Expression profiling of the whole Arabidopsis Shaggy-like kinase multigene family by real-time reverse transcriptase-polymerase chain reaction

Plant Physiology

Volumn 130, Issue 2, 2002, Pages 577-590

  Charrier, Bénédicte ^a   Champion, Anthony ^a   Henry, Yves ^a   Kreis, Martin ^a  

^a INSTITUTE OF PLANT SCIENCES PARIS SACLAY IPS2   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ENZYMES; GENES; OSMOSIS; PHOTOSYNTHESIS;

OSMOTIC CHANGES;

PLANTS (BOTANY);

ARABIDOPSIS; EMBRYOPHYTA; EUKARYOTA;

EID: 0036772151     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.009175     Document Type: Article

References (63)

1. Amador V, Monte E, Garcia-Martinez JL, Prat S (2001) Gibberellins signal nuclear import of PHOR1 a photoperiod-responsive protein with homology to Drosophila armadillo. Cell 106: 343-354
2. An YQ, McDowell JM, Huang S, McKinney EC, Chambliss S, Meagher RB (1996) Strong, constitutive expression of the Arabidopsis ACT2/ACT8 actin subclass in vegetative tissues. Plant J 10: 107-121
3. Bustin SA (2000) Absolute quantification of mRNA using real-time reverse transcription polymerase chain reaction assays. J Mol Endocrinol 25: 169-193
4. Byrne ME, Barley R, Curtis M, Arroyo JM, Dunham M, Hudson A, Martienssen RA (2000) Asymmetric Leaves 1 mediates leaf patterning and stem cell function in Arabidopsis. Nature 408: 967-971
5. Chikano H, Ogawa M, Ikeda Y, Koizumi N, Kusano T, Sano H (2001) Two novel genes encoding SNF-1 related protein kinases from Arabidopsis thaliana: differential accumulation of AtSR1 and AtSR2 transcripts in response to cytokinins and sugars and phosphorylation of sucrose synthase by AtSR2. Mol Gen Genet 264: 674-681
6. Dajani R, Fraser E, Roe SM, Young N, Good V, Dale TC, Pearl LH (2001) Crystal structure of glycogen synthase kinase 3β: structural basis for phosphate-primed substrate specificity and autoinhibition. Cell 105: 721-732
7. Dan I, Watanabe NM, Kusumi A (2001) The Ste20 group kinases as regulators of MAP kinase cascades. Trends Cell Biol 11: 220-230
8. Davletova S, Meszaros T, Miskolczi P, Oberschall A, Torok K, Magyar Z, Dudits D, Deak M (2001) Auxin and heat shock activation of a novel member of the calmodulin like domain protein kinase gene family in cultured alfalfa cells. J Exp Bot 52: 215-221
9. Di Laurenzio L, Wysocka-Diller J, Malamy JE, Pysh L, Helariutta Y, Freshour G, Hahn MG, Feldmann KA, Benfey PN (1996) The Scare-crow gene regulates an asymmetric cell division that is essential for generating the radial organization of the Arabidopsis root. Cell 86: 423-433
10. Dornelas MC, Lejeune B, Dron M, Kreis M (1998) The Arabidopsis Shaggy-related protein kinase (ASK) gene family: structure organization and evolution. Gene 212: 249-257
11. Dornelas MC, Van Lammeren AA, Kreis M (2000) Arabidopsis thaliana Shaggy-related protein kinases (AtSK11 and 12) function in perianth and gynoecium development Plant J 21: 419-429
12. Dornelas MC, Wittich P, von Recklinghausen I, van Lammeren A, Kreis M (1999) Characterization of three novel members of the Arabidopsis Shaggy-related protein kinase (ASK) multigene family. Plant Mol Biol 39: 137-147
13. Emily-Fenouil F, Ghiglione C, Lhomond G, Lepage T, Gache C (1998) GSK3beta/shaggy mediates patterning along the animal-vegetal axis of the sea urchin embryo. Development 125: 2489-2498
