Phylogeographical variation of chloroplast DNA in holm oak (Quercus ilex L.)

Molecular Ecology

Volumn 11, Issue 11, 2002, Pages 2327-2336

  Lumaret, R ^a   Mir, C ^a   Michaud, H ^a   Raynal, V ^a  

^a CNRS   (France)

Author keywords

cpDNA RFLP variation; Evergreen Mediterranean oaks; Morphological convergence; Phylogeography; Q. ilex L.

Indexed keywords

CHLOROPLAST DNA;

ARTICLE; CHIMERA; GENETIC VARIABILITY; GENETICS; HAPLOTYPE; MUTATION; OAK; PHYLOGENY; POPULATION GENETICS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SOUTHERN EUROPE;

CHIMERA; DNA, CHLOROPLAST; GENETICS, POPULATION; HAPLOTYPES; MEDITERRANEAN REGION; MUTATION; PHYLOGENY; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; QUERCUS; VARIATION (GENETICS);

EMBRYOPHYTA; ILEX; QUERCUS; QUERCUS ILEX;

EID: 0036847386     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.2002.01611.x     Document Type: Article

References (37)

1. Abel A (1902) De quelques Quercus hybrides ou supposés tels, de Quercus ilex et coccifera. Bulletin de l'Académie Internationale de Géographie. Botanique, 3, 129-131.
2. Barbero M, Loisel R, Quezel P. (1992) Biogeography, ecology and history of Quercus ilex ecosystems in Mediterranean region. Vegetatio, 99-100, 14-19.
3. Belahbib N, Pemonge MH, Ouassou A, Sbay H, Kremer A, Petit RJ (2001) Frequent cytoplasmic exchanges between oak species that are not closely related: Quercus suber and Q. ilex in Morocco. Molecular Ecology, 10, 2003-2012.
4. Brewer S, Cheddadi R, de Beaulieu JL, Reille M (2002) Data contributors The spread of deciduous Quercus throughout Europe since the last glacial period. Forest Ecology and Management, 156, 27-48.
5. Camus A (1938) Les Chênes. Monographie du genre Quercus 3. Paul Lechevallier, Paris.
6. Carrión JS, Parra I, Navarro C, Munuera M (2000) Past distribution and ecology of the cork oak (Quercus suber) in the Iberian peninsula: A pollen-analytical approach. Diversity and Distributions, 6, 29-44.
7. Duggleby RG, Kinns H, Rood J (1981) A computer program for determining the size of DNA restriction fragments. Critical Reviews in Plant Science, 110, 49-55.
8. Dumolin S, Demesure B, Petit RJ (1995) Inheritance of chloroplast and mitochondrial genomes in pedunculate oak investigated with an efficient PCR method. Theoretical and Applied Genetics, 91, 1253-1256.
9. Elena-Rossello JA, Lumaret R, Cabrera E, Michaud H (1992) Evidence for hybridization between sympatric holm-oak and cork-oak in Spain based on diagnostic enzyme markers. Vegetatio, 99-100, 115-118.
10. Ferris C, King RA, Vainola R, Hewitt GM (1998) Chloroplast DNA recognises three refugial sources of European oaks and shows independent eastern and western immigrations to Finland. Heredity, 80, 584-593.
11. Ferris C, Oliver RP, Davy AJ, Hewitt GM (1993) Native oak chloroplasts reveal an ancient divide migration routes of oaks into Britain. Molecular Ecology, 2, 337-344.
12. Hewitt GM (1993) Post-glacial distribution and species substructure. Lessons from pollen, insects and hybrid zones. In: Evolutionary Patterns and Processes (eds Lees DR, Edwards D). Linnean Society Symposium Series no. 14, pp. 97-123. Academic Press, London.
13. Hewitt GM (1999) Post-glacial re-colonization of European biota. Biological Journal of the Linnean Society, 68, 87-112.
14. Ibrahim K, Nichols RA, Hewitt GM (1996) Spatial patterns of genetic variation generated by different forms of dispersal during range expansion. Heredity, 77, 282-291.
15. Lebreton Ph, Barbéro M, Quézel P (2001) Morphometric and biochemical contribution to the structuration nans systematics of the Holm oak Quercus ilex L.; specific complex. Acta Botany Gallica, 148, 289-317.
