메뉴 건너뛰기




Volumn 33, Issue 1, 2002, Pages 39-58

Genetic structure of indigenous non-nodulating and nodulating populations of Bradyrhizobium in soils from Thailand

Author keywords

16S rDNA; Bradyrhizobium; Non nodulating; Soil bacteria; Soil populations; Soybean

Indexed keywords

PRIMER DNA; RIBOSOME RNA; RNA 16S;

EID: 0036403756     PISSN: 03345114     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (27)

References (38)
  • 2
    • 0034130242 scopus 로고    scopus 로고
    • Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources
    • Dombek, P.E., Johnson, L.K., Zimmerley, S.T., and Sadowsky, M.J. 2000. Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources. Applied and Environmental Microbiology 66: 2572-2577.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 2572-2577
    • Dombek, P.E.1    Johnson, L.K.2    Zimmerley, S.T.3    Sadowsky, M.J.4
  • 3
    • 38248998532 scopus 로고
    • Direct isolation of Bradyrhizobium japonicum from soil
    • Gault, R.R. and Schwinghamer, E.A. 1993. Direct isolation of Bradyrhizobium japonicum from soil. Soil Biology and Biochemistry 25: 1161-1166.
    • (1993) Soil Biology and Biochemistry , vol.25 , pp. 1161-1166
    • Gault, R.R.1    Schwinghamer, E.A.2
  • 4
    • 0025955548 scopus 로고
    • Genotypic diversity of an indigenous Rhizobium meliloti field population assessed by plasmid profiles, DNA fingerprinting and insertion sequence typing
    • Hartmann, A. and Amarger, N. 1991. Genotypic diversity of an indigenous Rhizobium meliloti field population assessed by plasmid profiles, DNA fingerprinting and insertion sequence typing. Canadian Journal of Microbiology 37: 600-608.
    • (1991) Canadian Journal of Microbiology , vol.37 , pp. 600-608
    • Hartmann, A.1    Amarger, N.2
  • 5
    • 0019521343 scopus 로고
    • Recombinant plasmids carrying nitrogen fixing genes from Rhizobium japonicum
    • Hennecke, H. 1981. Recombinant plasmids carrying nitrogen fixing genes from Rhizobium japonicum. Nature 291: 354-355.
    • (1981) Nature , vol.291 , pp. 354-355
    • Hennecke, H.1
  • 6
    • 0011099633 scopus 로고
    • Genus II, Rhizobium
    • R.E. Buchanan and N.E. Gibbons, eds. The Williams & Wilkins Co., Baltimore
    • Jordan, D.C. and Allen, O.N. 1974. Genus II, Rhizobium. In: Bergey's Manual of Determinative Bacteriology, 8th ed. R.E. Buchanan and N.E. Gibbons, eds. The Williams & Wilkins Co., Baltimore, pp. 262-264.
    • (1974) Bergey's Manual of Determinative Bacteriology, 8th Ed. , pp. 262-264
    • Jordan, D.C.1    Allen, O.N.2
  • 7
    • 0027318818 scopus 로고
    • The use of repetitive sequences and the polymerase chain reaction technique to classify genetically related Bradyrhizobium japonicum serocluster 123 strains
    • Judd, A.K., Schneider, M., de Bruijn, F.J., and Sadowsky, M.J. 1993. The use of repetitive sequences and the polymerase chain reaction technique to classify genetically related Bradyrhizobium japonicum serocluster 123 strains. Applied and Environmental Microbiology 59: 1702-1708.
    • (1993) Applied and Environmental Microbiology , vol.59 , pp. 1702-1708
    • Judd, A.K.1    Schneider, M.2    De Bruijn, F.J.3    Sadowsky, M.J.4
  • 8
    • 0029475680 scopus 로고
    • Soil microbial diversity and the sustainability of agricultural soils
    • Kennedy, A.C. and Smith, K.L. 1995. Soil microbial diversity and the sustainability of agricultural soils. Plant and Soil 170: 75-86.
    • (1995) Plant and Soil , vol.170 , pp. 75-86
    • Kennedy, A.C.1    Smith, K.L.2
  • 9
    • 0001419256 scopus 로고
    • Release of Rhizobium spp. from tropical soils and recovery for immunofluorescence enumeration
