Molecular recognition studies using the atomic force microscope

Methods in Cell Biology

Volumn 2002, Issue 68, 2002, Pages 115-139

  Hinterdorfer, Peter ^a  

^a JOHANNES KEPLER UNIVERSITY LINZ   (Austria)

Author keywords

[No Author keywords available]

Indexed keywords

CADHERIN; CALCIUM; CELL SURFACE RECEPTOR; CROSS LINKING REAGENT; GLUCOSE TRANSPORTER; HYBRID PROTEIN; IMMUNOGLOBULIN G; LEUKOCYTE ANTIGEN; LIGAND; LYSOZYME; MEMBRANE PROTEIN; SLC5A1 PROTEIN, HUMAN; SLC5A1 PROTEIN, MOUSE; SODIUM GLUCOSE COTRANSPORTER 1; VASCULAR ENDOTHELIAL CADHERIN;

ANIMAL; ARTICLE; ATOMIC FORCE MICROSCOPY; CELL MEMBRANE; CHEMISTRY; CHO CELL; EPITOPE MAPPING; GENETICS; HAMSTER; HUMAN; INSTRUMENTATION; METABOLISM; METHODOLOGY; MOUSE; PROTEIN CONFORMATION;

ANIMALS; ANTIGENS, CD; CADHERINS; CALCIUM; CELL MEMBRANE; CHO CELLS; CRICETINAE; CROSS-LINKING REAGENTS; EPITOPE MAPPING; HUMANS; IMMUNOGLOBULIN G; LIGANDS; MEMBRANE GLYCOPROTEINS; MICE; MICROSCOPY, ATOMIC FORCE; MONOSACCHARIDE TRANSPORT PROTEINS; MURAMIDASE; PROTEIN CONFORMATION; RECEPTORS, CELL SURFACE; RECOMBINANT FUSION PROTEINS; SODIUM-GLUCOSE TRANSPORTER 1;

EID: 0036368452     PISSN: 0091679X     EISSN: None     Source Type: Book Series    
DOI: 10.1016/s0091-679x(02)68007-0     Document Type: Review

References (50)

