메뉴 건너뛰기




Volumn 299, Issue 2, 2002, Pages 229-232

Putative homeodomain proteins identified in prokaryotes based on pattern and sequence similarity

Author keywords

DNA binding domain; Eukaryote; Homeobox; Homeodomain; Pro homeodomain; Prokaryote; Sequence pattern; Transcription factors

Indexed keywords

DNA; HOMEODOMAIN PROTEIN; TRANSCRIPTION FACTOR;

EID: 0036434106     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-291X(02)02607-4     Document Type: Article
Times cited : (5)

References (20)
  • 1
    • 0030417483 scopus 로고    scopus 로고
    • Homeodomain-type DNA recognition
    • M. Billeter, Homeodomain-type DNA recognition, Prog. Biophys. Mol. Biol. 66 (1996) 211-225
    • (1996) Prog. Biophys. Mol. Biol , vol.66 , pp. 211-225
    • Billeter, M.1
  • 3
    • 0024407460 scopus 로고    scopus 로고
    • The structure of the Antennapedia homeodomain determined by NMR spectroscopy in solution: Comparison with prokaryotic repressors
    • Y.Q. Qian, M. Billeter, G. Otting, M. Muller, W.J. Gearing, K. Wuthrich, The structure of the Antennapedia homeodomain determined by NMR spectroscopy in solution: Comparison with prokaryotic repressors, Cell 59 (1999) 573-580
    • (1999) Cell , vol.59 , pp. 573-580
    • Qian, Y.Q.1    Billeter, M.2    Otting, G.3    Muller, M.4    Gearing, W.J.5    Wuthrich, K.6
  • 5
    • 0026030641 scopus 로고
    • Database of homology-derived structures and the structural meaning of sequence alignment
    • C. Sander, R. Schneider, Database of homology-derived structures and the structural meaning of sequence alignment, Proteins 9 (1991) 56-68
    • (1991) Proteins , vol.9 , pp. 56-68
    • Sander, C.1    Schneider, R.2
  • 7
    • 0029160486 scopus 로고
    • High-resolution crystal structure of a paired class operative Homeodomain dimer on DNA
    • D.S. Wilson, B. Guenther, C. Desplan, J. Kuriyan, High-resolution crystal structure of a paired class operative Homeodomain dimer on DNA, Cell 82 (1995) 709-719
    • (1995) Cell , vol.82 , pp. 709-719
    • Wilson, D.S.1    Guenther, B.2    Desplan, C.3    Kuriyan, J.4
  • 8
    • 0025310356 scopus 로고
    • DNA recognition by proteins with the helix-turn-helix motif
    • S.C Harrison, A.K. Agarwal, DNA recognition by proteins with the helix-turn-helix motif, Annu. Rev. Biochem. 59 (1990) 933-969
    • (1990) Annu. Rev. Biochem , vol.59 , pp. 933-969
    • Harrison, S.C.1    Agarwal, A.K.2
  • 9
    • 0035420653 scopus 로고    scopus 로고
    • Molecular evolution of the homeodomain family of transcription factors
    • S. Banerjee-Basu, A.D. Baxevanis, Molecular evolution of the homeodomain family of transcription factors, Nucleic Acids Res. 29 (2001) 3258-3269
    • (2001) Nucleic Acids Res , vol.29 , pp. 3258-3269
    • Banerjee-Basu, S.1    Baxevanis, A.D.2
  • 10
    • 0034712840 scopus 로고    scopus 로고
    • Analysis of a complete homeobox gene repertoire: Implications for the evolution of diversity
    • C. Kappen, Analysis of a complete homeobox gene repertoire: Implications for the evolution of diversity, Proc. Natl. Acad. Sci. USA 97 (2000) 4481-4486
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 4481-4486
    • Kappen, C.1
  • 12
    • 0023989064 scopus 로고    scopus 로고
    • Improved tools for biological sequence analysis
    • W.R. Pearson, D.J. Lipman, Improved tools for biological sequence analysis, Proc. Natl. Acad. Sci. USA 85 (1998) 2444-2448
    • (1998) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 2444-2448
    • Pearson, W.R.1    Lipman, D.J.2
  • 13
    • 0027968068 scopus 로고
    • CLUSTALW improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice
    • J.D. Thompson, D.G. Higgins, T.J. Gibson, CLUSTALW improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice, Nucleic Acids Res. 22 (1994) 4673-4680
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 15
    • 0028300741 scopus 로고
    • Combining evolutionary information and neural network to predict protein secondary structure
    • B. Rost, C. Sander, Combining evolutionary information and neural network to predict protein secondary structure, Proteins 19 (1994) 55-72
    • (1994) Proteins , vol.19 , pp. 55-72
    • Rost, B.1    Sander, C.2
  • 16
    • 0033957834 scopus 로고    scopus 로고
    • The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000
    • A. Bairoch, R. Apweiler, The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000, Nucleic Acids Res. 28 (2000) 45-48
    • (2000) Nucleic Acids Res , vol.28 , pp. 45-48
    • Bairoch, A.1    Apweiler, R.2
  • 17
    • 0033990063 scopus 로고    scopus 로고
    • GCG: The Wisconsin package of sequence analysis programs
    • D.D. Womble, GCG: The Wisconsin package of sequence analysis programs, Methods Mol. Biol. 132 (2000) 3-22
    • (2000) Methods Mol. Biol , vol.132 , pp. 3-22
    • Womble, D.D.1
  • 18
    • 0025188837 scopus 로고
    • Crystal structure of an engrailed homeodomain-DNA complex at 2.8 Å resolution: A framework for understanding homeodomain-DNA interactions
    • C.R. Kissinger, Crystal structure of an engrailed homeodomain-DNA complex at 2.8 Å resolution: A framework for understanding homeodomain-DNA interactions, Cell 63 (1990) 579-590
    • (1990) Cell , vol.63 , pp. 579-590
    • Kissinger, C.R.1
  • 19
    • 0028810470 scopus 로고
    • Specificity of minor-groove and major-groove interactions in a homeodomain-DNA complex
    • S.E. Ades, R.T. Saur, Specificity of minor-groove and major-groove interactions in a homeodomain-DNA complex, Biochemistry 34 (1995) 14601-14608
    • (1995) Biochemistry , vol.34 , pp. 14601-14608
    • Ades, S.E.1    Saur, R.T.2
  • 20
    • 0031127044 scopus 로고    scopus 로고
    • Hox genes in evolution: Protein surfaces and paralog groups
    • M. Sharkey, Y. Graba, M.P. Scott, Hox genes in evolution: Protein surfaces and paralog groups, Trends Genet. 13 (1997) 145-151
    • (1997) Trends Genet , vol.13 , pp. 145-151
    • Sharkey, M.1    Graba, Y.2    Scott, M.P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.