PARENTE: Computer program for parentage analysis

Journal of Heredity

Volumn 93, Issue 6, 2002, Pages 458-459

  Cercueil, A ^a,b   Bellemain, E ^b   Manel, S ^b  

^a IMAG CNRS   (France)

^b UNIV GRENOBLE ALPES   (France)

Author keywords

[No Author keywords available]

Indexed keywords

MOLECULAR MARKER;

ALLELE; COMPUTER PROGRAM; DIPLOIDY; GENE FREQUENCY; GENE LINKAGE DISEQUILIBRIUM; GENE LOCUS; GENETIC COMPATIBILITY; GENOTYPE; MATING; MUTATION RATE; NULL ALLELE; PARENTHOOD; PEDIGREE; PRIORITY JOURNAL; PROBABILITY; REPRODUCTION; SHORT SURVEY; X CHROMOSOME LINKAGE;

FEMALE; GENETIC MARKERS; HUMANS; MALE; MODELS, GENETIC; PATERNITY; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; SOFTWARE;

EID: 0036881896     PISSN: 00221503     EISSN: None     Source Type: Journal    
DOI: 10.1093/jhered/93.6.458     Document Type: Short Survey

References (22)

1. Bernatchez L and Duchesne P, 2000. Individual-based genotype analysis in studies of parentage and population assignment: how many loci, how many alleles? Can Fish Aquat Sci 57:1-12.
2. Brotherton PNM, Pemberton J, Komers P, and Malarky G, 1997. Genetic and behavioural evidence of monogamy in a mammal, Kirk's dik-dik. Proc R Soc Lond B Biol Sci 264:675-681.
3. Clapham PJ and Palsboll PJ, 1997. Molecular analysis of paternity shows promiscuous mating in female humpback whales (Megaptera novaeangliae, Borowski). Proc R Soc Lond B Biol Sci 264:95-98.
4. Coltman DW, 1999. Male reproductive success in a promiscuous mammal: behavioural estimates compared with genetic paternity. Mol Ecol 8(7):1199-1209.
5. Danzmann RG, 1997. PROBMAX: a computer program for assigning unknown parentage in pedigree analysis from genotypic pools of parents and progeny. J Hered 88:333.
6. Gerber S, Marlette S, Streiff R, Boénès C, and Kremer A, 2000. Comparison of microsatellites and amplified fragment length polymorphism markers for parentage analysis. Mol Ecol 9:1037-1048.
7. Girman DJ, Mills MGL, Geffen E, and Wayne RK, 1997. A molecular genetic analysis of social structure, dispersal, and interpack relationships of the African wild dog (Lycaon pictus). Behav Ecol Sociobiol 40:187-198.
8. Goossens B, Graziani L, and Waits L, 1998. Extra-pair paternity in the monogamous Alpine marmot revealed by nuclear DNA microsatellite analysis. Behav Ecol Sociobiol 43:281-288.
9. Heller KG, Achmann R, and Witt K, 1993. Monogamy in the bat Rhinolophus sedulus? Z Säugetierkunde 58:376-377.
10. Luikart G and England P, 1999. Statistical analysis of microsatellite DNA data. Trends Ecol Evol 14:253-256.
11. Marshall TC, Slate J, Kruuk LEB, and Pemberton JM, 1998. Statistical confidence for likelihood-based paternity inference in natural populations. Mol Ecol 7:639-655.
12. McRae SB and Kovacs KM, 1994. Paternity exclusion by DNA fingerprinting, and mate guarding in the hooded seal Cystophora cristata. Mol Ecol 3:101-107.
13. Neff BD, Repka J, and Gross MR, 2000a. Parentage analysis with incomplete sampling of candidate parents and offspring. Mol Ecol 9:515-528.
14. Neff, BD, Repka J, and Gross MR, 2000b. Statistical confidence in parentage analysis with incomplete sampling: how many loci and offspring are needed? Mol Ecol 9:529-539.
15. Neff BD, Repka J, and Gross MR, 2001. A Bayesian framework for parentage analysis: the value of genetic and other biological data. Theor Popul Biol 59:315-331.
16. Nielsen R, Mattila DK, Clapham PJ, and Palsboll PJ, 2001. Statistical approaches to paternity analysis in natural populations and applications to the North Atlantic humpback whale. Genetics 157:1673-1682.
17. Pemberton JM, Albon SD, Guiness FE, Clutton-Brock TH, and Dover GA, 1992. Behavioural estimates of male mating success tested by DNA fingerprinting in a polygynous mammal. Behav Ecol 3:66-75.
18. Petrie M and Kempenaers B, 1998. Extra-pair paternity in birds: explaining variations between species and populations. Trends Ecol Evol 13(2):52-58.
19. Queller DC, Strassmann JE, and Hugues CR, 1993. Microsatellites and kinship. Trends Ecol Evol 8(8):285-288.
20. Ribble DO, 1991. The monogamous mating system of Peromyscus californicus as revealed by DNA fingerprint. Behav Ecol Sociobiol 29:161-166.
21. Sillero-Zubiri C, Gottelli D, and Macdonald DW, 1996. Male phylopatry, extra-pack copulations and in-breeding avoidance in Ethiopian wolves. Behav Ecol Sociobiol 38:331-340.
22. Sunnucks P, 2000. Efficient genetic markers for population biology. Trends Ecol Evol 15(5):199-203.