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Volumn 18, Issue 13, 2002, Pages 947-956

Common genetic arrangements among human immunodeficiency virus type 1 subtype A and D recombinant genomes vertically transmitted in Tanzania

Author keywords

[No Author keywords available]

Indexed keywords

GAG PROTEIN; GLYCOPROTEIN GP 120; GLYCOPROTEIN GP 41; POL PROTEIN; REV PROTEIN; TRANSACTIVATOR PROTEIN;

EID: 0036384363     PISSN: 08892229     EISSN: None     Source Type: Journal    
DOI: 10.1089/088922202760265614     Document Type: Article
Times cited : (17)

References (53)
  • 10
    • 0010621621 scopus 로고    scopus 로고
    • http://www.biols.susx.ac.uk/Biochem/Molbiol/maximum-chi-squared.html
  • 16
    • 0033557071 scopus 로고    scopus 로고
    • Transmission of human immunodeficiency type 1 viruses with intersubtype recombinant long terminal repeat sequences
    • Blackard JT, Renjifo BR, Mwakagile D, Montano MA, Fawzi W, and Essex M: Transmission of human immunodeficiency type 1 viruses with intersubtype recombinant long terminal repeat sequences. Virology 1999;254:220-225.
    • (1999) Virology , vol.254 , pp. 220-225
    • Blackard, J.T.1    Renjifo, B.R.2    Mwakagile, D.3    Montano, M.A.4    Fawzi, W.5    Essex, M.6
  • 18
    • 0028854679 scopus 로고
    • Genetic analysis of human immunodeficiency virus type 1 envelope V3 region isolates from mothers and infants after perinatal transmission
    • Ahmad N, Baroudy BM, Baker RC, and Chappey C: Genetic analysis of human immunodeficiency virus type 1 envelope V3 region isolates from mothers and infants after perinatal transmission. J Virol 1995;69:1001-1012.
    • (1995) J Virol , vol.69 , pp. 1001-1012
    • Ahmad, N.1    Baroudy, B.M.2    Baker, R.C.3    Chappey, C.4
  • 19
    • 0034284592 scopus 로고    scopus 로고
    • Diversity of the HIV-1 long terminal repeat following mother-to-child transmission
    • Blackard JT, Renjifo B, Chaplin B, Msamanga G, Fawzi W, and Essex M: Diversity of the HIV-1 long terminal repeat following mother-to-child transmission. Virology 2000;274:402-411.
    • (2000) Virology , vol.274 , pp. 402-411
    • Blackard, J.T.1    Renjifo, B.2    Chaplin, B.3    Msamanga, G.4    Fawzi, W.5    Essex, M.6
  • 21
    • 0030917946 scopus 로고    scopus 로고
    • Biological characterization of human immunodeficiency virus type 1 clones derived from different organs of an AIDS patient by long-range PCR
    • Dittmar MT, Simmons G, Donaldson Y, Simmonds P, Clapham PR, Schulz TF, and Weiss RA: Biological characterization of human immunodeficiency virus type 1 clones derived from different organs of an AIDS patient by long-range PCR. J Virol 1997;71:5140-5147.
    • (1997) J Virol , vol.71 , pp. 5140-5147
    • Dittmar, M.T.1    Simmons, G.2    Donaldson, Y.3    Simmonds, P.4    Clapham, P.R.5    Schulz, T.F.6    Weiss, R.A.7
  • 22
    • 0001987131 scopus 로고    scopus 로고
    • Reference sequences representing the principal genetic diversity of HIV-1 in the pandemic
    • (Korber B, Kuiken CL, Foley B, Hahn B, McCutchan F, Mellors JW, and Sodroski J, eds.). Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, New Mexico
    • Carr JK, Foley BT, Leitner T, Salminen M, Korber B, and McCutchan F: Reference sequences representing the principal genetic diversity of HIV-1 in the pandemic. In: Human Retroviruses and AIDS 1998: A Compilation and Analysis of Nucleic Acid and Amino Acid Sequences (Korber B, Kuiken CL, Foley B, Hahn B, McCutchan F, Mellors JW, and Sodroski J, eds.). Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, New Mexico, 1998, pp. III-10-III-19.