14. Gallagher TF, Ellis RJ (1982) Light-stimulated transcription of genes for two chloroplast polypeptides in isolated pea leaf nuclei. EMBO J 1: 1493-1498
15. Greiner O, Day PJ, Bosshard PP, Imeri F, Altwegg M, Nadal D (2001) Quantitative detection of Streptococcus pneumoniae in nasopharyngeal secretions by real-time PCR. J Clin Microbiol 39: 3129-3134
16. Grossniklaus U, Vielle-Calzada JP, Hoeppner MA, Gagliano WB (1998) Maternal control of embryogenesis by MEDEA, a Polycomb group gene in Arabidopsis. Science 280: 446-450
17. Hajouj T, Michelis R, Gepstein S (2000) Cloning and characterization of a receptor-like protein kinase gene associated with senescence. Plant Physiol 124: 1305-1314
18. He X, Saint-Jeannet JP, Woodgett JR, Varmus HE, Dawid IB (1995) Glycogen synthase kinase-3 and dorsoventral patterning in Xenopus embryos. Nature 374: 617-622
19. Heitzler P, Simpson P (1991) The choice of cell fate in the epidermis of Drosophila. Cell 64: 1083-1092
20. Hernandez M, Rio A, Esteve T, Prat S, Pla M (2001) A rapeseed-specific gene acetyl-coa carboxylase can be used as a reference for qualitative and real-time quantitative PCR detection of transgenes from mixed food samples. J Agric Food Chem 49: 3622-3627
21. Huang S, An YQ, McDowell JM, McKinney EC, Meagher RB (1997) The Arabidopsis ACT11 actin gene is strongly expressed in tissues of the emerging inflorescence pollen and developing ovules. Plant Mol Biol 33: 125-139
22. Hunter T, Plowman GD (1997) The protein kinases of budding yeast: six score and more. Trends Biochem Sci 22: 18-22
23. Ichimura K, Mizoguchi T, Irie K, Morris P, Giraudat J, Matsumoto K, Shinozaki K (1998) Isolation of ATMEKK1 (a MAP kinase kinase kinase)-interacting proteins and analysis of a MAP kinase cascade in Arabidopsis Biochem Biophys Res Commun 253: 532-543
24. Ingham DJ, Beer S, Money S, Hansen G (2001) Quantitative real-time PCR assay for determining transgene copy number in transformed plants. Biotechniques 31: 136-140
25. Iuchi S, Kobayashi M, Yamaguchi-Shinozaki K, Shinozaki K (2000) A stress-inducible gene for 9-cis-epoxycarotenoid dioxygenase involved in abscisic acid biosynthesis under water stress in drought-tolerant cowpea. Plant Physiol 123: 553-562
26. Jonak C, Beisteiner D, Beyerly J, Hirt H (2000) Wound-induced expression and activation of WIG, a novel glycogen synthase kinase 3. Plant Cell 12: 1467-1475
27. Jonak C, Heberle-Bors E, Hirt H (1995) Inflorescence-specific expression of AtK-1 a novel Arabidopsis thaliana homologue of shaggy/glycogen synthase kinase-3. Plant Mol Biol 27: 217-221
28. Jouannic S, Champion A, Segui-Simarro JM, Salimova E, Picaud A, Tregear J, Testillano P, Risueno MC, Simanis V, Kreis M et al. (2001) The protein kinases AtMAP3Kepsilon1 and BnMAP3Kepsilon1 are functional homologues of S. pombe cdc7p and may be involved in cell division. Plant J 26: 637-649
29. Kariyazono H, Ohno T, Ihara K, Igarashi H, Joh-o K, Ishikawa S, Hara T (2001) Rapid detection of the 22q11.2 deletion with quantitative real-rime PCR. Mol Cell Probe 5: 71-73
30. Kim L, Kimmel AR (2000) GSK3, a master switch regulating cell-fate specification and tumorigenesis. Curr Opin Genet Dev 10: 508-514
31. Krebbers E, Seurinck J, Herdies L, Cashmore AR, Timko MP (1988) Four genes in two diverged subfamilies encode the ribulose-1,5-bisphosphate carboxylase small subunit polypeptides of Arabidopsis thaliana. Plant Mol Biol 11: 745-759
