Nerve growth factor selectively regulates expression of transcripts encoding ribosomal proteins

BMC Neuroscience

Volumn 3, Issue , 2002, Pages

  Angelastro, James M ^a   Töröcsik, Béata ^a   Greene, Lloyd A ^a  

^a Columbia Univ College of Physicians ^*  (United States)

Author keywords

[No Author keywords available]

Indexed keywords

NERVE GROWTH FACTOR; RIBOSOME PROTEIN; MESSENGER RNA;

ANIMAL CELL; ARTICLE; BRAIN NERVE CELL; CELL CYCLE; CELL DIFFERENTIATION; CELL STRAIN; CELL SURVIVAL; CONTROLLED STUDY; GENE EXPRESSION REGULATION; GENE LIBRARY; GENETIC TRANSCRIPTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHEOCHROMOCYTOMA CELL; PROTEIN ANALYSIS; PROTEIN FUNCTION; PROTEIN LOCALIZATION; RAT; SERIAL ANALYSIS OF GENE EXPRESSION; STATISTICAL SIGNIFICANCE; TISSUE DISTRIBUTION; TRANSCRIPTION REGULATION; UNINDEXED SEQUENCE; ANIMAL; DRUG EFFECT; GENE EXPRESSION PROFILING; GENETICS; METABOLISM; METHODOLOGY; PHEOCHROMOCYTOMA;

ANIMALS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE LIBRARY; NERVE GROWTH FACTOR; PC12 CELLS; PHEOCHROMOCYTOMA; RATS; RIBOSOMAL PROTEINS; RNA, MESSENGER;

EID: 0036981759     PISSN: 14712202     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2202-3-3     Document Type: Article

References (48)