    • (1998) Human Retroviruses and AIDS 1998: A Compilation and Analysis of Nucleic Acid and Amino Acid Sequences
    • Carr, J.K.1    Foley, B.T.2    Leitner, T.3    Salminen, M.4    Korber, B.5    McCutchan, F.6
  • 23
    • 0028793170 scopus 로고
    • Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning
    • Salminen MO, Carr JK, Burke DS, and McCutchan FE: Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning. AIDS Res Hum Retroviruses 1995;11:1423-1425.
    • (1995) AIDS Res Hum Retroviruses , vol.11 , pp. 1423-1425
    • Salminen, M.O.1    Carr, J.K.2    Burke, D.S.3    McCutchan, F.E.4
  • 24
    • 0028884471 scopus 로고
    • A computer program designed to screen rapidly for HIV subtype 1 intersubtype recombinant sequences
    • Siepel AC, Halpern AL, Macken C, and Korber BT: A computer program designed to screen rapidly for HIV subtype 1 intersubtype recombinant sequences. AIDS Res Hum Retroviruses 1995;11:1413-1416.
    • (1995) AIDS Res Hum Retroviruses , vol.11 , pp. 1413-1416
    • Siepel, A.C.1    Halpern, A.L.2    Macken, C.3    Korber, B.T.4
  • 25
    • 0026708873 scopus 로고
    • Analyzing the mosaic structure of genes
    • Maynard Smith J: Analyzing the mosaic structure of genes. J Mol Evol 1992;34:126-129.
    • (1992) J Mol Evol , vol.34 , pp. 126-129
    • Maynard Smith, J.1
  • 26
    • 0034124124 scopus 로고    scopus 로고
    • Detecting hypermutations in viral sequences with an emphasis on G → A hypermutation
    • Rose PP and Korber BT: Detecting hypermutations in viral sequences with an emphasis on G → A hypermutation. Bioinformatics 2000;16:400-401.
    • (2000) Bioinformatics , vol.16 , pp. 400-401
    • Rose, P.P.1    Korber, B.T.2
  • 27
    • 0031025112 scopus 로고    scopus 로고
    • Identification of a replication-competent pathogenic human immunodeficiency virus type 1 with a duplication in the TCF-1α region but lacking NF-κB binding sites
    • Zhang L, Huang Y, Yuan H, Chen BK, Ip J, and Ho DD: Identification of a replication-competent pathogenic human immunodeficiency virus type 1 with a duplication in the TCF-1α region but lacking NF-κB binding sites. J Virol 1997;71:1651-1656.
    • (1997) J Virol , vol.71 , pp. 1651-1656
    • Zhang, L.1    Huang, Y.2    Yuan, H.3    Chen, B.K.4    Ip, J.5    Ho, D.D.6
  • 31
    • 0029824702 scopus 로고    scopus 로고
    • Point mutant frequencies in the pol gene of human immunodeficiency virus type 1 are two- to threefold lower than those of env
    • Quinones-Mateu ME, Holguin A, Dopazo J, Najera I, and Domingo E: Point mutant frequencies in the pol gene of human immunodeficiency virus type 1 are two- to threefold lower than those of env. AIDS Res Hum Retroviruses 1996;12:1117-1128.
    • (1996) AIDS Res Hum Retroviruses , vol.12 , pp. 1117-1128
    • Quinones-Mateu, M.E.1    Holguin, A.2    Dopazo, J.3    Najera, I.4    Domingo, E.5
  • 32
    • 0035903007 scopus 로고    scopus 로고
    • The UNAIDS network for HIV isolation and characterization: High proportion of unrelated HIV-1 intersubtype recombinants in the Mbeya region of southwest Tanzania
    • Hoelscher M, Kim B, Maboko L, Mhalu F, von Sonnenburg F, Birx DL, and McCutchan FE: The UNAIDS Network for HIV Isolation and Characterization: High proportion of unrelated HIV-1 intersubtype recombinants in the Mbeya region of southwest Tanzania. AIDS 2001;15:1461-1470.
