Mapping of DNA markers to arms and sub-arm regions of Nicotiana sylvestris chromosomes using aberrant alien addition lines

Theoretical and Applied Genetics

Volumn 105, Issue 1, 2002, Pages 8-15

  Chen, C C ^a   Chen, S K ^a   Liu, M C ^a   Kao, Y Y ^a  

^a NATIONAL TAIWAN UNIVERSITY   (Taiwan)

Author keywords

Aberrant monosomic addition line; Deletion mapping; Fluorescence in situ hybridization; Nicotiana sylvestris; RFLP analysis; Ribosomal DNA

Indexed keywords

DNA; GENES; PLANTS (BOTANY);

SESQUIDIPLOID HYBRID;

BIOMARKERS;

EMBRYOPHYTA; NICOTIANA PLUMBAGINIFOLIA; NICOTIANA SYLVESTRIS;

EID: 0036923834     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-001-0829-5     Document Type: Article

References (31)

1. Ananiev EV, Phillips RL, Rines HW (1998a) Complex structure of knob DNA on maize chromosome 9: Retrotransposon invasion into heterochromatin. Genetics 149:2025-2037
2. Ananiev EV, Phillips RL, Rines HW (1998b) A knob-associated tandem repeat in maize capable of forming fold-back DNA segments: Are chromosome knobs megatransposons? Proc Natl Acad Sci USA 95:10785-10790
3. Ananiev EV, Phillips RL, Rines HW (1998c) Chromosome-specific molecular organization of maize (Zea mays L.) centromeric regions. Proc Natl Acad Sci USA 95:13073-13078
4. Biyashev RM, Ragab RA, Maughan PJ, Saghai-Maroof MA (1997) Molecular mapping, chromosomal assignment, and genetic diversity analysis of phytochrome loci in barley (Hordeum vulgare). J Hered 88:21-26
5. Bland MM, Matzinger DF, Leving CS III (1985) Comparison of the mitochondrial genome of Nicotiana tabacum with its progenitor species. Theor Appl Genet 69:535-541
6. Chang YS (1996) The Nucleolar Organizer Regions of Five Nicotiana Species. MS thesis, National Taiwan University, Taipei, Taiwan
7. Chen CM, Wang CT, Wang CJ, Ho CH, Kao YY, Chen CC (1997) Two tandemly repeated telomere-associated sequences in Nicotiana plumbaginifolia. Chrom Res 5:561-568
8. Chung MC, Ning CN, Wu HK (1993) Localization of ribosomal RNA genes on rice chromosomes. Bot Bull Acad Sinica 34:43-55
9. Cox AV, Bennett ST, Parokonny AS, Kenton A, Callimassia MA, Bennett MD (1993) Comparison of telomere locations using a PCR-generated synthetic probe. Ann Bot 72:239-247
10. Cox DR, Burmeister M, Price ER, Kim S, Myers RM (1990) Radiation hybrid mapping: A somatic cell genetics method for constructing high-resolution maps of mammalian chromosomes. Science 250:245-250
11. Darlington CD (1939) Misdivision and the genetics of the centromere. J Genet 37:341-364
12. Dolezěl J, Lucretti S, Schubert I (1994) Plant chromosome analysis and sorting by flow cytometry. Crit Rev Plant Sci 13:275-309
13. Endo TR (1988) Induction of chromosomal structural changes by a chromosome of Aegilops cylindrica L. in common wheat. J Hered 79:366-370
14. Endo TR, Gill BS (1996) The deletion stocks of common wheat. J Hered 87:295-307
15. Faris JD, Haen KM, Gill BS (2000) Saturation mapping of a generich recombination hot spot region in wheat. Genetics 154:823-835
16. Ferguson-Smith MA (1993) From chromosome number to chromosome map: The contribution of human cytogenetics to genome mapping. Chromosomes Today 11:3-19
17. Gray JC, Kung SD, Wildman SG (1974) Origin of Nicotiana tabacum L. detected by polypeptide composition of fraction I protein. Nature 252:226-227
18. Huang HC, Chen CC (1988) Genome multiplification in cultured protoplasts of two Nicotiana species. J Hered 79:28-32
19. Kiss T, Kis M, Solymosy F (1989) Nucleotide sequence of a 25S rRNA gene from tomato. Nucleic Acids Res 17:796
20. Li LJ, Arumuganathan K, Rines HW, Phillips RL, Riera-Lizarazu O, Sandhu D, Zhou Y, Gill KS (2001) Flow cytomettic sorting of maize chromosome 9 from an oat-maize chromosome addition line. Theor Appl Genet 102:658-663
21. Lim JY, Kovarik A, Matyásěk R, Bezděk M, Lichtenstein CP, Leitch AR (2000a) Gene conversion of ribosomal DNA in Nicotiana tabacum is associated with undermethylated, decondensed and probably active gene units. Chromosoma 109:161-172
22. Lim KY, Matyásěk R, Lichtenstein CP, Leitch AR (2000b) Molecular cytogenetic analyses and phylogenetic studies in the Nicotiana section Tomentosae. Chromosoma 109:245-258
23. Lin RF, Chen CC (1990) Cytological studies of interspecific somatic hybrids in Nicotiana. Bot Bull Acad Sinica 31:179-187
24. Lin TY, Kao YY, Lin S, Lin RF, Chen CM, Huang CH, Wang CK, Lin YZ, Chen CC (2001) A genetic linkage map of Nicotiana plumbaginifolia/Nicotiana longiflora based on RFLP and RAPD markers. Theor Appl Genet (in press)
25. McGrath JM, Quiros CF, Harada JJ, Landry BS (1990) Identification of Brassica oleracea monosomic alien chromosome addition lines with molecular markers reveals extensive gene duplication. Mol Gen Genet 223:198-204
26. Olmstead R, Palmer JD (1991) Chloroplast DNA and systematics of the Solanaceae. In: Hwakes JG, Lester RN, Nee M, Estrada N (eds) Solanaceae III. Taxonomy, Chemistry, Evolution. Royal Botanic Gardens, Kew, London, pp 161-168
27. Parokonny AS, Kenton AY, Gleba YY, Bennett MD (1992) Genome reorganization in Nicotiana asymmetric somatic hybrids analyzed by in situ hybridization. Plant J 2:863-874
28. Riera-Lizarazu O, Vales MI, Ananiev EV, Rines HW, Phillips RL (2000) Production and characterization of maize chromosome 9 radiation hybrids derived from an oat-maize addition line. Genetics 156:327-339
29. Suen DF, Wang CK, Lin RF, Kao YY, Lee FM, Chen CC (1997) Assignment of DNA markers to Nicotiana sylvestris chromosomes using monosomic alien addition lines. Theor Appl Genet 94:331-337
30. Tsujimoto H, Yamada T, Sasakuma T (1997) Molecular structure of a wheat chromosome end healed after gametocidal gene-induced breakage. Proc Natl Acad Sci USA 94:3140-3144
31. Volkov RA, Bachmair A, Panchuk II, Kostyshyn SS, Schweizer D (1999) 25S-18S rDNA intergenic spacer of Nicotiana sylvestris (Solanaceae): Primary and secondary structure analysis. Plant Syst Evol 218:89-97