buccal tissue cells of oral cancer patients and the oral epithelial cells of healthy betel quid-chewers: An evaluation of forensic applicability

Forensic Science International

Volumn 129, Issue 3, 2002, Pages 158-167

  Pai, Chung Yen ^a,c   Hsieh, Ling Ling ^b   Tsai, Chun Wei ^c   Chiou, Fu Shyan ^c   Yang, Chiou Herr ^c   Hsu, Ban Dar ^a  

^a NATIONAL TSING HUA UNIVERSITY   (Taiwan)

^b CHANG GUNG UNIVERSITY   (Taiwan)

^c CENTRAL POLICE UNIVERSITY   (Taiwan)

Author keywords

Allelic alteration; Allelic imbalance; BQ chewers; Buccal epithelial cells; Loss of heterozygosity (LOH); Short tandem repeat (STR)

Indexed keywords

DNA;

ALLELIC IMBALANCE; ANALYSIS OF VARIANCE; ARTICLE; BETEL NUT; BLOOD SAMPLING; CANCER PATIENT; CANCER STAGING; CONTROLLED STUDY; DISEASE SEVERITY; DNA FINGERPRINTING; FORENSIC MEDICINE; GENE LOCUS; GENETIC STABILITY; HETEROZYGOSITY; HUMAN; HUMAN CELL; MAJOR CLINICAL STUDY; MARKER GENE; MOUTH CARCINOMA; MOUTH MUCOSA; PATHOLOGY; PRIORITY JOURNAL; STATISTICAL SIGNIFICANCE; TANDEM REPEAT;

EID: 0037048614     PISSN: 03790738     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0379-0738(02)00205-0     Document Type: Article

References (26)

