메뉴 건너뛰기




Volumn 25, Issue 4, 2002, Pages 513-519

Isolation and characterization of a new type of aerobic, oxalic acid utilizing bacteria, and proposal of Oxalicibacterium flavum gen. nov., sp. nov.

Author keywords

Oxalate; Oxalate utilizing bacteria; Oxalicibacterium flavum gen. nov., sp. nov.; Taxonomy; Proteobacteria

Indexed keywords

AMPICILLIN; BACITRACIN; BACTERIAL DNA; CHLORAMPHENICOL; DNA 16S; ERYTHROMYCIN; GENTAMICIN; OXALIC ACID; STREPTOMYCIN;

EID: 0036962213     PISSN: 07232020     EISSN: None     Source Type: Journal    
DOI: 10.1078/07232020260517643     Document Type: Article
Times cited : (22)

References (34)
  • 4
    • 0001193922 scopus 로고
    • Choice between autotrophy and heterotrophy in Pseudomonas oxalaticus. Growth in mixed substrates
    • Blackmore, A. M., Quayle, J. R.: Choice between autotrophy and heterotrophy in Pseudomonas oxalaticus. Growth in mixed substrates. Biochem. J. 107, 705-713 (1968).
    • (1968) Biochem. J. , vol.107 , pp. 705-713
    • Blackmore, A.M.1    Quayle, J.R.2
  • 5
    • 0014804591 scopus 로고
    • Microbial growth on oxalate by a route not involving carboxyligase
    • Blackmore, A. M., Quayle, J. R.: Microbial growth on oxalate by a route not involving carboxyligase. Biochem. J. 118, 53-59 (1970).
    • (1970) Biochem. J. , vol.118 , pp. 53-59
    • Blackmore, A.M.1    Quayle, J.R.2
  • 6
    • 0002667190 scopus 로고
    • Xanthomonas Dowson 1939, 87
    • (N.R. Krieg and J. G. Holt eds). Baltimore, Williams and Wilkins
    • Bradbury, J. F.: Genus II. Xanthomonas Dowson 1939, 87. vol. I, pp. 199-210. In: Bergey's manual of systematic bacteriology, (N.R. Krieg and J. G. Holt eds). Baltimore, Williams and Wilkins 1984.
    • (1984) Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 199-210
    • Bradbury, J.F.1    Genus, I.I.2
  • 7
    • 0016823320 scopus 로고
    • Isolation and characterization of some new oxalate-decomposing bacteria
    • Chandra, T. S., Shethna, Y. I.: Isolation and characterization of some new oxalate-decomposing bacteria. Antonie van Leeuwenhoek 41, 101-111 (1975).
    • (1975) Antonie van Leeuwenhoek , vol.41 , pp. 101-111
    • Chandra, T.S.1    Shethna, Y.I.2
  • 9
    • 0017740089 scopus 로고
    • Energy production and growth of Pseudomonas oxalaticus OX1 on oxalate and formate
    • Dijkhuizen, L., Wiersma, M., Harder, W.: Energy production and growth of Pseudomonas oxalaticus OX1 on oxalate and formate. Arch. Microbiol. 115, 229-236 (1977).
    • (1977) Arch. Microbiol. , vol.115 , pp. 229-236
    • Dijkhuizen, L.1    Wiersma, M.2    Harder, W.3
  • 11
    • 0020046820 scopus 로고
    • A taxonomic study of some Gram-negative facultatively methylotrophic bacteria
    • Green, P. N., Bousfield, I. J.: A taxonomic study of some Gram-negative facultatively methylotrophic bacteria. J. Gen. Microbiol. 128, 623-638 (1982).
    • (1982) J. Gen. Microbiol. , vol.128 , pp. 623-638
    • Green, P.N.1    Bousfield, I.J.2
  • 12
    • 0000210258 scopus 로고
    • Nouvelles recherches sur la distribution florale
    • Jaccard, P.: Nouvelles recherches sur la distribution florale. Bull. Soc. vaudoise Sci. Nat. 44, 226-270 (1908).
    • (1908) Bull. Soc. Vaudoise Sci. Nat. , vol.44 , pp. 226-270
    • Jaccard, P.1
  • 13