    • Kingsley, M.T. and Bohlool, B.B. 1981. Release of Rhizobium spp. from tropical soils and recovery for immunofluorescence enumeration. Applied and Environmental Microbiology 42: 241-248.
    • (1981) Applied and Environmental Microbiology , vol.42 , pp. 241-248
    • Kingsley, M.T.1    Bohlool, B.B.2
  • 10
    • 0031707698 scopus 로고    scopus 로고
    • Molecular diversity of rhizobia occurring on native shrubby legumes in southeastern Australia
    • Lafay, B. and Burdon, J.J. 1998. Molecular diversity of rhizobia occurring on native shrubby legumes in southeastern Australia. Applied and Environmental Microbiology 64: 3989-3997.
    • (1998) Applied and Environmental Microbiology , vol.64 , pp. 3989-3997
    • Lafay, B.1    Burdon, J.J.2
  • 11
    • 0027742175 scopus 로고
    • Isolation from soil of symbiotic and nonsymbiotic Rhizobium leguminosarum by DNA hybridization
    • Laguerre, G., Bardin, M., and Amarger, N. 1993. Isolation from soil of symbiotic and nonsymbiotic Rhizobium leguminosarum by DNA hybridization. Canadian Journal of Microbiology 39: 1142-1149.
    • (1993) Canadian Journal of Microbiology , vol.39 , pp. 1142-1149
    • Laguerre, G.1    Bardin, M.2    Amarger, N.3
  • 12
    • 0030734656 scopus 로고    scopus 로고
    • Genetic diversity of rhizobial symbionts isolated from legume species within the genera Astragalus, Oxytropis, and Onobrychis
    • Laguerre, G., van Berkum, P., Amarger, N., and Prevost, D. 1997. Genetic diversity of rhizobial symbionts isolated from legume species within the genera Astragalus, Oxytropis, and Onobrychis. Applied and Environmental Microbiology 63: 4748-4758.
    • (1997) Applied and Environmental Microbiology , vol.63 , pp. 4748-4758
    • Laguerre, G.1    Van Berkum, P.2    Amarger, N.3    Prevost, D.4
  • 13
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • E. Stackebrandt and M. Goodfellow, eds. John Wiley & Sons, New York
    • Lane, D.J. 1991. 16S/23S rRNA sequencing. In: Nucleic Acid Techniques in Bacterial Systematics. E. Stackebrandt and M. Goodfellow, eds. John Wiley & Sons, New York. pp. 115-175.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 15
    • 0030904848 scopus 로고    scopus 로고
    • Evaluation of the resolving power of three different DNA fingerprint methods to discriminate among isolates of a natural Rhizobium meliloti population
    • Niemann, S., Puhler, A., Tichy, H.V., Simon, R., and Selbitschka, W. 1997. Evaluation of the resolving power of three different DNA fingerprint methods to discriminate among isolates of a natural Rhizobium meliloti population. Applied and Environmental Microbiology 82: 477-484.
    • (1997) Applied and Environmental Microbiology , vol.82 , pp. 477-484
    • Niemann, S.1    Puhler, A.2    Tichy, H.V.3    Simon, R.4    Selbitschka, W.5
  • 16
    • 0034121618 scopus 로고    scopus 로고
    • Higher diversity of Rhizobium leguminosarum biovar viciae populations in arable soils than in grass soils
    • Palmer, K.M. and Young, J.P.W. 2000. Higher diversity of Rhizobium leguminosarum biovar viciae populations in arable soils than in grass soils. Applied and Environmental Microbiology 66: 2445-2450.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 2445-2450
    • Palmer, K.M.1    Young, J.P.W.2
  • 17
    • 0028002041 scopus 로고
    • Symbiotic plasmid transfer in Rhizobium leguminosarum biovar trifolii and competition between the inoculant strain ICMP2163 and transconjugant soil bacteria
    • Rao, J.R., Fenton, M., and Jarvis, B.D.W. 1994. Symbiotic plasmid transfer in Rhizobium leguminosarum biovar trifolii and competition between the inoculant strain ICMP2163 and transconjugant soil bacteria. Soil Biology and Biochemistry 26: 339-351.
