Differences between the sequential collapse folding pathways of apoleghemoglobin and apomyoglobin

Journal of Physical Chemistry B

Volumn 106, Issue 18, 2002, Pages 4818-4822

  Bergasa Caceres, Fernando ^a   Rabitz, Herschel A ^b  

^a PRINCETON UNIVERSITY   (United States)

^b Endesa SA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

SEQUENTIAL COLLAPSE FOLDING PATHWAYS;

ACTIVATION ENERGY; AMINO ACIDS; CHEMICAL BONDS; CONFORMATIONS; FREE ENERGY; HYDROPHOBICITY; MOLECULAR STRUCTURE; OPTIMIZATION; VAN DER WAALS FORCES;

PROTEINS;

EID: 0037046785     PISSN: 10895647     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp014075g     Document Type: Article

References (33)

1. Bergasa-Caceres, F.; Ronneberg, T.A.; Rabitz, H.A. J. Phys. Chem. B 1999, 103, 9749.
2. Bergasa-Caceres, F.; Rabitz, H.A. J. Phys. Chem. B 2001, 105, 2874.
3. Hollecker, M.; Creighton, T.E. J. Mol. Biol. 1983, 168, 409.
4. Krebs, H.; Schmid, F.X.; Jaenicke, R. J. Mol. Biol. 1983, 169, 619.
5. Stackhouse, T.M.; Onuffer, J.J.; Matthews, C.R.; Ahmed, S.A.; Miles, E.W. Biochemistry 1988, 27, 824.
6. Jaenicke, R. Prog. Biophys. Mol. Biol. 1987, 49, 117.
7. Plaxco, K.W.; Spitzfaden, C.; Campbell, I.D.; Dobson, C.M. J. Mol. Biol. 1997, 270, 763.
8. Chiti, F.; Taddei, N.; White, P.M.; Bucciantini, M.; Magherini, F.; Stefani, M.; Dobson, C.M. Nat. Struct. Biol. 1999, 6, 1005.
9. Martínez, J.C.; Serrano, L. Nat. Struct. Biol. 1999, 6, 1010.
10. Riddle, D.S.; Grantcharoav, V.P.; Santiago, J.V.; Alm, E.; Ruczinski, I.; Baker, D. Nat. Struct. Biol. 1999, 6, 1016.
11. Ternstrom, T.; Mayor, U.; Akke, M.; Oliveberg, M. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 14854.
12. Nishimura, C.; Prytulla, S.; Dyson, H.J.; Wright, P.E. Nat. Struct. Biol. 2000, 7, 679.
13. Landsmann, J.; Dennis, E.S.; Higgings, T.J.V.; Appleby, C.A.; Kortt, A.A.; Peacock, W.J. Nature 1986, 324, 166.
14. Jennings P.A.; Wright P.E. Science 1993, 262, 892.
15. Loh S.N.; Kay M.S.; Baldwin R.L. Proc. Natl. Acad. Sci. U.S.A. 1995, 92, 5446.
16. Ballew, R.M.; Sabelko, J.; Gruebele, M. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 5759.
17. Eliezer, D.; Yao, J.; Dyson, H.J.; Wright, P.E. Nat. Struct. Biol. 1998, 5, 148.
18. Dill, K.A. Biochemistry 1990, 29, 7133.
19. Schulz, G.E.; Schirmer, R.H. Principles of Protein Structure; Springer-Verlag: New York, 1979.
20. Kuwajima, K. Proteins: Struct. Funct. Genet. 1989, 6, 87.
21. Plaxco, K.W.; Millett, I.S.; Segel, D.J.; Doniach, S.; Baker D. Nature Struct. Biol. 1999, 6, 554.
22. Sali, A.; Shakhnovich, E.; Karplus, M. Nature 1994, 369, 248.
23. Bryngelson, J.D.; Onuchic J.N.; Socci, N.D.; Wolynes, P.G. Proteins: Struct. Funct. Genet. 1995, 21, 167.
24. Shoemaker, B.A.; Wolynes, P.G. J. Mol. Biol. 1999, 287, 657.
25. Shoemaker, B.A.; Wang, J.; Wolynes, P.G. J. Mol. Biol. 1999, 287, 675.
26. Levinthal, C.J. J. Chim. Phys. 1968, 65, 44.
27. Lazaridis, T.; Karplus, M. Science 1999, 278, 1928.
28. Ptitsyn, O.B.; Ting, K.L. J. Mol. Biol. 1999, 291, 671.
29. Ellis, P.J.; Appleby, C.A.; Guss, J.M.; Hunter, W.N.; Ollis, D.L.; Freeman, H.C. Acta Crystallogr. 1997, D53, 302.
30. Kuriyan, J.; Wilz, S.; Karplus, M.; Petsko, G.A. J. Mol. Biol. 1986, 192, 133.
31. Fauchère, J.L.; Pliska, V. Eur. J. Med. Chem. 1983, 18, 369.
32. Leszcynski, J.; Rose, G.D. Science 1986, 234, 849.
33. Damberger, F.; Nikonova, L.; Horst, G.; Peng, G.; Leal, W.S.; Wüthrich, K. Protein Science 2000, 9, 1038.