    • 0000437544 scopus 로고
    • The isolation and characteristics of an oxalate-decomposing organism
    • Jayasuriya, C. G. N.: The isolation and characteristics of an oxalate-decomposing organism. J. Gen. Microbiol. 12, 419-428 (1955).
    • (1955) J. Gen. Microbiol. , vol.12 , pp. 419-428
    • Jayasuriya, C.G.N.1
  • 14
    • 84986380920 scopus 로고
    • Numerical analysis and DNA-DNA hybridization studies on Xanthobacter and emendation of Xanthobacter flavus
    • Jenni, B., Aragno, M., Wiegel, J. K. W.: Numerical analysis and DNA-DNA hybridization studies on Xanthobacter and emendation of Xanthobacter flavus. System. Appl. Microbiol. 9, 247-253 (1987).
    • (1987) System. Appl. Microbiol. , vol.9 , pp. 247-253
    • Jenni, B.1    Aragno, M.2    Wiegel, J.K.W.3
  • 16
    • 0000732090 scopus 로고
    • Evolution of protein molecules
    • (H. N. Munro ed.) New York: Academic Press
    • Jukes, T. H., Cantor, C. R.: Evolution of protein molecules. In. Mammalian protein metabolism, pp.21-132. (H. N. Munro ed.) New York: Academic Press (1969).
    • (1969) Mammalian Protein Metabolism , pp. 21-132
    • Jukes, T.H.1    Cantor, C.R.2
  • 18
    • 0031789346 scopus 로고    scopus 로고
    • Isolation and phylogenetic analysis of aerobic copiotrophic ultramicrobacteria from urban soil
    • Lizuka, T., Yamanaka, S., Nishiyama, T., Hiraishi, A.: Isolation and phylogenetic analysis of aerobic copiotrophic ultramicrobacteria from urban soil. J. Gen. Appl. Microbiol. 44, 75-84 (1998).
    • (1998) J. Gen. Appl. Microbiol. , vol.44 , pp. 75-84
    • Lizuka, T.1    Yamanaka, S.2    Nishiyama, T.3    Hiraishi, A.4
  • 19
    • 0014734528 scopus 로고
    • Correlation of melting temperature and cesium chloride buoyant density of bacterial DNA
    • Mandel, M., Igambi, L., Bergendahl, J., Dodson, M. L., and Scheltgen, J. R.: Correlation of melting temperature and cesium chloride buoyant density of bacterial DNA. J. Bacteriol. 101, 333-338 (1970).
    • (1970) J. Bacteriol. , vol.101 , pp. 333-338
    • Mandel, M.1    Igambi, L.2    Bergendahl, J.3    Dodson, M.L.4    Scheltgen, J.R.5
  • 20
    • 0000803252 scopus 로고
    • Family I: Pseudomonadaceae
    • 1984, (N. R. Krieg and J. G. Holt eds). Baltimore, Williams and Wilkins
    • Palleroni, N. J. 1984. Family I: Pseudomonadaceae, vol. I, pp. 141-199. In: Bergey's manual of systematic bacteriology, (N. R. Krieg and J. G. Holt eds). Baltimore, Williams and Wilkins 1984.
    • (1984) Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 141-199
    • Palleroni, N.J.1
  • 21
    • 0000179021 scopus 로고
    • Carbon assimilation by Pseudomonas oxalaticus (OX1). 4. Metabolism of oxalate in cell-free extracts of the organism grown on oxalate
    • Quayle, J. R., Keech, D. B., Taylor, G. A.: Carbon assimilation by Pseudomonas oxalaticus (OX1). 4. Metabolism of oxalate in cell-free extracts of the organism grown on oxalate. Biochem. J. 78, 225-236 (1961).
    • (1961) Biochem. J. , vol.78 , pp. 225-236
    • Quayle, J.R.1    Keech, D.B.2    Taylor, G.A.3
  • 22
    • 0343962266 scopus 로고    scopus 로고
    • T) (Khambata and Bhat, 1953) and its description in the Genus Ralstonia as Ralstonia oxalatica comb. nov.