1. Allen, S., Chen, X., Davies, J., Davies, M. C., Dawkes, A. C., Edwards, J. C., Roberts, C. J., Sefton, J., Tendler, S. J. B., and Williams, P. M. (1997). Spatial mapping of specific molecular recognition sites by atomic force microscopy. Biochemistry 36, 7457-7463.
2. Baumgartner, W., Hinterdorfer, P., Ness, W., Raab, A., Vestweber, D., Schindler, H., and Drenckhahn, D. (2000). Cadherin interaction probed by atomic force microscopy. Proc. Natl. Acad. Sci. U.S.A. 8, 4005-4010.
3. Baumgartner, W., Hinterdorfer, P., and Schindler, H. (2000). Data analysis of interaction forces measured with the atomic force microscope. Ultramicroscopy 82, 85-95.
4. Baumgartner, W., Gruber, H. J., Hinterdorfer, H., and Drenckhahn, D. (2000). Affinity of trans-interacting VE-cadherin determined by atomic force microscopy. Single Mol. 1, 119-122.
5. Binnig, G., Quate, C. F., and Gerber, Ch. (1986). Atomic force microscope. Phys. Rev. Lett. 56, 930-933.
6. Bell, G. I. (1978). Models for the specific adhesion of cells to cells. Science 200, 618-627.
7. Boland, T., and Ratner, B. D. (1995). Direct measurement of hydrogen bonding in DNA nucleotide bases by atomic force microscopy. Proc. Natl. Acad. Sci. U.S.A. 92, 5297-5301.
8. Chen, A., and Moy, V. T. (2000). Cross-linking of cell surface receptors enhances cooperativity of molecular adhesion. Biophys. J. 78, 2814-2820.
9. Chilkoti, A., Boland, T., Ratner, B., and Stayton, P. S. (1995). The relationship between ligand-binding thermodynamics and protein-ligand interaction forces measured by atomic force microscopy. Biophys. J. 69, 2125-2130.
10. Conti, M., Falini, G., and Samori, B. (2000). How strong is the coordination bond between a histidine tag and Ni-Nitriloacetate? An experiment of mechanochemistry on single molecules. Angew. Chem. 112, 221-224.
11. Dammer, U., Hegner, M., Anselmetti, D., Wagner, P., Dreier, M., Huber, W., and Güntherodt, H.-J. (1996). Specific antigen/antibody interactions measured by force microscopy. Biophys. J. 70, 2437-2441.
12. Evans, E., and Ritchie, K. (1997). Dynamic strength of molecular adhesion bonds. Biophys. J. 72, 1541-1555.
13. Florin, E. L., Moy, V. T., and Gaub, H. E. (1994). Adhesion forces between individual ligand receptor pairs. Science 264, 415-417.
14. Fritz, J., Katopidis, A. G., Kolbinger, F., and Anselmetti, D. (1998). Force-mediated kinetics of single P-selectin/ligand complexes observed by atomic force microscopy. Proc. Natl. Acad. Sci. U.S.A. 95, 12, 283-12, 288.
15. Grandbois, M., Beyer, M., Rief, M., Clausen-Schaumann, H., and Gaub, H. E. (1999). How strong is a covalent bond. Science 283, 1727-1730.
16. Grubmüller, H., Heymann, B., and Tavan, P. (1996). Ligand binding: Molecular mechanics calculation of the streptavidin-biotin rupture force. Science 271, 997-999.
17. Han, W., Lindsay, S. M., and Jing, T. (1996). A magnetically driven oscillating probe microscope for operation in liquid. Appl. Phys. Lett. 69, 1-3.
18. Han, W., Lindsay, S. M., Dlakic, M., and Harrington, R. E. (1997). Kinked DNA. Nature 386, 563.
19. Haselgrübler, Th., Amerstorfer, A., Schindler, H., and Gruber, H. J. (1995). Synthesis and applications of a new poly(ethylene glycol) derivative for the crosslinking of amines with thiols. Bioconjugate Chem. 6, 242-248.
20. Hinterdorfer, P., Baber, G., and Tamm, L. K. (1994). Reconstitution of membrane fusion sites. A total internal reflection fluorescence microscopy study of influenza hemagglutinin-mediated membrane fusion. J. Biol. Chem. 269, 20, 360-20, 368.
21. Hinterdorfer, P., Baumgartner, W., Gruber, H. J., Schilcher, K., and Schindler, H. (1996). Detection and localization of individual antibody-antigen recognition events by atomic force microscopy. Proc. Natl. Acad. Sci. U.S.A. 93, 3477-3481.
22. Hinterdorfer, P., Schilcher, K., Baumgartner, W., Gruber, H. J., and Schindler, H. (1998). A mechanistic study of the dissociation of individual antibody-antigen pairs by atomoic force microscopy. Nanobiology 4, 39-50.
23. Hinterdorfer, P., Kienberger, F., Raab, A., Gruber, H. J., Baumgartner, W., Kada, G., Riener, C., Wielert-Badt, S., Borken, C., and Schindler, H. (2000). Poly(ethylene glycol): An ideal spacer for molecular recognition force microscopy/spectroscopy. Single Mol. 1, 99-103.
24. Izraelev, S., Stepaniants, S., Baisera, M., Oono, Y., and Schulten, K. (1997). Molecular dynamics study of unbinding of the avidin-biotin complex. Biophys. J. 72, 1568-1581.
25. 2+ release channel (RYR1). Ultramicroscopy 86, 129-137.
26. Kalb, E., Frey, S., and Tamm, L. K. (1992). Formation of supported planar bilayers by fusion of vesicles to supported phospholipid monolayers. Biochim. Biophys. Acta 1103, 307-316.
