A basidiomycetous anamorphic yeast, Trichosporon terricola sp. nov., isolated from soil

Journal of General and Applied Microbiology

Volumn 48, Issue 5, 2002, Pages 293-297

  Sugita, Takashi ^c   Takashima, Masako ^a   Nakase, Takashi ^b   Ichikawa, Tomoe ^c   Shinoda, Takako ^c   Nishikawa, Akemi ^c  

^a RIKEN BIORESOURCE CENTER   (Japan)

^b NATIONAL SCIENCE AND TECHNOLOGY DEVELOPMENT AGENCY   (Thailand)

^c MEIJI PHARMACEUTICAL UNIVERSITY   (Japan)

Author keywords

New species; Soil; Trichosporon terricola

Indexed keywords

DNA BASE; FUNGAL DNA; UBIQUINONE;

ANIMAL CELL; ARTICLE; BASIDIOMYCETES; BIOCHEMISTRY; CHEMOTAXONOMY; CONTROLLED STUDY; DNA BASE COMPOSITION; DNA DNA HYBRIDIZATION; FUNGAL MORPHOLOGY; FUNGUS ISOLATION; GENE SEQUENCE; GENUS; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; SOIL ANALYSIS; SPECIES IDENTIFICATION; TRICHOSPORON; TRICHOSPORON TERRICOLA;

PHYLOGENY; SOIL MICROBIOLOGY; TRICHOSPORON;

ANIMALIA; BASIDIOMYCOTA; FUNGI; TERRICOLA; TRICHOSPORON TERRICOLA;

EID: 0036996186     PISSN: 00221260     EISSN: None     Source Type: Journal    
DOI: 10.2323/jgam.48.293     Document Type: Article

References (19)

1. Ando, M., Suga, M., Nishiura, Y., and Miyajima, M. (1995) Summer-type hypersensitivity pneumonitis. Intern. Med., 34, 707-712.
2. Felsenstein, J. (1985) Confidence limits on phylogenies: An approach using the bootstrap. Evolution, 39, 783-791.
3. Guého, E., Improvisi, L., de Hoog, G. S., and Dupont, B. (1994) Trichosporon on humans: A practical account. Mycoses, 37, 3-10.
4. Guého, E., Smith, M. Th., and de Hoog, G. S. (1998) Trichosporon Behrend. In The Yeasts: A Taxonomic Study, 4th ed., ed. by Kurtzman, C. P. and Fell, J. W., Elsevier Science Publish, Amsterdam, pp. 854-872.
5. Kimura, M. (1980) A simple method for estimation evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol., 16, 111-120.
6. Kurtzman, C. P. and Robnett, C. J. (1997) Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5′ end of the large-subunit (26S) ribosomal DNA gene. J. Clin. Microbiol., 35, 1216-1223.
7. Middelhoven, W. J., Scorzetti, G., and Fell, J. W. (1999) Trichosporon guehoae sp. nov., an anamorphic basidiomycetous yeast. Can. J. Microbiol., 45, 686-690.
8. Middelhoven, W. J., Scorzetti, G., and Fell, J. W. (2000a) Trichosporon veenhuisii sp. nov., an alkane-assimilating anamorphic basidiomycetous yeast. Int. J. Syst. Evol. Microbiol., 50, 381-387.
9. Middelhoven, W. J., Scorzetti, G., and Fell, J. W. (2000b) Trichosporon porosum comb. nov., an anamorphic basidiomycetous yeast inhabiting soil, related to the loubieri/laibachii group of species that assimilate hemicelluloses and phenolic compounds. FEMS Yeast Res., 1, 1-8.
10. Nakase, T. and Suzuki, M. (1986) Bullera megalospora, a new species of yeast forming large ballistospores isolated from dead leaves of Oryza sativa, Miscanthus sinensis, and Sasa sp. in Japan. J. Gen. Appl. Microbiol., 32, 225-240.
11. Saitou, N. and Nei, M. (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4, 406-425.
12. Sugita, T. and Nakase, T. (1998) Molecular phylogenetic study of the basidiomycetous anamorphic yeast genus Trichosporon and related taxa based on small subunit ribosomal DNA sequences. Mycoscience, 39, 1-10.
13. Sugita, T., Nishikawa, A., Ikeda, R., and Shinoda, T. (1999) Identification of medically relevant Trichosporon species based on sequences of internal transcribed spacer regions and construction of a database for Trichosporon identification. J. Clin. Microbiol., 37, 1985-1993.
14. Sugita, T., Nakajima, M., Ikeda, R., Matsushima, T., and Shinoda, T. (2002) Sequence analysis of the ribosomal DNA intergenic spacer 1 regions of Trichosporon species. J. Clin. Microbiol., 40, 1826-1830.
15. Sugita, T., Takashima, M., Nakase, T., Ichikawa, T., Ikeda, R., and Shinoda, T. (2001) Two new yeasts, Trichosporon debeurmannianum sp. nov. and Trichosporon dermatis sp. nov., transferred from the Cryptococcus humicola complex. Int. J. Syst. Evol. Microbiol., 51, 1221-1228.
16. Tamaoka, J. and Komagata, K. (1984) Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol. Lett., 25, 125-128.
17. Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
18. Yang, Z., Suzuki, H., Sasaki, S., and Karube, I. (1996) Disposable sensor for biochemical oxygen demand. Appl. Microbiol. Biotechnol., 46, 10-14.
19. Yarrow, D. (1998) Methods for the isolation, maintenance, classification and identification of yeasts. In The Yeasts: A Taxonomic Study, 4th ed., ed. by Kurtzman, C. P. and Fell, J. W., Elsevier Science Publish, Amsterdam, pp. 75-100.