A technique for the molecular genetic analysis of Daphnia resting eggs from sub-recent lake sediments

Journal of Paleolimnology

Volumn 27, Issue 4, 2002, Pages 481-486

  Reid, Vicky A ^a   Carvalho, Gary R ^a   George, D Glen ^b   Griffiths, Huw I ^a  

^a UNIVERSITY OF HULL   (United Kingdom)

^b CENTRE FOR ECOLOGY AND HYDROLOGY   (United Kingdom)

Author keywords

Ancient DNA; Daphnia galeata; Microsatellites; Paleolimnology; Polymerase Chain Reaction (PCR); Resting eggs

Indexed keywords

EGG; GENETIC ANALYSIS; LACUSTRINE DEPOSIT; PALEOENVIRONMENT; PALEOLIMNOLOGY; POLYMERASE CHAIN REACTION;

UNITED KINGDOM;

DAPHNIA; DAPHNIA GALEATA; INVERTEBRATA;

EID: 0036396086     PISSN: 09212728     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1020380918518     Document Type: Article

References (31)

1. Anderson R.O. 1959. A modified flotation technique for sorting bottom fauna samples. Limnol. Oceanogr. 4: 223-225.
2. Avise J.C. 1994. Molecular Markers, Natural History, and Evolution. Chapman & Hall, London, UK.
3. Cooper A., Mourer-Chauvire C., Chambers G.K., von Haeseler A., Wilson A.C. and Pääbo S. 1992. Independent origins of New Zealand moas and kiwis. Proc. Natl. Acad. Sci. USA 89: 8741-8744.
4. Cousyn C., De Meester L., Colbourne J.K., Brendonck L., Verschuren D. and Volckaert F. 2001. Rapid, local adaptation of zooplankton behavior to changes in predation pressure in the absence of neutral genetic changes. Proc. Natl. Acad. Sci. USA 98: 6256-6260.
5. De Stasio B.T. Jr. 1989. The seedbank of a freshwater crustacean: copepodology for the plant ecologist. Ecology 70: 1377-1389.
6. Duffy M.A., Perry L.J., Kearns C.M., Weider L.J. and Hairston N.G. Jr. 2000. Paleogenetic evidence for a past invasion of Onondaga Lake, New York, by exotic Daphnia curvirostris using mtDNA from dormant eggs. Limnol. Oceanogr. 45: 1409-1414.
7. Duigan C.A. and Birks H.H. 2000. The late-Glacial and early-Holocene palaeoecology of cladoceran microfossil assemblages of Kräkenes, western Norway, with a quantitative reconstruction of temperature changes. J. Paleolim. 23: 67-76.
8. Ender A., Schwenk K., Städler T., Streit B. and Schierwater B. 1996. RAPD identification of microsatellites in Daphnia. Mol. Ecol. 5: 437-441.
9. George D.G. and Taylor A.H. 1995. UK lake plankton and the Gulf Stream. Nature 378: 139-139.
10. Goloubinoff P., Pääbo S. and Wilson A.C. 1993. Evolution of maize inferred from sequence diversity of an Adh2 gene segment from archaeological specimens. Proc. Natl. Acad. Sci. USA 90: 1997-2001.
11. Gómez A. and Carvalho G.R. 2000. Sex, pathenogenesis and genetic structure of rotifers: microsatellite analysis of contemporary and resting egg bank populations. Mol. Ecol. 9: 203-214.
12. Gómez A., Carvalho G.R. and Lunt D.H. 2000. Phylogeography and regional endemism of a passively dispersing zooplankter: mitochondrial DNA variation in rotifer resting egg banks. Proc. Roy. Soc. London 267: 2189-2197.
13. Hairston N.G. Jr. and De Stasio B.T. Jr. 1988. Rate of evolution slowed by dormant propagule pool. Nature 336: 239-242.
14. Hairston N.G. Jr., Van Brunt R.A., Kearns C.M. and Engstrom D.R. 1995. Age and survivorship of diapausing eggs in a sediment egg bank. Ecology 76: 1706-1711.
15. Hairston N.G. Jr., Lampert W., Cáceres C.E., Holtmeier C.L., Weider L.J., Gaedke U. et al. 1999. Rapid evolution revealed by dormant eggs. Nature 401: 446-446.
16. Hoffmann W. 2000. Late-Glacial/Holocene succession of the chironomid and cladoceran fauna of the Soppensee (Central Switzerland). J. Paleolim. 25: 411-420.
17. Hurrell J.W. 1995. Decadal trends in the North-Atlantic Oscillation - regional temperatures and precipitation. Science 268: 676-679.
18. Hutchinson W.F., Carvalho G.R. and Rogers S.I. 1999. A nondestructive technique for the recovery of DNA from dried fish otoliths for subsequent molecular analysis. Mol. Ecol. 8: 893-894.
19. Jenkin B.M., Mortimer C.H. and Pennington W. 1941. The study of lake deposits. Nature 147: 496-500.
20. Kerfoot W.C., Robbins J.A. and Weider L.J. 1999. A new approach to historical reconstruction: combining descriptive and experimental paleolimnology. Limnol. Oceanogr. 44: 1232-1247.
21. Korholla A., Olander H. and Blom T. 2000. Cladoceran and chironomid assemblages as quantitative indicators of water depth in subarctic Fennoscandian lakes. J. Paleolim. 24: 43-54.
22. Moritz C. 1987. A note on the hatching and viability of Ceriodaphnia ephippia collected from lake sediment. Hydrobiologia 145: 309-314.
23. Reid V.A. 2000. Molecular genetic analysis of contemporary populations and resting egg banks of Daphnia, Ph.D. Thesis, University of Hull, Hull, UK, 226 pp.
24. Reid V.A., Carvalho G.R. and George D.G. 2000. Molecular genetic analysis of Daphnia in the English Lake District: species identity, hybridisation and resting egg banks. Freshwat. Biol. 44: 247-253.
25. Schwenk K. 1997. Evolutionary genetics of Daphnia species complexes - hybridism in syntopy, Ph.D. Thesis, Netherlands Institute of Ecology, Nieuwersluis, The Netherlands, 245 pp.
26. Singer-Sam J., Tanguay R.L. and Riggs A.D. 1989. Use of Chelex to improve the PCR signals from a small number of cells. Amplifications: a Forum for PCR Users 3: 11.
27. Thomas R.H. 1994. Analysis of DNA from natural history museum collections. In: Schierwater B., Streit B., Wagner G.P. and De Salle R. (eds), Molecular Ecology and Evolution: Approaches and Applications. Birkhauser Verlag, Basel, Switzerland, pp. 311-321.
28. Van Oppen M.J.H., Rico C., Deutsch J.C., Turner G.F. and Hewitt G.M. 1997. Isolation and characterisation of microsatellite loci in the cichlid fish Pseudotropheus zebra. Mol. Ecol. 6: 387-388.
29. Walsh P.S., Metzger D.A. and Higuchi R. 1991. Chelex 100 as a medium for simple extraction of DNA for PCR based typing from forensic material. Biotechniques 10: 506-513.
30. Weider L.J., Lampert W., Wessels M., Colbourne J.K. and Limburg P. 1997. Long-term genetic shifts in microcrustacean egg bank associated with anthropogenic changes in Lake Constance ecosystem. Proc. Roy. Soc. London 264: 1613-1618.
31. Vollmer C. 1912. Zur Entwicklung der Cladoceren aus dem Dauerei. Z. Wiss. Zool. 102: 646-700.