Worldwide distribution of Nitrosococcus oceani, a marine ammonia-oxidizing γ-proteobacterium, detected by PCR and sequencing of 16S rRNA and amoA genes

Applied and Environmental Microbiology

Volumn 68, Issue 8, 2002, Pages 4153-4157

  Ward, Bess B ^a   O'Mullan, Gregory D ^a  

^a PRINCETON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; DNA; GENES; RNA;

ENVIRONMENTAL SEQUENCES;

MICROBIOLOGY;

AMMONIA; DNA; RIBOSOME RNA; RNA 16S;

BACTERIUM; GEOGRAPHICAL DISTRIBUTION; MARINE ENVIRONMENT; POLYMERASE CHAIN REACTION;

ARTICLE; BACTERIUM DETECTION; GRAM NEGATIVE BACTERIUM; MARINE ENVIRONMENT; NITROSOCOCCUS OCEANI; NONHUMAN; NUCLEOTIDE SEQUENCE; OXIDATION; PHYLOGENY; POLYMERASE CHAIN REACTION; STRAIN DIFFERENCE;

AMMONIA; ATLANTIC OCEAN; DNA, RIBOSOMAL; GAMMAPROTEOBACTERIA; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; OXIDOREDUCTASES; PACIFIC OCEAN; PHYLOGENY; POLYMERASE CHAIN REACTION; RNA, RIBOSOMAL, 16S; SEAWATER;

BACTERIA (MICROORGANISMS); ENVIRONMENTAL SEQUENCE; GAMMAPROTEOBACTERIA; NEGIBACTERIA; NITROSOCOCCUS; NITROSOCOCCUS OCEANI; NITROSOMONADALES; PROTEOBACTERIA; UNCULTURED GAMMA PROTEOBACTERIUM;

EID: 0036323050     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.68.8.4153-4157.2002     Document Type: Article

References (24)

1. The isolation, purification and some kinetic studies of marine nitrifying bacteria
2. Nitrite reductase genes in ammonia-oxidizing bacteria
3. Phylip - Phylogeny inference package
4. The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal-RNA gene-sequences
5. Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related
6. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
7. Ammonia-oxidizing bacteria: A model for molecular microbial ecology
8. Potential risks of gene amplification by PCR as determined by 16S rDNA analysis of a mixed culture of strict barophilic bacteria
9. The ammonia monooxygenase structural gene amoA as a functional marker: Molecular fine-scale analysis of natural ammonia-oxidizing populations
10. Taxonomic note: A place for DNA-RNA reassociation and 16S rRNA sequence analysis in the present species definition of bacteriology
11. Detection of ammonium-oxidizing bacteria of the beta-subclass of the class proteobacteria in aquatic samples with the PCR
12. The abundance of ammonium-oxidizing bacteria in Lake Bonney. Antarctica, determined by immunofluorescence, PCR and in situ hybridization
13. Nitrification in aquatic systems
14. Nitrogen transformations in the Southern California Bight
15. Oceanic distribution of ammonium-oxidizing bacteria determined by immunofluorescent assay
16. Marine ammonium- and nitrite-oxidizing bacteria: Serological diversity determined by immunofluorescence in culture and in the environment
17. Chemoautotrophic activity and nitrification in the oxygen minimum zone off Peru
18. Biological nitrogen cycling in the nitracline
19. Analysis of ammonia-oxidizing bacteria from hypersaline Mono Lake. California, on the basis of 16S rRNA sequences
20. Characteristics of a marine nitrifying bacterium. Nitrosocystis oceanus sp. n. Limnol
21. Comparison of the morphology and deoxyribonucleic acid composition of 27 strains of nitrifying bacteria
22. Detection of Nitrosococcus oceanus in a Mediterranean lagoon by immunofluorescence