    • (1994) Soil Biology and Biochemistry , vol.26 , pp. 339-351
    • Rao, J.R.1    Fenton, M.2    Jarvis, B.D.W.3
  • 19
    • 0011065234 scopus 로고
    • DNA fingerprinting and restriction fragment length polymorphism analysis
    • Microbiological and Biochemical Properties. R.W. Weaver, J.S. Angle, and P.S. Bottomley, eds. Soil Science Society of America, Madison, WI
    • Sadowsky, M.J. 1994. DNA fingerprinting and restriction fragment length polymorphism analysis. In: Methods of Soil Analysis, Part 2. Microbiological and Biochemical Properties. R.W. Weaver, J.S. Angle, and P.S. Bottomley, eds. Soil Science Society of America, Madison, WI, pp. 647-663.
    • (1994) Methods of Soil Analysis , Issue.PART 2 , pp. 647-663
    • Sadowsky, M.J.1
  • 20
    • 0001697668 scopus 로고
    • Genetic diversity in Bradyrhizobium japonicum serogroup 123 and its relation to genotype-specific nodulation of soybeans
    • Sadowsky, M.J., Tully, R.E., Cregan, P.B., and Keyser, H.H. 1987. Genetic diversity in Bradyrhizobium japonicum serogroup 123 and its relation to genotype-specific nodulation of soybeans. Applied and Environmental Microbiology 53: 2624-2630.
    • (1987) Applied and Environmental Microbiology , vol.53 , pp. 2624-2630
    • Sadowsky, M.J.1    Tully, R.E.2    Cregan, P.B.3    Keyser, H.H.4
  • 22
    • 0032032181 scopus 로고    scopus 로고
    • Slow-growing and oligotrophic soil bacteria phylogenetically close to Bradyrhizobium japonicum
    • Saito, A., Mitsui, H., Hattori, R., Minamisawa, K., and Hattori, T. 1998. Slow-growing and oligotrophic soil bacteria phylogenetically close to Bradyrhizobium japonicum. FEMS Microbiology. Ecology 25: 277-286.
    • (1998) FEMS Microbiology. Ecology , vol.25 , pp. 277-286
    • Saito, A.1    Mitsui, H.2    Hattori, R.3    Minamisawa, K.4    Hattori, T.5
  • 25
    • 0001721530 scopus 로고
    • Isolation from soil of Rhizobium leguminosarum lacking symbiotic information
    • Soberon-Chavez, G. and Najera, R. 1989. Isolation from soil of Rhizobium leguminosarum lacking symbiotic information. Canadian Journal of Microbiology 35: 464-468.
    • (1989) Canadian Journal of Microbiology , vol.35 , pp. 464-468
    • Soberon-Chavez, G.1    Najera, R.2
  • 28
    • 0029742228 scopus 로고    scopus 로고
    • Four unnamed species of nonsymbiotic rhizobia isolated from the rhizosphere of Lotus corniculatus
    • Sullivan, J.T., Eardly, B.D., van Berkum, P., and Ronson, C.W. 1996. Four unnamed species of nonsymbiotic rhizobia isolated from the rhizosphere of Lotus corniculatus. Applied and Environmental Microbiology 62: 2818-2825.
    • (1996) Applied and Environmental Microbiology , vol.62 , pp. 2818-2825
    • Sullivan, J.T.1    Eardly, B.D.2    Van Berkum, P.3    Ronson, C.W.4
  • 29
    • 0032574728 scopus 로고    scopus 로고
    • Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene
    • Sullivan, J.T. and Ronson, C.W. 1998. Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. Proceedings of the National Academy of Sciences (USA) 95: 5145-5149.
    • (1998) Proceedings of the National Academy of Sciences (USA) , vol.95 , pp. 5145-5149
    • Sullivan, J.T.1    Ronson, C.W.2
  • 30
    • 0035016978 scopus 로고    scopus 로고
    • The bio operon on the acquired symbiosis island of Mesorhizobium sp. strain R7A includes a novel gene involved in pimeloyl-CoA synthesis
    • Sullivan, J.T., Brown, S.D., Yocum, R.R., and Ronson, C.W. 2001. The bio operon on the acquired symbiosis island of Mesorhizobium sp. strain R7A includes a novel gene involved in pimeloyl-CoA synthesis. Microbiology 147: 1315-1322.