    • (2001) AIDS , vol.15 , pp. 1461-1470
    • Hoelscher, M.1    Kim, B.2    Maboko, L.3    Mhalu, F.4    Von Sonnenburg, F.5    Birx, D.L.6    McCutchan, F.E.7
  • 33
    • 0034654019 scopus 로고    scopus 로고
    • Generation of intersubtype human immunodeficiency virus type 1 recombinants in env gene in vitro: Influences in the biological behavior and in the establishment of productive infections
    • Costa LJ, Munerato P, Diaz RS, and Tanuri A: Generation of intersubtype human immunodeficiency virus type 1 recombinants in env gene in vitro: Influences in the biological behavior and in the establishment of productive infections. Virology 2000;268:440-451.
    • (2000) Virology , vol.268 , pp. 440-451
    • Costa, L.J.1    Munerato, P.2    Diaz, R.S.3    Tanuri, A.4
  • 34
    • 0033979002 scopus 로고    scopus 로고
    • Spread of distinct human immunodeficiency virus type 1 AG recombinant lineages in Africa
    • Cornelissen M, van Den Burg R, Zorgdrager F, and Goudsmit J: Spread of distinct human immunodeficiency virus type 1 AG recombinant lineages in Africa. J Gen Virol 2000;81:515-523.
    • (2000) J Gen Virol , vol.81 , pp. 515-523
    • Cornelissen, M.1    Van den Burg, R.2    Zorgdrager, F.3    Goudsmit, J.4
  • 38
    • 0034468391 scopus 로고    scopus 로고
    • A recent outbreak of human immunodeficiency virus type 1 infection in southern China was initiated by two highly homogeneous, geographically separated strains, circulating recombinant form AE and a novel BC recombinant
    • Piyasirisilp S, McCutchan FE, Carr JK, Sanders-Buell E, Liu W, Chen J, Wagner R, Wolf H, Shao Y, Lai S, Beyrer C, and Yu XF: A recent outbreak of human immunodeficiency virus type 1 infection in southern China was initiated by two highly homogeneous, geographically separated strains, circulating recombinant form AE and a novel BC recombinant. J Virol 2000;74:11286-11295.
    • (2000) J Virol , vol.74 , pp. 11286-11295
    • Piyasirisilp, S.1    McCutchan, F.E.2    Carr, J.K.3    Sanders-Buell, E.4    Liu, W.5    Chen, J.6    Wagner, R.7    Wolf, H.8    Shao, Y.9    Lai, S.10    Beyrer, C.11    Yu, X.F.12
  • 39
    • 0033605698 scopus 로고    scopus 로고
    • Incorporation of Vpr into human immunodeficiency virus type 1 requires a direct interaction with the p6 domain of the p55 gag precursor
    • Bachand F, Yao XJ, Hrimech M, Rougeau N, and Cohen EA: Incorporation of Vpr into human immunodeficiency virus type 1 requires a direct interaction with the p6 domain of the p55 gag precursor. J Biol Chem 1999;274:9083-9091.
    • (1999) J Biol Chem , vol.274 , pp. 9083-9091
    • Bachand, F.1    Yao, X.J.2    Hrimech, M.3    Rougeau, N.4    Cohen, E.A.5
  • 40
    • 0027447213 scopus 로고
    • Cell-dependent requirement of human immunodeficiency virus type 1 Vif protein for maturation of viral particles
    • Sakai H, Shibata R, Sakuragi J, Sakuragi S, Kawamura M, and Adachi A: Cell-dependent requirement of human immunodeficiency virus type 1 Vif protein for maturation of viral particles. J Virol 1993;67:1663-1666.
    • (1993) J Virol , vol.67 , pp. 1663-1666
    • Sakai, H.1    Shibata, R.2    Sakuragi, J.3    Sakuragi, S.4    Kawamura, M.5    Adachi, A.6
  • 41
    • 0027198765 scopus 로고
