The dielectric spectrum of ubiquitin in aqueous solution

Journal of Physical Chemistry B

Volumn 105, Issue 17, 2001, Pages 3635-3638

  Knocks, A ^a   Weingartner H ^a  

^a RUHR UNIVERSITY BOCHUM   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BIOMOLECULES; DIELECTRIC SPECTRUM; DIPOLE MOMENT; PHYSICOCHEMICAL PROPERTIES; PROTEIN TUMBLING; UBIQUITIN;

COMPUTER SIMULATION; DIELECTRIC RELAXATION; HYDRATION; LAPLACE TRANSFORMS; PERMITTIVITY; SOLUTIONS;

PROTEINS;

EID: 0037013358     PISSN: 15206106     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp003700z     Document Type: Article

References (28)

1. (a) Takashima, S. Electrical Properties of Biopolymers and Membranes; Adam Hilger: Bristol, 1989.
2. (b) Pethig, R. Dielectric and Electronic Properties of Biological Materials', John Wiley & Sons: Chichester, 1979.
3. Grant, E. H.; Sfeppard, R. J.; South, P. G. Dielectric Behavior of Biological Molecules in Solution; Clarendon: Oxford, 1978.
4. Dachwitz, E.; Parak, F.; Stockhausen, M. Ber. Bunsen-Ces. Phys. Chem. 1989, 93 1454.
5. (a) Böttcher, C. J. F. Theory of Dielectric Polarization; Eisevier: Amsterdam, 1973; Vol. 1.
6. (b) Böttcher, C. J. F.; Bordewick, P. Theory of Dielectric Polarization; Eisevier: Amsterdam; 1978; Vol. 2.
7. Boresch, S.; Ringhofer, S.; Höchtl, P.; Steinhauser, O. Biophys. Chem. 1999, 78, 43.
8. Nadolny, H.; Volmari A.; Weingärtner, H. Ber, Bunsen-Ges. Phys. Chem. 1998, 102, 866.
9. Weingärtner, H.; Knocks, A.; Höchtl, P.; Steinhauser, O. J. Chem. Phys., to be submitted.
10. Ladanyi, B. M.; Skaf, M. S. J. Chem. Phys. 1996, 700, 1368.
11. Höchtl, P.; Boresch, S.; Steinhauser, O. J. Chem. Phys. 2000,112, 9810.
12. Löffler, G.; Schreiber, H.; Steinhauser, O. J. Mol. Biol. 1997,270, 520.
13. Boresch, S.; Höchtl P.; Steinhauser, O. J. Phys. Chem. B, in press.
14. Nandi, N.; Bagchi, B. J. Phys. Chem. A 1998, 702, 8217.
15. Nandi, N.; Battacharayya K.; Bagchi, B. Chem. Rev. 2000, 700, 2013. .
16. Vijay-Kumar, S.; Bugg, C. E.; Wilkinson, K. D.; Vierstra, R. D.; Hatfield, D. M.; Cook, D. J. J. Biol. Chem. 1987, 262, 6396.
17. Herschko, A Biochem. Sci. 1991, 16, 265.
18. (a) Kaatze, U. J. Solution Chem. 1997, 26, 1049.
19. (b) Göttmann, O.; Kaatze, U.; Petong, P. Meas. Sci. Technol. 1996, 7, 525.
20. Knocks, A.; Weingärtner, H.; Kaatze, U. Phys. Chem.-Chem. Phys., to be submitted.
21. Kaatze, U. J. Chem. Eng. Data 1989, 34, 371.
22. s,w = 86 (
23. van der Spool, D.; van Maaren, P. J.; Berendsen, H. J. C. J. Chem. Phys. 1998,70S, 10220); see also
24. Simonson, T. Chem. Phys. Lett. 1996, 250, 450. For internal consistency, we use the value reported by Hochtl et al. in our further considerations because their procedure for extracting the dielectric constant is the same as that used in the simulations of ubiquitin considered here.
25. 0/ρp, where pp is the particle density of the protein (Kaatze, U.; Bieler, H.; Pottel, R. J. Mol. Liquids 1985, 30, 101). There are other simplified expressions' which yield similar figures for the dipole moment.
26. Schneider D.M.; Dellwo, M. J.; Wand, A. J. Biochemistry 1992, 31, 3645.
27. Lienin, S. F.; Bremi, T.; Bratscher, B.; Brüschweiler, R.; Ernst, R. R. J. Am. Chem. Soc. 1998, 720, 9870.
28. Smith, P. E.; Brunne, R. M.; Mark, A. E.; van Gunsteren, W. F. J. Phys. Chem. 1993, 97, 2009.