Transcription of matR gene in Rhizobium leguminosarum bv. trifolii

Journal of Biochemistry, Molecular Biology and Biophysics

Volumn 6, Issue 4, 2002, Pages 283-288

  Lee, Hwan Young ^a   Kim, Yu Sam ^a  

^a Yonsei University   (South Korea)

Author keywords

Downstream; Malonate; MatR; Rhizobium leguminosarum bv. trifolii; Transcriptional regulator

Indexed keywords

MALONIC ACID; RNA;

ARTICLE; CODING; GENE EXPRESSION; GENE REPRESSION; GENETIC TRANSCRIPTION; METABOLISM; NONHUMAN; OPERON; PROMOTER REGION; PROTEIN BINDING; RECEPTOR UPREGULATION; RHIZOBIUM LEGUMINOSARUM; RHIZOBIUM TRIFOLII; TRANSCRIPTION REGULATION;

BACTERIAL PROTEINS; BASE SEQUENCE; BINDING SITES; DEOXYRIBONUCLEASE I; DOSE-RESPONSE RELATIONSHIP, DRUG; GENE EXPRESSION REGULATION, ENZYMOLOGIC; MALONATES; MOLECULAR SEQUENCE DATA; MUTAGENESIS; OPERON; PLASMIDS; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; RHIZOBIUM LEGUMINOSARUM; RNA; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

RHIZOBIUM; RHIZOBIUM LEGUMINOSARUM; RHIZOBIUM LEGUMINOSARUM BV. TRIFOLII;

EID: 0036697639     PISSN: 10258140     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (15)

1. An, J.H. and Kim, Y.S. (1998) "A novel gene cluster encoding malonyl-CoA decarboxylase (MatA), malonyl-CoA synthetase (MatB) and a putative dicarboxylate carrier protein (MatC) in Rhizobium trifolii: cloning, sequencing, and expression of the enzymes in Escherichia coli", Eur. J. Biochem. 257, 395-402.
2. Lee, H.Y., An, J.H. and Kim, Y.S. (2000) "Identification and characterization of a novel transcriptional regulator, MatR, for malonate metabolism in Rhizobium leguminosarum bv. trifolii", Eur. J. Biochem. 267, 7224-7229.
3. Fujita, Y., Fujita, T., Miwa, Y., Nihashi, J. and Aratani, Y. (1986) "Organization and transcription of the gluconate operon, gnt, of Bacillus subtilis", J. Biol. Chem. 261, 13744-13753.
4. Fujita, Y. and Miwa, Y. (1989) "Identification of an operator sequence for the Bacillus subtilis gnt operon", J. Biol. Chem. 264, 4201-4206.
5. Miwa, Y., Nagura, K., Eguchi, S., Fukuda, H., Deutscher, J. and Fujita, Y. (1997) "Catabolite repression of the Bacillus subtilis gnt operon exerted by two catabolite-responsive elements", Mol. Microbiol. 23, 1203-1213.
6. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Ed. (Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY).
7. Kwon, H.-S., Kim, M.-S., Edenberg, J.H. and Hur, M.-W. (199) "Sp3 and Sp4 can repress transcription by competing with Sp1 for the Core cis-elements on the Human ADH5/FDH minimal promoter", J. Biol. Chem. 274, 20-28.
8. Kim, Y.S. and Bang, S.K. (1988) "Assays for malonyl-Coenzyme A synthetase", Anal. Biochem. 170, 45-49.
9. Lisser, S. and Margalit, H. (1993) "Compilation of E. coli mRNA promoter sequences", Nucleic Acids Res. 21, 1507-1516.
10. Harley, C.B. and Reynolds, R.P. (1997) "Analysis of E. coli promoter sequences", Nucleic Acids Res. 15, 2343-2361.
11. Munson, G.P. and Scott, J.R. (2000) "Rns, a virulence regulator within the AraC family, requires binding sites upstream and downstream of its own promoter to function as an activator", Mol. Microbiol. 36, 1391-1402.
12. Szalewska-Palasz, A., Wegrzyn, A., Blaszczak, A., Taylor, K. and Wegrzyn, G. (1998) "DnaA-stimulated transcriptional activation of orilambda: Escherichia coli RNA polymerase beta subunit as a transcriptional activator contact site", Proc. Natl Acad. Sci. USA 95, 4241-4246.
13. Ellinger, T., Behnke, D., Bujard, H. and Gralla, J.D. (1994) "Stalling of Escherichia coli RNA polymerase in the +6 to +12 region in vivo is associated with tight binding to consensus promoter elements", J. Mol. Biol. 239, 455-465.
14. Liu, W., Qi, Y. and Hulett, F.M. (1998) "Sites internal to the coding regions of phoA and pstS bind PhoP and are required for full promoter activity", Mol. Microbiol. 28, 119-130.
15. Koo, J.H., Cho, I.H. and Kim, Y.S. (2000) "The malonate decarboxylase operon of Acinetobacter calcoacetricus KCCM 40902 is regulated by malonate and the transcriptional repressor MdcY", J. Bacteriol. 182, 6382-6390.