Glacial-induced altitudinal migrations in Armeria (Plumbaginaceae) inferred from patterns of chloroplast DNA haplotype sharing

Molecular Ecology

Volumn 11, Issue 10, 2002, Pages 1965-1974

  Gutierrez Larena B ^a   Fuertes Aguilar, J ^a   Nieto Feliner, G ^a  

^a CSIC   (Spain)

Author keywords

Armeria; Chloroplast DNA; Glaciations; Hybridization; Phylogeography; TrnL F

Indexed keywords

ALTITUDE; DNA, CHLOROPLAST; DNA, PLANT; HAPLOTYPES; HYBRIDIZATION, GENETIC; ICE; MOLECULAR SEQUENCE DATA; PLUMBAGINACEAE; SEQUENCE ANALYSIS, DNA; SPAIN;

ARMERIA; ARMERIA FILICAULIS; ARMERIA SPLENDENS; ARMERIA VILLOSA; EMBRYOPHYTA; PLUMBAGINACEAE; VILLOSA;

EID: 0036791686     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.2002.01594.x     Document Type: Article

References (43)

1. Abbott RJ, Smith LC, Milne RI, Crawford RMM, Wolff K, Balfour J (2000) Molecular analysis of plant migration and refugia in the Arctic. Science, 289, 1343-1346.
2. Arnold ML (1997) Natural Hybridization and Evolution. Oxford University Press, New York.
3. Avise JC (2000) Phylogeography. The History and Formation of Species. Harvard University Press, Cambridge.
4. Belahbib N, Pemonge M-H, Ouassou A et al. (2001) Frequent cytoplasmic exchanges between oak species that are not closely related: Quercus suber and Q. ilex in Morocco. Molecular Ecology, 10, 2003-2012.
5. Brochmann C, Borgen L, Stabbetorp OE (2000) Multiple diploid hybrid speciation of the Canary Island endemic Argyranthemum sundingii (Asteraceae). Plant Systematics and Evolution, 220, 77-92.
6. Castelloe J, Templeton AR (1994) Root probabilities for intraspecific gene trees under neutral coalescent theory. Molecular Phylogentics and Evolution, 3, 102-113.
7. Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology, 9, 1657-1660.
8. Comes HP, Kadereit JW (1998) The effect of Quaternary climatic changes on plant distribution and evolution. Trends in Plant Science, 3, 432-438.
9. Crandall KA, Templeton AR (1993) Empirical tests of some predictions from coalescent theory with application to intraspecific phylogeny reconstruction. Genetics, 134, 959-969.
10. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemistry Bulletin, 19, 11-15.
11. Dumolin-Lapègue S, Kremer A, Petit RJ (1999) Are chloroplast and mitochondrial DNA variation species independent in oaks? Evolution, 53, 1406-1413.
12. Ferris C, King RA, Hewitt GM (1999) Isolation within species and the history of glacial refugia. In: Molecular Systematics and Plant Evolution (eds Hollingsworth PM, Bateman RM, Gornall RJ), pp. 20-34. Taylor & Francis, London.
13. Fu YX, Li WH (1999) Coalescing into the 21st century: an overview and prospectus of coalescent theory. Theoretical and Populational Biology, 58, 1-10.
14. Fuertes Aguilar J, Rosselló JA, Nieto Feliner G (1999a) nrDNA concerted evolution in natural and artificial hybrids of Armeria (Plumbaginaceae). Molecular Ecology, 8, 1341-1346.
15. Fuertes Aguilar J, Rosselló JA, Nieto Feliner G (1999b) Molecular evidence for the compilospecies model of reticulate evolution in Armeria (Plumbaginaceae). Systematic Biology, 48, 735-754.
16. Fuertes Aguilar J, Nieto Feliner G (2002) Additive polymorphisms and reticulation in an ITS phylogeny of thrifts (Armeria, Plumbaginaceae ). Molecular Phylogenetics and Evolution, in press.
17. a Conferencia Internacional Sierra Nevada. Conservación Y Desarrollo Sostenible (eds Chacón Montero J, Rosua Campos JL), Vol. 1, pp. 233-260. Universidad de Granada, Granada.
18. Hewitt GM (1996) Some genetic consequences of ice ages, and their role in divergence and speciation. Biological Journal of the Linnean Society, 58, 247-276.
19. Hewitt GM (2001) Speciation, hybrid zones and phylogeography - or seeing genes in space and time. Molecular Ecology, 10, 537-549.
20. Hudson RR (1990) Gene genealogies and the coalescent process. Oxford Surveys in Evolutionary Biology, 7, 1-44.
21. Jackson HD, Steane DA, Potts BM, Vaillancourt RE (1999) Chloroplast DNA evidence for reticulate evolution in Eucalyptus (Myrtaceae). Molecular Ecology, 8, 739-751.