27. Kienberger, F., Kada, G., Gruber, H. J., Pastushenko, V. Ph., Riener, C., Trieb, M., Knaus, H.-G., Schindler, H., and Hinterdorfer, P. (2000). Recognition force spectroscopy studies of the NTA-His6 bond. Single Mol. 1, 59-65.
28. Kienberger, F., Pastushenko, V. Ph., Kada, G., Gruber, H. J., Riener, C., Schindler, H., and Hinterdorfer, P. (2000). Static and dynamical properties of single poly(ethylene glycol) molecules investigated by force spectroscopy. Single Mol. 1, 123-128.
29. Kiss, E., and Gölander, C.-G. (1990). Chemical derivatization of muscovite mica surfaces. Coll. Surf. 49, 335-342.
30. Lee, G. U., Kidwell, D. A., and Colton, R. J. (1994). Sensing discrete streptavidin-biotin interactions with atomic force microscopy. Langmuir 10, 354-357.
31. Lee, G. U., Chrisey, A. C., and Colton, J. C. (1994). Direct measurement of the forces between complementary strands of DNA. Science 266, 771-773.
32. Legrimellec, C., Lesniewska, E., Giocondi, M. C., Finot, E., Vie, V., and Goudonnet, J. P. (1998). Imaging the surface of living cells by low-force contact-mode atomic force microscopy. Biophys. J. 75, 695-703.
33. Lehenkari, P. P., and Horton, M. A. (1999). Single integrin molecule adhesion forces in intact cells measured by atomic force microscopy. Biochem. Biophys. Res. Commun. 259, 645-650.
34. Lin, J.-T., Kormanec, J., Homerova, D., and Kinne, R. K.-H. (1999). Probing transmembrane topology of the high affinity sodium/glucose cotransporter (SGLT1) with histidine tagged mutants. J. Membr. Biol. 170, 243-252.
35. Ludwig, M., Dettmann, W., and Gaub, H. E. (1997). Atomic force microscopy imaging contrast based on molecuar recognition. Biophys. J. 72, 445-448.
36. Marzsalek, P. E., Oberhauser, A. F., Pang, Y.-P., and Fernandez, J. M. (1998). Polysaccharide elasticity governed by chair-boat transitions of the glucopyranose ring. Nature 396, 661-664.
37. Moy, V. T., Florin, E.-L., and Gaub, H. E. (1994). Adhesive forces between ligand and receptor measured by AFM. Science 266, 257-259.
38. Oberhauser, A. F., Marzsalek, P. E., Erickson, H. P., and Fernandez, J. M. (1998). The molecular elasticity of the extracellular matrix tenascin. Nature 393, 181-185.
39. Oesterhelt, F., Rief, M., and Gaub, H. E. (1999). Single molecule force spectroscopy by AFM indicates helical structure of poly(ethylene-glycol) in water. New J. Phys. 1, 6.1.-6.11.
40. Raab, A., Han, W., Badt, D., Smith-Gill, S. J., Lindsay, S. M., Schindler, H., and Hinterdorfer, P. (1999). Antibody recognition imaging by force microscopy. Nature Biotechnol. 17, 902-905.
41. Rief, M., Oesterhelt, F., Heyman, B., and Gaub, H. E. (1997). Single molecule force spectroscopy on polysaccharides by atomic force microscopy. Science 275, 1295-1297.
42. Rief, M., Gautel, M., Oesterhelt, F., Fernandez, J. M., and Gaub, H. E. (1997). Reversible unfolding of individual titin immunoglobulin domains by AFM. Science 276, 1109-1112.
43. Ros, R., Schwesinger, F., Anselmetti, D., Kubon, M., Schäfer, R., Plückthun, A., and Tiefenauer, L. (1998). Antigen binding forces of individually addressed single-chain Fv antibody molecules. Proc. Natl. Acad. Sci. U.S.A. 95, 7402-7405.
44. Schilcher, K., Hinterdorfer, P., Gruber, H. J., and Schindler, H. (1997). A non-invasive method for the tight anchoring of cells for scanning force microscopy. Cell. Biol. Int. 21, 769-778.
45. Schmidt, Th., Schütz, G. J., Baumgartner, W., Gruber, H. J., and Schindler, H. (1996). Imaging of single molecule diffusion. Proc. Natl. Acad. Sci. U.S.A. 93, 2926-2929.
46. Schmitt, L., Ludwig, M., Gaub, H. E., and Tampe, R. (2000). A metal-chelating microscopy tip as a new toolbox for single-molecule experiments by atomic force microscopy. Biophys. J. 78, 3275-3285.
47. Strunz, T., Oroszlan, K., Schäfer, R., and Güntherodt, H.-G. (1999). Dynamic force spectroscopy of single DNA molecules. Proc. Natl. Acad. Sci. U.S.A. 96, 11, 277-11, 282.
48. +/D-glucose cotransporter in brush border membranes by molecular recognition force microscopy. Submitted for publication.
49. Willemsen, O. H., Snel, M. M. E., van der Werf, K. O., de Grooth, B. G., Greve, J., Hinterdorfer, P., Gruber, H. J., Schindler, H., van Kyook, Y., and Figdor, C. G. (1998). Simultaneous height and adhesion imaging of antibody antigen interactions by atomic force microscopy. Biophys. J. 57, 2220-2228.
50. Wong, S. S., Joselevich, E., Woolley, A. T., Cheung, C. L., and Lieber, C. M. (1998). Covalently functionalyzed nanotubes as nanometre-sized probes in chemistry and biology. Nature 394, 52-55.