Development of RAPD and SCAR markers linked to the Pvr4 locus for resistance to PVY in pepper (Capsicum annuum L.)

Theoretical and Applied Genetics

Volumn 105, Issue 6-7, 2002, Pages 1067-1074

  Arnedo Andres M S ^a   Gil Ortega, R ^a   Luis Arteaga, M ^a   Hormaza, J I ^a,b  

^a Instituto Agroalimentario de Aragón IA2   (Spain)

^b CSIC   (Spain)

Author keywords

BSA; Capsicum annuum; Marker assisted selection; PVY; RAPD; SCAR

Indexed keywords

DISEASES; DNA; FRUITS; GENES; VIRUSES;

SEGREGATING PROGENIES;

GENETIC ENGINEERING;

CAPSICUM; CAPSICUM ANNUUM; EMBRYOPHYTA; POTATO VIRUS Y; POTYVIRUS; SOLANUM TUBEROSUM;

EID: 0036950023     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-002-1058-2     Document Type: Article

References (49)

1. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 25:3389-3402
2. Arnedo-Andrés M (2001) Genetic and Molecular Analysis of Resistance in Pepper (Capsicum annuum L.) to Different PVY Pathotypes. PhD thesis, Zaragoza University
3. Arnedo-Andrés M, Luis Arteaga M, Gil Ortega R (1998) Response of 'Serrano Criollo de Morelos-334' to PVY pathotypes. Proc 10th Eucarpia Meeting Genet Breed Capsicum Eggplant, pp 105-109
4. Caranta C, Palloix A (1996) Both common and specific genetic factors are involved in polygenic resistance of pepper to several potyviruses. Theor Appl Genet 92:15-20
5. Caranta C, Palloix A, Gebre-Selassie K, Lefebvre V Moury B, Daubèze AM (1996) A complementation of two genes originating from susceptible Capsicum annuum lines confers a new and complete resistance to pepper veinal mottle virus. Phytopathology 86:739-743
6. Caranta C, Lefebvre V, Palloix A (1997) Polygenic resistance of pepper to potyviruses consists of a combination of isolate-specific and broad spectrum quantitative trait loci. Mol Plant-Microbe Interact 10:872-878
7. Caranta C, Thabuis A, Palloix A (1999) Development of a CAPS marker for the Pvr4 locus: a tool for pyramiding potyvirus resistance genes in pepper. Genome 42:1111-1116
8. Clark MF, Adams AN (1977) Characteristics of the microplate method of enzyme-linked immunosorbent assay for the detection of plant viruses. J Gen Virol 34:475-483
9. Cook AA (1961) A mutation for resistance to potato virus Y in pepper. Phytopathology 50:364-367
10. Cook AA (1962) Isolation of a mutant strain of potato virus Y. Plant Dis Rep 46:569
11. Cook AA (1963) Genetics of response in pepper to three strains of potato virus Y. Phytopathology 53:720-722
12. De Bokx JA, Huttinga H (1981) Potato virus Y. CMI/AAB Descriptions of Plant Viruses No. 242
13. Djian-Caporalino C, Pijarowski L, Jaunel A, Lefebvre V, Caranta C, Chauvet JC, Blattes A, Palloix A, Dalmasso A, Abad P (1998) Characterising and fine mapping of the Me3 gene conferring heat-stable resistance to root-knot nematode (Meloidogyne spp) in pepper. Proc 10th Eucarpia Meet Genet Breed Capsicum Eggplant, pp 125-128
14. Dogimont C, Palloix A, Daubeze AM, Marchoux G, Gebre-Selassie KE, Pochard E (1996) Genetic analysis of broad spectrum resistance to potyviruses in haplodiploid progenies of pepper (Capsicum annuum L.). Euphytica 88:231-239
15. Doyle JJ, Doyle JL (1987) A rapid isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19:11-15
16. Gebre-Selassie KE, Marchoux G, Delecolle B, Pochard E (1985) Variabilité naturelle des souches du virus Y de la pomme de terre dans les cultures de piment du sud-est de la France. Caractérisation et classification en pathotypes. Agronomie 5:621-630
17. Grube RC, Blauth JR, Arnedo-Andrés MS, Caranta C, Jahn MK (2000) Identification and comparative mapping of a dominant potyvirus resistance gene cluster in Capsicum. Theor Appl Genet 101:852-859
18. Guerrero-Moreno A, Laborde JA (1980) Current status of pepper breeding for resistance to Phytophthora capsici in Mexico. Proc 4th Eucarpia Meet Genet Breed Capsicum Eggplant, pp 52-56
19. Haley SD, Afanador L, Kelly JD (1994) Selection for monogenic pest resistance traits with coupling and repulsion-phase RAPD markers. Crop Sci 34:1061-1066
20. Hormaza JI (1999) Early selection in cherry combining RAPDs with embryo culture. Scien Hort 79:121-126
21. Hormaza JI, Dollo L, Pollito VS (1994) Identification of a RAPD marker linked to sex determination in Pistacia vera using bulked segregant analysis. Theor Appl Genet 89:9-13
22. Jahn M, Paran I, Hoffmann K, Radwanski ER, Livingstone KD, Grube RC, Aftergoot E, Lapidot M, Moyer J (2000) Genetic mapping of the Tsw locus for resistance to the tospovirus tomato spotted wilt virus in Capsicum spp. and its relationship to the Sw-5 gene for resistance to the same pathogen in tomato. Mol Plant-Microbe Interact 13:673-682