1. Jeffreys A.J., Jeffreys M.J., Hagelberg E., Sonnberg A. Identification of the skeletal remains of Josef Mengele by DNA analysis. Forensic Sci. Int. 56:1992;65-76.
2. Kimpton C.P., Fisher D., Watson S., Adams M., Urquhart A., Lygo J., Gill P. Evaluation of an automated DNA profiling system employing multiplex amplification of four tetrameric STR loci. Int. J. Legal Med. 106:1994;302-311.
3. Lygo J.E., Johnson P.E., Holdway D.J., Woodroffe S., Whitaker J.P., Clayton T.M., Kimpton C.P., Gill P. The validation of short tandem repeat (STR) loci for use in forensic casework. Int. J. Legal Med. 107:1994;77-89.
4. Gill P., Ivanov P.I., Kimpton C., Piercy R., Benson N., Tully G., Evett I., Hagelberg E., Sullivan K.M. Identification of the remains of the Romanov family by DNA analysis. Nat. Genet. 6:1994;130-135.
5. Hagelberg E., Gray I.C., Jeffreys A.J. Identification of the skeletal remains of a murder victim by DNA analysis. Nature. 352:1991;427-429.
6. Jeffreys A.J., Allen M.J., Hagelberg E., Sonnberg A. Identification of skeletal remains of Josef Mengele by DNA analysis. Forensic Sci. Int. 56:1992;65-76.
7. Weber J.L., Wong C. Mutation of human short tandem repeats. Hum. Mol. Genet. 2:1993;1123-1128.
8. Mitas M. Trinucleotide repeats associated with human disease. Nucl. Acids Res. 25:1997;2245-2253.
9. Alwazzan M., Newman E., Hamshere M.G., Brook J.D. Myotonic dystrophy is associated with a reduced level of RNA from the DMWD allele adjacent to the expanded repeat. Hum. Mol. Genet. 8:1999;1491-1497.
10. Halling K.C., Harper J., Moskaluk C.A., Thibodeau S.N., Petroni G.R., Yustein A.S., Tosi P., Minacci C., Roviello F., Piva P., Hamilton S.R., Jackson C.E., Powell S.M. Origin of microsatellite in gastric cancer. Am. J. Pathol. 155:1999;205-211.
11. Schmitt F.C., Soares R., Gobbi H., Milanezzi F., Santos F.S., Cirnes L., Costa C., Seruca R. Microsatellite instability in medullary breast carcinomas. Int. J. Cancer. 82:1999;644-647.
12. Yeun-Jun C., Ji-Min S., Joo-Young L., Yong-Tae J., Eun-Joo S., Sang-Wook C., Mun-Gan R. Microsatellite instability-associated mutations associate preferentially with the intestinal type of primary gastric carcinomas in a high-risk population. Cancer Res. 56:1996;4662-4665.
13. Burks R.T., Kessis T.D., Cho K.R., Hedrick L. Microsatellite instability in endometrial carcinoma. Oncogene. 9:1994;1163-1166.
14. Rizos E., Sourvinos G., Spandidos D.A. Loss of heterozygosity at 8p, 9p, and 17q in laryngeal cytological specimens. Oral Oncol. 34:1998;519-523.
15. Velickovic M., Delahunt B., Grebe S.K. Loss of heterozygosity at 13p14.2 in clear cell renal cell carcinoma is an early event and is highly localized to the FHIT gene locus. Cancer Res. 59:1999;1323-1326.
16. Schwerdtle R.F., Storkel S., Neuhaus C., Brauch H., Weidt E., Brenner W. Allelic losses at chromosomes 1p, 2p, 6p, 10p, 13q, 17p, and 21q significantly correlate with the chromophobe subtype of renal cell carcinomas. Cancer Res. 56:1996;2927-2930.
17. Hoff-Olsen P., Jacobsen S., Mevag B., Olaisen B. Microsatellite stability in human post-mortem tissues. Forensic Sci. Int. 119:2001;273-278.
18. Hsu C.M., Huang N.E., Tsai L.C., Chao C.H., Linacre A., Lee J.C. Identification of victims of the 1998 Taoyuan Airbus crash accident using DNA analysis. Int. J. Legal Med. 113:1999;43-46.
19. Whitaker J.P., Clayton T.M., Urquhart A.J., Kimpton E.S., Gill P. Short tandem repeat typing of bodies from a mass disaster: high success rate and characteristic amplification patterns in highly degraded samples. Biotechniques. 18:1995;670-677.
20. Rubocki R.J., Duffy K.J., Shepard K.L., McCue B.J., Shepherd S.J., Wisecarver J.L. Loss of heterozygosity detected in a short tandem repeat (STR) locus commonly used for human DNA identification. J. Forensic Sci. 45:2000;1087-1089.
21. Ko Y.C., Huang Y.L., Lee C.H., Chen M.J., Lin L.M., Tsai C.C. Betel quid chewing, cigarette smoking and alcohol consumption related to oral cancer in Taiwan. J. Oral Pathol. Med. 24:1995;250-453.
22. Jeng J.H., Hahn L.J., Lin B.R., Hsieh C.C., Chan C.P., Chang M.C. Effects of areca nut, inflorescence piper betle extracts and arecoline on cytotoxicity, total and unscheduled DNA synthesis in cultured gingival keratinocytes. J. Oral Pathol. Med. 28:1999;64-71.
23. Chiou F.-S., Pai C.-Y., Hsu Y.P.P., Tsai C.-W., Yang C.-H. Extraction of human DNA for PCR from chewed residues of betel quid using a novel "PVP/CTAB" method. J. Forensic Sci. 46:2001;166-177.
24. Mullenbach R., Lagoda P.J.L., Welter C. An efficient salt chloroform extraction of DNA from blood and tissues. Trends Genet. 5:1989;391.
25. Boyer J.C., Umar A., Risinger J.I., Lipford J.R., Kane M., Yin S., Barrett J.C., Kolodner R.D., Kunkel T.A. Microsatellite instability, mismatch repair deficiency, and genetic defects in human cancer cell lines. Cancer Res. 55:1995;6063-6070.
26. Brinkmann B., Klintschar M., Neuhuber F., Huhne J., Rolf B. Mutation rate in human microsatellites: influence of the structure and length of the tandem repeat. Am. J. Hum. Genet. 62:1998;1408-1415.