32. Lammers PJ, Jun J, Abubaker J, Arreola R, Gopalan A, Bago B, Hernandez-Sebastia C, Allen JW, Douds DD, Pfeffer PE et al. (2001) The glyoxylate cycle in an arbuscular mycorrhizal fungus. Carbon flux and gene expression Plant Physiol 127: 1287-1298
33. Leprince A, Jouannic S, Hamal A, Kreis M, Henry Y (1999) Molecular characterization of plant cDNAs BnMAP4Kalpha1 and BnMAP4Kalpha2 belonging to the GCK/SPS1 subfamily of MAP kinase kinase kinase kinase. Biochim Biophys Acta 1444: 1-13
34. Li J, Nam KH (2002) Regulation of brassinosteroid signaling by a GSK3/Shaggy-like kinase. Science 295: 1299-1301
35. Li J, Nam KH, Vafeados D, Chory J (2001) BIN2, a new brassinosteroid-insensitive locus in Arabidopsis Plant Physiol 127: 14-22
36. Lindroth AM, Kvarnheden A, von Arnold S (2001) Isolation of a PSTAIRE CDC2 cDNA from Pinus contorta and its expression during adventitious root development. Plant Physiol Biochem 39: 107-114
37. Marcote MJ, Carbonell J (2000) Transient expression of a pea MAP kinase gene induced by gibberellic acid and 6-benzyladenine in unpollinated pea ovaries. Plant Mol Biol 44: 177-186
38. Martinek S, Inonog S, Manoukian AS, Young MW (2001) A role for the segment polarity gene shaggy/GSK-3 in the Drosophila circadian clock Cell 105: 769-779
39. Mizoguchi T, Irie K, Hirayama T, Hayashida N, Yamaguchi-Shinozaki K, Matsumoto K, Shinozaki K (1996) A gene encoding a mitogen-activated protein kinase kinase kinase is induced simultaneously with genes for a mitogen-activated protein kinase and an S6 ribosomal protein kinase by touch cold and water stress in Arabidopsis thaliana. Proc Natl Acad Sci USA 93: 765-769
40. Morelli G, Nagy F, Fraley RT, Rogers SG, Chua NH (1985) A short conserved sequence is involved in the light-inducibility of a gene encoding ribulose 1,5-bisphosphate carboxylase small subunit of pea. Nature 315: 200-204
41. Moreno J, Spreitzer RJ (1999) C172S substitution in the chloroplast-encoded large subunit affects stability and stress-induced turnover of ribulose-15-bisphosphate carboxylase/oxygenase. J Biol Chem 274: 26789-26793
42. Morris PC, Guerrier D, Leung J, Giraudat J (1997) Cloning and characterization of MEK1, an Arabidopsis gene encoding a homologue of MAP kinase kinase. Plant Mol Biol 35: 1057-1064
43. Murillo I, Jaeck E, Cordero MJ, San Segundo B (2001) Transcriptional activation of a maize calcium-dependent protein kinase gene in response to fungal elicitors and infection Plant Mol Biol 45: 145-158
44. Oreña SJ, Torchia AJ, Garofalo RS (2000) Inhibition of glycogen-synthase kinase 3 stimulates glycogen synthase and glucose transport by distinct mechanisms in 3T3-L1 adipocytes. J Biol Chem 275: 15765-15772
45. Pay A, Jonak C, Bögre L, Meskiene I, Mairinger T, Szalay A, Heberle-Bors A, Hirt E (1993) The MSK family of alfalfa protein kinase genes encodes homologues of shaggy/glycogen synthase kinase-3 and shows differential expression patterns in plant organs and development. Plant J 3: 847-856
46. Perez-Perez JM, Ponce MR, Micol JL (2002) The UCU1 Arabidopsis gene encodes a SHAGGY/GSK3-like kinase required for cell expansion along the proximodistal axis. Dev Biol 242: 161-173
47. Piao HL, Lim JH, Kim SJ, Cheong GW, Hwang I (2001) Constitutive over-expression of AtGSK1 induces NaCl stress responses in the absence of NaCl stress and results in enhanced NaCl tolerance in Arabidopsis. Plant J 27: 305-314