1. Levi-Montalcini R: The saga of the nerve growth factor. Neuroreport 1998, 9:R71-83
2. Frade JM, Barde YA: Nerve growth factor: two receptors, multiple functions. Bioessays 1998, 20:137-145
3. Tessarollo L: Pleiotropic functions of neurotrophins in development. Cytokine Growth Factor Rev 1998, 9:125-137
4. Greene LA, Shooter EM: The nerve growth factor: biochemistry, synthesis, and mechanism of action. Annu Rev Neurosci 1980, 3:353-402
5. Segal RA, Greenberg ME: Intracellular signaling pathways activated by neurotrophic factors. Annu Rev Neurosci 1996, 19:463-489
6. Greene LA, Tischler AS: Establishment of a noradrenergic clonal line of rat adrenal pheochromocytoma cells which respond to nerve growth factor. Proc Natl Acad Sci USA 1976, 73:2424-2428
7. Leonard DG, Ziff EB, Greene LA: Identification and characterization of mRNAs regulated by nerve growth factor in PC12 cells. Mol Cell Biol 1987, 7:3156-3167
8. Lee NH, Weinstock KG, Kirkness EF, Earle-Hughes JA, Fuldner RA, Marmaros S, Glodek A, Gocayne JD, Adams MD, Kerlavage AR, et al: Comparative expressed-sequence-tag analysis of differential gene expression profiles in PC-12 cells before and after nerve growth factor treatment. Proc Natl Acad Sci USA 1995, 92:8303-8307
9. Vician L, Basconcillo R, Herschman HR: Identification of genes preferentially induced by nerve growth factor versus epidermal growth factor in PC12 pheochromocytoma cells by means of representational difference analysis. J Neurosci Res. 1997, 50:32-43
10. Brown AJ, Hutchings C, Burke JF, Mayne LV: Application of a rapid method (targeted display) for the identification of differentially expressed mRNAs following NGF-induced neuronal differentiation in PC12 cells. Mol Cell Neurosci 1999, 13:119-130
11. Angelastro JM, Klimaschewski L, Tang S, Vitolo OV, Weissman TA, Donlin LT, Shelanski ML, Greene LA: Identification of diverse nerve growth factor-regulated genes by serial analysis of gene expression (SAGE) profiling. Proc Natl Acad Sci USA. 2000, 97:10424-10429
12. Greene LA, Farinelli SE, Cunningham ME, Park DS: Culture and experimental use of the PC12 rat pheochromocytoma cell line. In Culturing Nerve Cells 1998, 161-187
13. Velculescu VE, Zhang L, Vogelstein B, Kinzler KW: Serial analysis of gene expression. Science 1995, 270:484-487
14. Velculescu VE, Vogelstein B, Kinzler KW: Analysing uncharted transcriptomes with SAGE. Trends Genet 2000, 16:423-425
15. Yamamoto M, Wakatsuki T, Hada A, Ryo A: Use of serial analysis of gene expression (SAGE) technology. J Immunol Methods 2001, 250:45-66
16. Aletta JM, Angeletti R, Liem RK, Purcell C, Shelanski ML, Greene LA: Relationship between the nerve growth factor-regulated clone 73 gene product and the 58-kilodalton neuronal intermediate filament protein (peripherin). J Neurochem 1988, 51:1317-1320
17. Bai G, Weiss B: The increase of calmodulin in PC12 cells induced by NGF is caused by differential expression of multiple mRNAs for calmodulin. J Cell Physiol 1991, 149:414-421
18. Boon K, Caron HN, van Asperen R, Valentijn L, Hermus MC, van Sluis P, Roobeek I, Weis I, Voute PA, Schwab M, Versteeg R: N-myc enhances the expression of a large set of genes functioning in ribosome biogenesis and protein synthesis. EMBO 2001, 20:1383-1393
19. Frank J: The ribosome-a macromolecular machine par excellence Chem Biol 2000, 7:R133-R141
20. Vaarala MH, Porvari KS, Kyllonen AP, Mustonen MV, Lukkarinen O, Vihko PT: Several genes encoding ribosomal proteins are over-expressed in prostate-cancer cell lines: confirmation of L7a and L37 over-expression in prostate-cancer tissue samples. Int J Cancer 1998, 78:27-32
21. Pogue-Geile K, Geiser JR, Shu M, Miller C, Wool IG, Meisler AI, Pipas JM: Ribosomal protein genes are overexpressed in colorectal cancer: isolation of a cDNA clone encoding the human S3 ribosomal protein. Mol Cell Biol 1991, 11:3842-3849
22. Puder M, Barnard GF, Staniunas RJ, Steele GD Jr, Chen LB: Nucleotide and deduced amino acid sequence of human ribosomal protein L18. Biochim Biophys Acta 1993, 216:134-136
23. Denis MG, Chadeneau C, Lecabellec MT, LeMoullac B, LeMevel B, Meflah K, Lustenberger P: Over-expression of the S13 ribosomal protein in actively growing cells. Int J Cancer 1993, 55:275-280
24. Cao J, Cai X, Zheng L, Geng L, Shi Z, Pao CC, Zheng S: Characterization of colorectal-cancer-related cDNA clones obtained by subtractive hybridization screening. J Cancer Res Clin Oncol 1997, 123:447-451