16. Llamas F, Perez-Morales C, Acedo C, Penas A (1995) Foliar trichomes of the evergreen and semi-deciduous species of the genus Quercus (Fagaceae) in the Iberian Peninsula. Botanical Journal of the Linnean Society, 117, 47-57.
17. Maire R (1961) Flore de l'Afrique Du Nord 7. Lechevallier, Paris.
18. Manos PS, Doyle JJ, Nixon KC (1999) Phylogeny, biogeography, and processes of molecular differentiation in Quercus subgenus Quercus (Fagaceae). Molecular Phylogenetics and Evolution, 12, 333-349.
19. Mariac C, Trouslot P, Poteaux C, Bezançon G, Renno JF (2000) A simple method for extraction of chloroplast DNA from herbaceous and woody plants for RFLP analysis. Biotechniques, 28, 110-113.
20. Michaud H, Toumi L, Lumaret R, Li TX, Romane F, Di Giusto F (1995) Effect of geographical discontinuity on genetic variation in Quercus ilex L. (holm-oak). Evidence from enzyme polymorphism. Heredity, 74, 590-606.
21. Mindell DP, Thacker CE (1996) Rates of molecular evolution: Phylogenetic issues and applications. Annual Review of Ecology and Systematics, 27, 279-303.
22. Natividade Viera J (1936) Estudo histologico das peridermes do hibrido Quercus ilex x Quercus suber. Conteneo Publico Direcção Geral Florestas E Aquicolas, 3, 343-368.
23. Natividade Viera J (1937) Recherches cytologiques sur quelques espèces et hybrides du genre Quercus. Bolletano de la Societa Brotteriana, 12, 21-85.
24. Nei M (1987) Molecular Evolutionary Genetics. Columbia University Press, New York.
25. Petit RJ, Bialozyl R, Brewer S, Cheddadi R, Comps B (2001) From spatial patterns of genetic diversity to postglacial migration processes in forest trees. In: Integrating Ecology and Evolution in a Spatial Concept (eds Silvertown J, Antonovicks J), pp. 295-318. Blackwell Science, Oxford.
26. Petit RJ, Brewer S, Bordacs S et al. (2002b) Identification of refugia and postglacial colonisation routes of European white oaks based on chloroplast DNA and fossil pollen evidence. Forest Ecology and Management, 156, 49-71.
27. Petit RJ, Csaikl U, Bordacs S et al. (2002a) Chloroplast DNA variation in European white oaks: Phylogeography and patterns of diversity based on data from over 2600 populations. Forest Ecology and Management, 156, 5-26.
28. Pons O, Petit RJ (1995) Estimation, variance and optimal sampling of gene diversity. I. Haploid locus. Theoretical and Applied Genetics, 90, 462-470.
29. Pons A, Vernet JL (1971) Une synthèse nouvelle de l'histoire du chêne vert (Quercus ilex L.). Bulletin de la Société Botanique de France, 118, 841-850.
30. Ruperez A (1957) La Encina Y Sus Tratamentos. Editiones selvícolas, Madrid.
31. Saenz De Rivas C (1967) Estudios sobre Quercus ilex L. y Quercus rotundifolia Lamk. Anales de l'Instituto de Botanica a Journal of Cavanilles, 2, 243-262.
32. Schwarz O (1937) Monographie der Eichen Europas und des Mittelmeergebietes. I. Textband. Dahlem bei Berlin, Berlin.
33. Swofford D (1998) PAUP Phylogenetic Analysis Using Parsimony (and Other Methods) Beta, Version 4.0. Sinauer, Sunderland, MA.
34. Taberlet P, Fumagalli L, Wust-Saucy AG, Cosson JF (1998) Comparative phylogeography and postglacial colonisation routes in Europe. Molecular Ecology, 7, 453-464.
35. Toumi L, Lumaret R (1998) Allozyme variation in cork oak (Quercus suber L.): The role of phylogeography, genetic introgression by other Mediterranean oak species and human activities. Theoretical and Applied Genetics, 97, 647-656.
36. Toumi L, Lumaret R (2001) Allozyme characterisation of four Mediterranean evergreen oak species. Biochemical Systematics and Ecology, 29, 799-817.
37. Tutin TG, Heywood VH, Burges NA, Moore DM, Valentine DH, Walters SM, Webb DA (1993). Flora Europea, vol. 1. Cambridge University Press, London.