Constructing optimal convolutional code models for prokaryotic translation initiation

Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings

Volumn 3, Issue , 2002, Pages 2188-2189

  May, Elebeoba E ^a   Vouk, Mladen A ^a   Bitzer, Donald L ^a   Rosnick, David I ^a  

^a North Carolina State University   (United States)

Author keywords

Coding theory; Genetic algorithms; Translation initiation

Indexed keywords

AMINO ACIDS; CONVOLUTIONAL CODES; ERROR ANALYSIS; ERROR CORRECTION; ESCHERICHIA COLI; GENETIC ALGORITHMS; RNA;

ERROR-CONTROL CODES; OPTIMAL CONVOLUTIONAL CODE MODELS; PROKARYOTIC TRANSLATION INITIATION; RIBOSOMES; UNEQUAL ERROR PROTECTION;

BIOMEDICAL ENGINEERING;

EID: 0036911757     PISSN: 05891019     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (10)

1. G. Battail, "Does information theory explain biological evolution?," Europhysics Letters, vol. 40, no. 3, pp. 343-348, November 1997.
2. Thomas D. Schneider, "Theory of Molecular Machines. I. Channel Capacity of Molecular Machines," Journal of Theoretical Biology, vol. 148, pp. 83-123, 1991.
3. Elebeoba E. May, Mladen A. Vouk, Donald L. Bitzer, and David I. Rosnick, "The Ribosome as a Table-Driven Convolutional Decoder for the Escherichia coli K-12 Translation Initiation System," in World Congress on Medical Physics and Biomedical Engineering Conference., 2000.
4. Elebeoba E. May, Mladen A. Vouk, Donald L. Bitzer, and David I. Rosnick, "Coding Theory Based Maximum-Likelihood Classification of Translation Initiation Regions in Escherichia coli K-12," in 2000 Biomedical Engineering Society Annual Meeting., 2000.
5. Yu. G. Savchenko and A. A. Svistel'nik, "An Approach to Pattern Recognition Systems," Engineering Cybernetics, no. 2, pp. 144-146, 1968.
6. Tadashi Wadayama, Koichiro Wakasugi, and Masao Kasahara, "An 8-Dimensional Trellis-Coded 8-PSK with Non-Zero Crossing Constraint," IEICE Trans. Fundamentals, vol. E77-A, no. 8, pp. 1274-1280, August 1994.
7. Robert Kotrys and Piotr Remlein, "The Genetic Algorithm used in search of the good TCM codes," in 4th International Workshop on Systems, Signals and Image Processing, IWSSIP'97., 1997, pp. 53-57.
8. Tiffany M. Barnes, "Using Genetic Algorithms to Find the Best Generators for Half-Rate Convolutional Coding," North Carolina State University, Raleigh, NC, 1994.
9. David A. Coley, An Introduction to Genetic Algorithms for Scientists and Engineers, World Scientific Publishing Co. Pte. Ltd., Singapore, 1999.
10. David I. Rosnick, Free Energy Periodicity and Memory Model for E. coli Codings, Ph.D. thesis, North Carolina State University, Raleigh, NC, 2001.