    • (2001) Microbiology , vol.147 , pp. 1315-1322
    • Sullivan, J.T.1    Brown, S.D.2    Yocum, R.R.3    Ronson, C.W.4
  • 31
    • 0029138948 scopus 로고
    • Analysis of genetic structure in soil populations of Rhizobium leguminosarum recovered from the USA and the UK
    • Strain, S.R., Whittam, T.S., and Bottomley, P.J. 1995. Analysis of genetic structure in soil populations of Rhizobium leguminosarum recovered from the USA and the UK. Molecular Ecology 4: 105-114.
    • (1995) Molecular Ecology , vol.4 , pp. 105-114
    • Strain, S.R.1    Whittam, T.S.2    Bottomley, P.J.3
  • 32
    • 0026270727 scopus 로고
    • Native root-nodule bacteria of traditional soybean-growing areas of northern Thailand
    • Thompson, J.A., Bhromsiri, A., Shutsrirung, A., and Lillakan, S. 1991. Native root-nodule bacteria of traditional soybean-growing areas of northern Thailand. Plant and Soil 135: 53-65.
    • (1991) Plant and Soil , vol.135 , pp. 53-65
    • Thompson, J.A.1    Bhromsiri, A.2    Shutsrirung, A.3    Lillakan, S.4
  • 33
    • 0028097868 scopus 로고
    • A selective medium for the isolation and quantification of Bradyrhizobium japonicum and Bradyrhizobium elkanii strains from soils and inoculants
    • Tong, Z. and Sadowsky, M.J. 1994. A selective medium for the isolation and quantification of Bradyrhizobium japonicum and Bradyrhizobium elkanii strains from soils and inoculants. Applied and Environmental Microbiology 60: 581-586.
    • (1994) Applied and Environmental Microbiology , vol.60 , pp. 581-586
    • Tong, Z.1    Sadowsky, M.J.2
  • 34
    • 0034525526 scopus 로고    scopus 로고
    • Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gone and internally transcribed spacer region sequence divergence
    • van Berkum, P. and Fuhrmann, J.J. 2000. Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gone and internally transcribed spacer region sequence divergence. International Journal of Systematic and Evolutionary Microbiology 50: 2165-2172.
    • (2000) International Journal of Systematic and Evolutionary Microbiology , vol.50 , pp. 2165-2172
    • Van Berkum, P.1    Fuhrmann, J.J.2
  • 35
    • 0001275542 scopus 로고    scopus 로고
    • Repetitive sequence-based PCR (rep-PCR) DNA fingerprinting of bacterial genomes
    • F.J. de Bruijn, J.R. Lupski, and G.M. Weinstock, eds. Chapman and Hall, NY
    • Versalovic, J., de Bruijn, F.J., and Lupski, J.R. 1998. Repetitive sequence-based PCR (rep-PCR) DNA fingerprinting of bacterial genomes. In: Bacterial Genomes: Physical Structure and Analysis. F.J. de Bruijn, J.R. Lupski, and G.M. Weinstock, eds. Chapman and Hall, NY, pp. 437-454.
    • (1998) Bacterial Genomes: Physical Structure and Analysis , pp. 437-454
    • Versalovic, J.1    De Bruijn, F.J.2    Lupski, J.R.3
  • 37
    • 0030483387 scopus 로고    scopus 로고
    • Genetic variability of the common nod gene in soybean bradyrhizobia isolated in Thailand and Japan
    • Yokoyama, T., Ando, S., Murakami, T., and Imai, H. 1996. Genetic variability of the common nod gene in soybean bradyrhizobia isolated in Thailand and Japan. Canadian Journal of Microbiology 42: 1209-1218.
    • (1996) Canadian Journal of Microbiology , vol.42 , pp. 1209-1218
    • Yokoyama, T.1    Ando, S.2    Murakami, T.3    Imai, H.4
  • 38
    • 0030461091 scopus 로고    scopus 로고
    • Phylogeny and taxonomy of rhizobia
    • Young, J.P.W. 1996. Phylogeny and taxonomy of rhizobia. Plant and Soil 186: 45-52.
    • (1996) Plant and Soil , vol.186 , pp. 45-52
    • Young, J.P.W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.