Differential gene expression during seed germination in barley (Hordeum vulgare L.)

Functional and Integrative Genomics

Volumn 2, Issue 1-2, 2002, Pages 28-39

  Potokina, E ^a   Sreenivasulu, N ^a   Altschmied, L ^a   Michalek, W ^a,b   Graner, A ^a  

^a LEIBNIZ INSTITUTE OF PLANT GENETICS AND CROP PLANT RESEARCH IPK   (Germany)

^b PLANTA GmbH   (Germany)

Author keywords

Embryo; Endosperm; Functional genomics; Scutellum

Indexed keywords

AMINO ACID; CARBOHYDRATE; COMPLEMENTARY DNA; VEGETABLE PROTEIN; MESSENGER RNA;

AMINO ACID METABOLISM; ARTICLE; BARLEY; CARBOHYDRATE METABOLISM; CELL DIVISION; CONTROLLED STUDY; DNA MICROARRAY; ENDOSPERM; FUNCTIONAL GENOMICS; GENE EXPRESSION; GENETIC ANALYSIS; GERMINATION; NONHUMAN; NUCLEOTIDE METABOLISM; PLANT GENETICS; PRIORITY JOURNAL; RNA TRANSLATION; EXPRESSED SEQUENCE TAG; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; PHYSIOLOGY; PLANT SEED; PRENATAL DEVELOPMENT;

HORDEUM VULGARE; HORDEUM VULGARE SUBSP. VULGARE;

EXPRESSED SEQUENCE TAGS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, PLANT; GERMINATION; HORDEUM; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; RNA, MESSENGER; SEEDS;

EID: 0036579611     PISSN: 1438793X     EISSN: 14387948     Source Type: Journal    
DOI: 10.1007/s10142-002-0050-x     Document Type: Article

References (21)

1. 2 scavenging in plants. In: Scandalios JG (ed) Oxidative stress and the molecular biology of antioxidant defenses. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N. Y.
2. Bethke PC, Jones RL (2001) Cell death of barley aleurone protoplasts is mediated by reactive oxygen species. Plant J 25:19-29
3. Bewley JD (1997) Seed germination and dormancy. Plant Cell 9:1055-1066
4. Bewley JD, Black M (1994) Seeds. Physiology of development and germination. Plenum Press, New York
5. Briggs DL (1992) Barley germination: biochemical changes and hormonal control. In: Shewry PR (ed) Barley: genetics, biochemistry, molecular biology and biotechnology. CAB International, Wallingford
6. Eisen MB, Spellman PT, Brown PO, Botstein D (1998) Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA 95:14863-14868
7. Path A, Bethke PC, Jones RL (2001) Enzymes that scavenge reactive oxygen species are down-regulated prior to gibberellic acid-induced programmed cell death in barley aleurone. Plant Physiol 126:156-166
8. Girke T, Todd J, Ruuska S, White J, Benning C, Ohlrogge J (2000) Microarray analysis of developing Arabidopsis seeds. Plant Physiol 124:1570-1581
9. Harada JJ, Baden CS, Comai E (1988) Spatially regulated genes expressed during seed germination and postgerminative development are activated during embryogeny. Mol Gen Genet 212:466-473
10. Hayes PM, Jones BE (2000) Malting quality from a QTL perspective. In: Eighth International Barley Genetics Symposium, Adelaide Convention Centre, Adelaide, South Australia, pp 99-105
11. Igartua E, Edney M, Rossnagel BG, Spaner D, Legge WG, Scoles GJ, Eckstein PE, Penner GA, Tinker NA, Briggs KG, Falk DE, Mather DE (2000) Marker-based selection of QTL affecting grain and malt quality in two-row barley. Crop Sci 40:1426-1433
12. Jabs T (1999) Reactive oxygen intermediates as mediators of programmed cell death in plants and animals. Biochem Pharmacol 57:231-245
13. Lane BG (1991) Cellular desiccation and hydration: developmentally regulated proteins, and the maturation and germination of seed embryos. FASEB J 8:294-301
14. Michalek W, Weschke W, Pleissner KP, Graner A (2002) EST analysis in barley defines a unique set comprising 4000 genes. Theor Appl Genet 104:97-103
15. Ranki H, Sopanen T, Mikola I (1983) Secretion of carboxypeptidase-I by the scutellum of germinating barley grain. Plant Physiol 81:901-906
16. Scadsen RW, Schulze-Eefert P, Herbst JM (1995) Molecular cloning, characterization and expression analysis of two catalase isozyme genes in barley. Plant Mol Biol 29:1005-1014
17. Shutov AD, Vaintraub IA (1987) Degradation of storage proteins in germinating seeds. Phytochemistry 26:1557-1566
18. Sreenivasulu N, Altschmied E, Panitz R, Hännel U, Michalek W, Weschke W, Wobus U (2002) Identification of genes specifically expressed in maternal and filial tissues of barley caryopsis: a cDNA array analysis. Mol Genet Genom 266:758-767
19. Thomas TL (1993) Gene expression during plant embryogenesis and germination: an overview. Plant Cell 5:1401-1410
20. Wang M, Oppedijik BJ, Caspers MPM, Lamers GEM, Boot MJ, Geerlings DNG, Bakhuizen B, Meijer AH, Duijn B (1998) Spatial and temporal regulation of DNA fragmentation in the aleurone of germinating barley. J Exp Bot 49:1293-1301
21. White JA, Todd J, Newman T, Girke T, Focks N, Ilarduya MO, Jaworski JG, Ohlrogge J, Benning C (2000) A new set of Arabidopsis ESTs from developing seeds: the metabolic pathway from carbohydrates to seed oil. Plant Physiol 124:1582-1594