48. Piao HL, Pih KT, Lim JH, Kang SG, Jin JB, Kim SH, Hwang I (1999) An Arabidopsis GSK3/shaggy-like gene that complements yeast salt stress-sensitive mutants is induced by NaCl and abscisic acid Plant Physiol 119: 1527-1534
49. Raitt DC, Posas F, Saito H (2000) Yeast Cdc42 GTPase and Ste20 PAK-like kinase regulate Sho1-dependent activation of the Hog1 MAPK pathway. EMBO J 19: 4623-4631
50. Reintanz B, Szyroki A, Ivashikina N, Ache P, Godde M, Becker D, Palme K, Hedrich R (2002) AtKC1, a Silent Arabidopsis potassium channel alpha-subunit modulates root hair K+ influx. Proc Natl Acad Sci USA 99: 4079-4084
51. Ruel L, Stambolic V, Ali A, Manoukian AS, Woodgett JR (1999) Regulation of the protein kinase activity of Shaggy (Zeste-white3) by components of the wingless pathway in Drosophila cells and embryos. J Biol Chem 274: 21790-21796
52. Saitou N, Nei N (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425
53. Sakai H, Medrano LJ, Meyerowitz EM (1995) Role of SUPERMAN in maintaining Arabidopsis floral whorl boundaries. Nature 378: 199-203
54. Shin HJ, Lee DE, Shin DH, Kim KU, Kim HY, Ohashi Y, Han O, Baik MG, Back K (2001) Molecular cloning and cultivar specific expression of MAP kinases from Capsicum annuum. Mol Cell 11: 48-54
55. Siegfried E, Chou TB, Perrimon N (1992) wingless signaling acts through zeste-white 3 the Drosophila homolog of glycogen synthase kinase-3 to regulate engrailed and establish cell fate. Cell 71: 1167-1179
56. Sivakumar P, Sharmila P, Saradhi PP (2000) Proline alleviates salt-stress-induced enhancement in ribulose-15-bisphosphate oxygenase activity. Biochem Biophys Res Commun 279: 512-515
57. Tavares R, Aubourg S, Lecharny A, Kreis M (2000) Organization and structural evolution of four multigene families in Arabidopsis thaliana: AtLCAD AtLGT AtMYST and AtHD-GL2. Plant Mol Biol 42: 703-717
58. Tichtinsky G, Tavares R, Takvorian A, Schwebel-Dugue N, Twell D, Kreis M (1998) An evolutionary conserved group of plant GSK-3/shaggy-like protein kinase genes preferentially expressed in developing pollen. Biochim Biophys Acta 1442: 261-273
59. Wang QM, Fiol CJ, Depaoli-Roach AA, Roach PJ (1994) Glycogen synthase kinase-3beta is a dual specificity kinase differentially regulated by tyrosine and serine/threonine phosphorylation. J Biol Chem 269: 14566-14574
60. Webster MT, Rozycka M, Sara E, Davis E, Smalley M, Young N, Dale TC, Wooster R (2001) Sequence variants of the axin gene in breast, colon and other cancers: an analysis of mutations that interfere with GSK3 binding. Gene Chrom Can 28: 443-453
61. Yamaguchi-Shinozaki K, Shinozaki K (1993) Characterization of the expression of a desiccation-responsive rd29 gene of Arabidopsis thaliana and analysis of its promoter in transgenic plants. Mol Gen Genet 236: 331-340
62. Yokoyama R, Nishitani K (2001) A comprehensive expression analysis of all the members of a gene family encoding cell-wall enzymes allowed us to predict cis-regulatory regions involved in cell-wall construction in specific organs of Arabidopsis. Plant Cell Physiol 42: 1025-1033
63. Zumbrunn J, Kinoshita K, Hyman AA, Näthke IS (2001) Binding of the adenomatous polyposis coli protein to microtubules increases microtubule stability and is regulated by GSK3 beta phosphorylation. Curr Biol 11: 44-49