    • T) (Khambata and Bhat, 1953) and its description in the Genus Ralstonia as Ralstonia oxalatica comb. nov. System. Appl. Microbiol. 23, 206-209 (2000).
    • (2000) System. Appl. Microbiol. , vol.23 , pp. 206-209
    • Sahin, N.1    Isik, K.2    Tamer, A.U.3    Goodfellow, M.4
  • 24
    • 0036616381 scopus 로고    scopus 로고
    • Isolation, characterization and numerical taxonomy of novel oxalate-oxidizing bacteria
    • Sahin, N., Gokler, I., Tamer, A. U.: Isolation, characterization and numerical taxonomy of novel oxalate-oxidizing bacteria. J. Microbiol. 40, 109-118 (2002).
    • (2002) J. Microbiol. , vol.40 , pp. 109-118
    • Sahin, N.1    Gokler, I.2    Tamer, A.U.3
  • 25
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., Nei, M.: The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 406-425 (1987).
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 26
    • 0001327485 scopus 로고
    • Some thoughts on bacterial classification
    • Sneath, P. H. A.: Some thoughts on bacterial classification. J. Gen. Microbiol. 17, 184-200 (1957a).
    • (1957) J. Gen. Microbiol. , vol.17 , pp. 184-200
    • Sneath, P.H.A.1
  • 27
    • 9444222978 scopus 로고
    • The application of computers to taxonomy
    • Sneath, P. H. A.: The application of computers to taxonomy. J. Gen. Microbiol. 17, 206-226 (1957b).
    • (1957) J. Gen. Microbiol. , vol.17 , pp. 206-226
    • Sneath, P.H.A.1
  • 28
    • 0000825481 scopus 로고
    • A statistical method for evaluating systematic relationships
    • Sokal, R. R., Michener, C. D.: A statistical method for evaluating systematic relationships. Univ. kansas Sci. Bull. 38, 1409-1438 (1958).
    • (1958) Univ. Kansas Sci. Bull. , vol.38 , pp. 1409-1438
    • Sokal, R.R.1    Michener, C.D.2
  • 30
    • 0002168318 scopus 로고
    • Isolement, caractérisation et essai d'identification de bactéries capables d'utiliser 1'oxalate comme seule source de carbone et d'énergie
    • Tamer, A. U., Aragno, M.: Isolement, caractérisation et essai d'identification de bactéries capables d'utiliser 1'oxalate comme seule source de carbone et d'énergie. Bull. Soc. neuchatel. Sci. nat. 103, 91-104 (1980).
    • (1980) Bull. Soc. Neuchatel. Sci. Nat. , vol.103 , pp. 91-104
    • Tamer, A.U.1    Aragno, M.2
  • 31
    • 0012753640 scopus 로고
    • Genomic relation among nine strains of oxalate utilizing bacteria
    • Tamer, A. Ü., Aragno, M., Jenni, B.: Genomic relation among nine strains of oxalate utilizing bacteria. Turk J. Biol. 17, 115-119 (1993).
    • (1993) Turk. J. Biol. , vol.17 , pp. 115-119
    • Tamer, A.Ü.1    Aragno, M.2    Jenni, B.3
  • 33
    • 0027968068 scopus 로고
    • Clustal w: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G., Gibson, T. J.: Clustal w: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acid Res. 22, 4673-4680 (1994).
    • (1994) Nucleic Acid Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 34
    • 0027156708 scopus 로고
    • Treecon: A software package for the construction and drawing of evolutionary trees
    • Van De Peer, Y., De Wachter, R.: Treecon: A software package for the construction and drawing of evolutionary trees. Comput. Appl. Biosci. 9, 177-182 (1993).
    • (1993) Comput. Appl. Biosci. , vol.9 , pp. 177-182
    • Van De Peer, Y.1    De Wachter, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.