25. Wang Y, Cheong D, Chan S, Hooi SC: Ribosomal protein L7a gene is up-regulated but not fused to the tyrosine kinase receptor as chimeric trk oncogene in human colorectal carcinoma. Int J Oncol 2000, 16:757-762
26. Parle-McDermott A, McWilliam P, Tighe O, Dunican D, Croke DT: Serial analysis of gene expression identifies putative metastasis-associated transcripts in colon tumour cell lines. Br J Cancer 2000, 83:725-728
27. Huang H, Colella S, Kurrer M, Yonekawa Y, Kleihues P, Ohgaki H: Gene expression profiling of low-grade diffuse astrocytomas by cDNA arrays. Cancer Res 2000, 60:6868-6874
28. Dong G, Loukinova E, Smith CW, Chen Z, Van Waes C: Genes differentially expressed with malignant transformation and metastatic tumor progression of murine squamous cell carcinoma. J Cell Biochem Suppl 1997, 28:90-100
29. Henry JL, Coggin DL, King CR: High-level expression of the ribosomal protein L19 in human breast tumors that overexpress erbB-2. Cancer Res 1993, 53:1403-1408
30. Starkey CR, Levy LS: Identification of differentially expressed genes in T-lymphoid malignancies in an animal model system. Int J Cancer 1995, 62:325-331
31. Daigneault L, Beaulieu R, Filion M, Gaboury L, Royal A, Babai F: Cloning and identification of genes differentially expressed in metastatic and non-metastatic rat rhabdomyosarcoma cell lines. Clin Exp Metastasis 1995, 13:345-356
32. Shuda M, Kondoh N, Tanaka K, Ryo A, Wakatsuki T, Hada A, Goseki N, Igari T, Hatsuse K, Aihara T, Horiuchi S, Shichita M, Yamamoto N, Yamamoto M: Enhanced expression of translation factor mRNAs in hepatocellular carcinoma. Anticancer Res 2000, 20:2489-249
33. Xu W, Wang S, Wang G, Wei H, He F, Yang X: Identification and characterization of differentially expressed genes in the early response phase during liver regeneration. Biochem Biophys Res Commun 2000, 278:318-325
34. Coppock D, Kopman C, Gudas J, Cina-Poppe DA: Regulation of the quiescence-induced genes: quiescin Q6, decorin, and ribosomal protein Biochem Biophys Res Commun 2000, 269:604-610
35. Bevort M, Leffers H: Down regulation of ribosomal protein mRNAs during neuronal differentiation of human NTERA2 cells. Differentiation 2000, 66:81-92
36. Curcic D, Glibetic M, Larson DE, Sells BH: GA-binding protein is involved in altered expression of ribosomal protein L32 gene. J Cell Biochem 1997, 65:287-307
37. Pappas IS, Vizirianakis IS, Tsiftsoglou AS: Cloning, sequencing and expression of a cDNA encoding the mouse 135a ribosomal protein during differentiation of murine erythroleukemia (MEL) cells. Cell Biol Int 2001, 25:629-634
38. Matsson H, Klar J, Draptchinskaia N, Gustavsson P, Carlsson B, Bowers D, de Bont E, Dahl N: Truncating ribosomal protein S19 mutations and variable clinical expression in Diamond-Blackfan anemia. Hum Genet 1999, 105:496-500
39. S Kajikawa, H Nakayama, M Suzuki, A Takashima, O Murayama, M Nishihara, M Takahashi, K Doi: Increased expression of rat ribosomal protein L4 mRNA in 5-azacytidine-treated PC12 cells prior to apoptosis. Biochem Biophys Res Commun 1998, 252:220-224
40. Chen FW, Ioannou YA: Ribosomal proteins in cell proliferation and apoptosis. Int Rev. Immunol 1999, 18:429-448
41. Khanna N, Reddy VG, Tuteja N, Singh N: Differential gene expression in apoptosis: identification of ribosomal protein S29 as an apoptotic inducer. Biochem Biophys Res. Commun 2000, 277:476-486
42. Lafontaine DL, Tollervey D: The function and synthesis of ribosomes. Nat. Rev. Mol. cell biol 2001, 2:514-520
43. Kleijn M, Welsh GI, Scheper GC, Voorma HO, Proud CG, Thomas AA: Nerve and epidermal growth factor induce protein synthesis and eIF2B activation in PC12 cells. J Biol Chem 1998, 273:5536-5541
44. Wool IG: Extraribosomal functions of ribosomal proteins. Trends Biochem Sci 1996, 21:164-165
45. Kumar KU, Srivastava SP, Kaufman RJ: Double-stranded RNA-activated protein kinase (PKR) is negatively regulated by 60S ribosomal subunit protein L18. Mol Cell. Biol 1999, 19:1116-1125
46. Nishiura H, Tanase S, Sibuya Y, Nishimura T, Yamamoto T: Determination of the cross-linked residues in homo-dimerization of S19 ribosomal protein concomitant with exhibition of monocyte chemotactic activity. Lab Invest 1999, 79:915-923
47. Nika J, Erickson FL, Hannig EM: Ribosomal protein L9 is the product of GRC5, a homolog of the putative tumor suppressor QM in S. cerevisiae. Yeast 1997, 13:1155-1166
48. Troy CM, Rabacchi SA, Hohl JB, Angelastro JM, Greene LA, Shelanski ML: Death in the balance: alternative participation of the caspase-2 and -9 pathways in neuronal death induced by nerve growth factor deprivation. J. Neurosci. 2001, 21:5007-5016