    • - HIV-1 mutants in CEM cells suggests that Vif affects the late steps of the viral life cycle
    • - HIV-1 mutants in CEM cells suggests that Vif affects the late steps of the viral life cycle. Virology 1993;193:186-192.
    • (1993) Virology , vol.193 , pp. 186-192
    • Blanc, D.1    Patience, C.2    Schulz, T.F.3    Weiss, R.4    Spire, B.5
  • 43
    • 0024518918 scopus 로고
    • The HIV-1 rev trans-activator acts through a structured target sequence to activate nuclear export of unspliced viral mRNA
    • Malim MH, Hauber J, Le SY, Maizel JV, and Cullen BR: The HIV-1 rev trans-activator acts through a structured target sequence to activate nuclear export of unspliced viral mRNA. Nature 1989;338:254-257.
    • (1989) Nature , vol.338 , pp. 254-257
    • Malim, M.H.1    Hauber, J.2    Le, S.Y.3    Maizel, J.V.4    Cullen, B.R.5
  • 44
    • 0032958141 scopus 로고    scopus 로고
    • HIV-1 rev promotes the nuclear export of unspliced and singly spliced RNAs in a mammalian cell-free export system
    • Huffman KM, Arrigo SJ, and Schmidt MG: HIV-1 Rev promotes the nuclear export of unspliced and singly spliced RNAs in a mammalian cell-free export system. J Biomed Sci 1999;6:194-205.
    • (1999) J Biomed Sci , vol.6 , pp. 194-205
    • Huffman, K.M.1    Arrigo, S.J.2    Schmidt, M.G.3
  • 45
    • 0034030611 scopus 로고    scopus 로고
    • Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes A through G
    • Jeeninga RE, Hoogenkamp M, Armand-Ugon M, de Baar M, Verhoef K, and Berkhout B: Functional differences between the long terminal repeat transcriptional promoters of human immunodeficiency virus type 1 subtypes A through G. J Virol 2000;74:3740-3751.
    • (2000) J Virol , vol.74 , pp. 3740-3751
    • Jeeninga, R.E.1    Hoogenkamp, M.2    Armand-Ugon, M.3    De Baar, M.4    Verhoef, K.5    Berkhout, B.6
  • 47
    • 0025977774 scopus 로고
    • Selection, recombination and G → A hypermutation of human immunodeficiency virus type 1 genomes
    • Vartanian JP, Meyerhans A, Åsjö B, and Wain-Hobson S: Selection, recombination and G → A hypermutation of human immunodeficiency virus type 1 genomes. J Virol 1991;65:1779-1788.
    • (1991) J Virol , vol.65 , pp. 1779-1788
    • Vartanian, J.P.1    Meyerhans, A.2    Åsjö, B.3    Wain-Hobson, S.4
  • 48
    • 0025815375 scopus 로고
    • Molecular characterization of human immunodeficiency virus type 1 cloned directly from uncultured human brain tissue: Identification of replication-competent and -defective viral genomes
    • Li Y, Kappes JC, Conway JA, Price RW, Shaw GM, and Hahn BH: Molecular characterization of human immunodeficiency virus type 1 cloned directly from uncultured human brain tissue: Identification of replication-competent and -defective viral genomes. J Virol 1991;65:3973-3985.
    • (1991) J Virol , vol.65 , pp. 3973-3985
    • Li, Y.1    Kappes, J.C.2    Conway, J.A.3    Price, R.W.4    Shaw, G.M.5    Hahn, B.H.6
  • 49
    • 0026454728 scopus 로고
    • European Collaborative Study: Age-related standards for T lymphocyte subsets based on uninfected children born to human immunodeficiency virus 1-infected women
    • European Collaborative Study: Age-related standards for T lymphocyte subsets based on uninfected children born to human immunodeficiency virus 1-infected women. Pediatr Infect Dis J 1992;11:1018-1026.
    • (1992) Pediatr Infect Dis J , vol.11 , pp. 1018-1026


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