23. Konieczny A, Ausubel FM (1993) A procedure for mapping Arabidopsis mutations using co-dominant ecotype specific PCR based markers. Plant J 4:403-410
24. Kosambi DD (1944) The estimation of map distance from recombination values. Ann Eugen 12:172-175
25. Kyle MM, Palloix A (1997) Proposed revision of nomenclature for potyvirus resistance genes in Capsicum. Euphytica 97:183-188
26. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ, Lincoln SE, Newburg L (1987) MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genetics 1:174-181
27. Lefebvre V, Palloix A, Caranta C, Pochard E (1995) Construction of an intraspecific integrated linkage map of pepper using molecular markers and doubled-haploid progenies. Genome 38:112-121
28. Livingstone KD, Lackney VK, Blauth JR, Wijk RV, Jahn MK (1999) Genome mapping in Capsicum and the evolution of genome structure in Solanaceae. Genetics 152:1183-1202
29. Luis Arteaga M, Gil Ortega R (1986) Biological characterization of PVY as isolated form pepper in Spain. Proc 4th Eucarpia Meet Genet Breed Capsicum Eggplant, pp 183-188
30. Luis Arteaga M, Arnedo Andrés M, Gil Ortega R (1997) New potato virus Y pathotype in pepper. Capsicum Eggplant Newslett 16:85-86
31. Llave C, Martínez B, Díaz-Ruíz JR, López-Abella D (1999) Serological analysis and coat protein sequence determination of potato virus Y (PVY) pepper pathotypes and differentiation from other PVY strains. Eur J Plant Pathol 105:847-857
32. Marchoux G, Gebre-Selassie K, Quiot JB (1976) Observations préliminaires concernant les souches et les plantes réservoirs du virus Y de la pomme de terre dans le Sud-Est de la France. Agric Conspectus Scientifique 39:541-552
33. Marrou J (1967) Amélioration des méthodes de transmission mécanique des virus par adsoption des inhibiteurs d'infection sur charbon végetal. C.R. Acad Agricole France 53:972-981
34. Messeguer R, Ganal M, de Vicente MC, Young ND, Bolkan H, Tanksley SD (1991) High resolution RFLP map around the root knot nematode resistance gene (Mi) in tomato. Theor Appl Genet 82:529-536
35. Michelmore RW, Paran I, Kesseli V (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: A rapid method to detect markers in specific regions by using segregating populations. Proc Natl Acad Sci USA 88:9828-9832
36. Moury B, Pflieger S, Blattes A, Lefebvre V, Palloix A (2000) A CAPS marker to assist selection of tomato spotted wilt virus (TSWV) resistance in pepper. Genome 43:137-142
37. Murphy FA, Fauquet CM, Bishop DHL, Ghabrial SA, Jarvis AW, Martelli GP, Mayo MA, Summers MD (1995) Virus taxonomy. Sixth report of the International Committee on Taxonomy of viruses. Springer-Verlag Wien New York, Arch Virol suplement 10
38. Murphy JF, Blauth JR, Livingstone KD, Lackney VK, Kyle Jahn M (1998) Genetic mapping of the pvr1 locus in Capsicum spp. and evidence that distinct potyvirus resistance loci control responses that differ at the whole plant and cellular levels. Mol Plant-Microbe Interact 11:943-951
39. Nagai H, Costa AS (1972) Four new pepper varieties resistant to virus Y in Brasil. Proc 2nd Eucarpia Meet Genet Breed Capsicum, pp 283-287
40. Paran I, Michelmore RW (1993) Development of reliable PCR-based markers linked to downy mildew resistance genes in lettuce. Theor Appl Genet 85:985-993
41. Pasko P, Luis Arteaga M, Gil Ortega R (1992) Different kinds of reactions to PVY-1-2 in Capsicum annuum L. cv 'SCM-334'. Proc 8th Eucarpia Meet Genet Breed Capsicum Eggplant, pp 153-156
42. Paterson AH, Lander ES, Hewitt JD, Peterson S, Lincoln SE, Tanksley SD (1988) Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment length polymorphisms. Nature 335:721-726
43. Pierre M, Noël L, Lahaye T, Ballvora A, Veuskens J, Ganal M, Bonas U (2000) High-resolution genetic mapping of the pepper resistance locus Bs3 governing recognition of the Xanthomonas campestris pv vesicatoria AvrBse protein. Theor Appl Genet 101:255-263
44. Prince JP, Loaiza-Figueroa F, Tanksley SD (1992) Restriction fragment length polymorphism and genetic distance among Mexican accessions of Capsicum. Genome 35:726-732
45. Sambrook L, Fritsch EF, Maniatis T (1989) Molecular Cloning: A Laboratory Manual, 2nd Ed. Cold Spring Harbour Laboratory, Cold Spring Harbor, New York
46. Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 5463-5467
47. Soto MJ, Luis Arteaga M, Ferreres A, Ponz F (1994) Limited degree of serological variability in pepper strains of potato virus Y as revealed by analysis with monoclonal antibodies. Ann Appl Biol 124:37-43
48. Staub JE, Serquen FC, Gupta M (1996) Genetic markers, map construction and their application in plant breeding. Hortscience 31:729-741
49. Williams JGK, Kubelik AR, Livak KJ, Rafalsky JA, Tingey SV (1990) DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18:6531-6535