Determination of surface-bound-fluorophore orientation by goniometric fluorescence polarization: Application to quantification of DNA–chip readouts

Applied Optics

Volumn 41, Issue 22, 2002, Pages 4732-4738

  Barritault, Pierre ^a,b   Gétin, Stéphane ^a,b   Chaton, Patrick ^a,b   Vinet, Françoise ^a,c   Fouque, Brigitte ^a,d  

^a CEA GRENOBLE   (France)

^b Département d Optronique   (France)

^c Département Systèmes pour l Information et la Sante   (France)

^d Bio Energétique Cellulaire et Pathologique   (France)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DYES; FLUORESCENCE; GONIOMETERS; LIGHT POLARIZATION; READOUT SYSTEMS; SILICON WAFERS;

SURFACE-BOUND FLUOROPHORES;

FLUOROMETERS;

FLUORESCENT DYE;

ARTICLE; COMPUTER SIMULATION; DNA MICROARRAY; FLUORESCENCE POLARIZATION; HUMAN; THEORETICAL MODEL;

COMPUTER SIMULATION; FLUORESCENCE POLARIZATION; FLUORESCENT DYES; HUMANS; MODELS, THEORETICAL; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS;

EID: 0036667320     PISSN: 1559128X     EISSN: 21553165     Source Type: Journal    
DOI: 10.1364/AO.41.004732     Document Type: Article

References (12)

1. E. H. Hellen and D. Axelrod, “Fluorescence emission at dielectric and metal-film interfaces,” J. Opt. Soc. Am. B 4, 337-350 (1987).
2. R. R. Chance, A. Prock, and R. Silbey, “Molecular fluorescence and energy transfer near interfaces,” Adv. Chem. Phys. 37, 1-65 (1978).
3. W. Lukosz, “Light emission by magnetic and electric dipoles close to a plane dielectric interface. III. Radiation patterns of dipoles with arbitrary orientation,” J. Opt. Soc. Am. 69, 1495-1503 (1979).
4. J. Enderlein, T. Ruckstuhl, and S. Seeger, “Highly efficient optical detection of surface-generated fluorescence,” Appl. Opt. 38, 724-732 (1999).
5. P. L. Edminston, J. E. Lee, L. L. Wood, and S. S. Saavedra, “Dipole orientation distributions in Langmuir-Blodgett films by planar waveguide linear dichroism and fluorescence anisotropy,” J. Phys. Chem. 100, 775-784 (1996).
6. A. Lambacher and P. Fromherz, “Orientation of hemicyanine dye in lipid membrane measured by fluorescence interferometry on a silicon chip,” J. Phys. Chem. B 105, 343-346 (2001).
7. M. Lieberherr, C. Fatinger, and W. Lukosz, “Optical environment dependent effects on the fluorescence of submonomolecular dye layers on interfaces,” Surf. Sci. 189/190, 954-959 (1987).
8. S. Garoff, R. B. Stephens, C. D. Hanson, and G. K. Sorenson, “Surface interactions of adsorbed molecules as probed by their optical properties,” Opt. Commun. 41, 257-262 (1982).
9. N. Thomson, H. McConnell, and T. Burghardt, “Order in supported phospholipid monolayers detected by the dichroism of fluorescence excited with polarized evanescent illumination,” Biophys. J. 46, 739-747 (1984).
10. A. G. T. Ruiter, J. A. Veerman, M. F. Garcia-Parajo, and N. F. van Hulst, “Single molecule rotational and translational diffusion observed by near-field scanning optical microscopy,” J. Phys. Chem. A 101, 7318-7323 (1997).
11. T. Ha, T. A. Laurence, D. S. Chemla, and S. Weiss, “Polarization spectroscopy of single fluorescent molecules,” J. Phys. Chem. B 103, 6839-6850 (1999).
12. J. R. Lakowicz, Principles of Fluorescence Spectroscopy (Kluwer Academic/Plenum, New York, 1999).