22. Matos JA, Schaal BA (2000) Chloroplast evolution in the Pinus montezumae complex: a coalescent approach to hybridization. Evolution, 54, 1218-1233.
23. McKinnon GE, Vaillancourt RE, Jackson HD, Potts BM (2001) Chloroplast sharing in the Tasmanian Eucalyptus. Evolution, 55, 703-711.
24. Neigel JE, Avise JC (1986) Phylogenetic relationships of mitochondrial DNA under various demographic models of speciation. In: Evolutionary Processes and Theory (eds Nevo E, Karlin S), pp. 515-534. Academic Press, New York.
25. Nieto Feliner G (1990) Armeria. In: Flora Iberica (eds Castroviejo S, Lainz M, López González Get al.), Vol. 2, pp. 642-721. Real Jardín Botánico, CSIC, Madrid.
26. Nieto Feliner G, Izuzquiza A, Lansac AR (1996) Natural and experimental hybridization in Armeria (Plumbaginaceae): A. villosa subsp. carratracensis. Plant Systematics and Evolution, 201, 163-177.
27. Nieto Feliner G, Rosselló JA, Fuertes Aguilar J (1998) A new subspecies of Armeria filicaulis (Plumbaginaceae) from Sierra Nevada (Southern Spain). Anales del Jardín Botánico de Madrid, 56, 162-164.
28. Nieto Feliner G, Fuertes Aguilar J, Rosselló JA (2002) Reticulation or divergence: the origin of a rare serpentine endemic assessed with chloroplast, nuclear and RAPD markers. Plant Systematics and Evolution, 231, 19-38.
29. Peinado Lorca M, Rivas-Martínez S, eds. (1987) La Vegetación de España. Universidad de Alcalá de Henares, Alcalá de Henares.
30. Petit RJ, Pineau E, Demesure B, Bacilier R, Ducousso A, Kremer A (1997) Chloroplast DNA footprints of postglacial recolonization by oaks. Proceedings of the National Academy of Sciences of the USA, 94, 9996-10001.
31. Posada D, Crandall KA (2001) Intraspecific gene genealogies: trees grafting into networks. Trends in Ecology and Evolution, 16, 37-45.
32. Posada D, Crandall KA, Templeton AR (2000) GeoDis: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Molecular Ecology, 9, 487-488.
33. Schaal BA, Olsen KM (2000) Gene genealogies and population variation in plants. Proceedings of the National Academy of Sciences of the USA, 97, 7024-7029.
34. Schaal BA, Hayworth DA, Olsen KM, Rauscher JT, Smith WA (1998) Phylogeographic studies in plants: problems and prospects. Molecular Ecology, 7, 465-474.
35. Soltis DE, Gitzendanner MA, Strenge DD, Soltis PS (1997) Chloroplast DNA intraspecific phylogeography of plants from the Pacific Northwest of North America. Plant Systematics and Evolution, 206, 353-373.
36. Taberlet P, Gielly L, Patou G, Bouvet J (1991) Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology, 17, 1105-1109.
37. Taberlet P, Fumagalli L, Wust-Saucy AG, Cosson JF (1998) Comparative phylogeography and postglacial colonization routes in Europe. Molecular Ecology, 7, 453-464.
38. Templeton AR, Sing CF (1993) A cladistic analysis of the phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses under cladogram uncertainty and recombination. Genetics, 134, 659-669.
39. Templeton AR, Boerwinkle E, Sing CF (1987) A cladistic analysis of the phenotypic associations with haplotypes inferred from restriction endonuclease mapping. I. Basic theory and an analysis of alcohol dehydrogenase activity in Drosophila. Genetics, 117, 343-351.
40. Templeton AR, Crandall KA, Sing CF (1992) A cladistic analysis of the phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics, 132, 619-633.
41. Templeton AR, Routman E, Phillips CA (1995) Separating population structure from population history: a cladistic analysis of the geographical distribution of mitochondrial DNA haplotypes in the tiger salamander, Ambystoma tigrinum. Genetics, 140, 767-782.
42. Whittemore AT, Schaal BA (1991) Interspecific gene flow in sympatric oaks. Proceedings of the National Academy of Sciences of the USA, 88, 2540-2544. 8213.
43. Wolf PG, Murray RA, Sipes SD (1997) Species-independent geographical structuring of chloroplast DNA haplotypes in a montane herb Ipomopsis (Polemoniaceae). Molecular Ecology, 6, 283-291.