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Volumn 31, Issue 1, 2001, Pages 306-322

Provably fast and accurate recovery of evolutionary trees through harmonic greedy triplets

Author keywords

Computational learning; Evolutionary trees; Harmonic greedy triplets; The Jukes Cantor model of evolution

Indexed keywords

COMPUTATIONAL COMPLEXITY; LEARNING ALGORITHMS; MATRIX ALGEBRA; POLYNOMIALS; PROBABILITY; TREES (MATHEMATICS);

EID: 0036214723     PISSN: 00975397     EISSN: None     Source Type: Journal    
DOI: 10.1137/S009753970037905X     Document Type: Article
Times cited : (15)

References (22)
  • 1
    • 0032256591 scopus 로고    scopus 로고
    • On the approximability of numerical taxonomy (fitting distances by tree metrics)
    • R. AGARWALA, V. BAFNA, M. FARACH, M. PATERSON, AND M. THORUP, On the approximability of numerical taxonomy (fitting distances by tree metrics), SIAM J. Comput., 28 (1999), pp. 1073-1085.
    • (1999) SIAM J. Comput. , vol.28 , pp. 1073-1085
    • Agarwala, R.1    Bafna, V.2    Farach, M.3    Paterson, M.4    Thorup, M.5
  • 3
    • 0001656793 scopus 로고    scopus 로고
    • The performance of neighbor-joining algorithms of phylogeny reconstruction
    • K. ATTESON, The performance of neighbor-joining algorithms of phylogeny reconstruction, Algorithmica, 25 (1999), pp. 251-278.
    • (1999) Algorithmica , vol.25 , pp. 251-278
    • Atteson, K.1
  • 7
    • 0023079987 scopus 로고    scopus 로고
    • Computational complexity of inferring phylogenies from dissimilarity matrices
    • W. H. E. DAY, Computational complexity of inferring phylogenies from dissimilarity matrices, Bulletin of Mathematical Biology, 49 (1997), pp. 461-467.
    • (1997) Bulletin of Mathematical Biology , vol.49 , pp. 461-467
    • Day, W.H.E.1
  • 8
    • 0003088855 scopus 로고
    • The computational complexity of inferring rooted phylogenies by parsimony
    • W. H. E. DAY, D. S. JOHNSON, AND D. SANKOFF, The computational complexity of inferring rooted phylogenies by parsimony, Math. Biosci., 81 (1986), pp. 33-42.
    • (1986) Math. Biosci. , vol.81 , pp. 33-42
    • Day, W.H.E.1    Johnson, D.S.2    Sankoff, D.3
  • 12
    • 0000161374 scopus 로고    scopus 로고
    • Efficient algorithms for inverting evolution
    • M. FARACH AND S. KANNAN, Efficient algorithms for inverting evolution, J. ACM, 46 (1999), pp. 437-449.
    • (1999) J. ACM , vol.46 , pp. 437-449
    • Farach, M.1    Kannan, S.2
  • 13
    • 0000209031 scopus 로고
    • Numerical methods for inferring evolutionary trees
    • J. FELSENSTEIN, Numerical methods for inferring evolutionary trees, The Quarterly Review of Biology, 57 (1982), pp. 379-404.
    • (1982) The Quarterly Review of Biology , vol.57 , pp. 379-404
    • Felsenstein, J.1
  • 14
    • 0008781183 scopus 로고
    • Inferring evolutionary trees from DNA sequences
    • B. Weir, ed., Dekker, New York
    • J. FELSENSTEIN, Inferring evolutionary trees from DNA sequences, in Statistical Analysis of DNA Sequence Data, B. Weir, ed., Dekker, New York, 1983, pp. 133-150.
    • (1983) Statistical Analysis of DNA Sequence Data , pp. 133-150
    • Felsenstein, J.1
  • 15
    • 0001027766 scopus 로고
    • Statistical inference of phylogenies
    • J. FELSENSTEIN, Statistical inference of phylogenies, J. Roy. Statist. Soc. Ser. A, 146 (1983), pp. 246-272.
    • (1983) J. Roy. Statist. Soc. Ser. A , vol.146 , pp. 246-272
    • Felsenstein, J.1
  • 17
    • 84947403595 scopus 로고
    • Probability inequalities for sums of bounded random variables
    • W. HOEFFDING, Probability inequalities for sums of bounded random variables, J. Amer. Statist. Assoc., 58 (1963), pp. 13-30.
    • (1963) J. Amer. Statist. Assoc. , vol.58 , pp. 13-30
    • Hoeffding, W.1
  • 18
    • 0032746022 scopus 로고    scopus 로고
    • Disk-covering, a fast converging method for phylogenetic tree reconstruction
    • D. HUSON, S. NETTLES, AND T. WARNOW, Disk-covering, a fast converging method for phylogenetic tree reconstruction, Journal of Computational Biology, 6 (1999), pp. 369-386.
    • (1999) Journal of Computational Biology , vol.6 , pp. 369-386
    • Huson, D.1    Nettles, S.2    Warnow, T.3
  • 20
    • 0000215283 scopus 로고    scopus 로고
    • Success of parsimony in the four-taxon case: Long-branch repulsion by likelihood in the Farris zone
    • M. E. SIDDALL, Success of parsimony in the four-taxon case: Long-branch repulsion by likelihood in the Farris zone, Cladistics, 14 (1998), pp. 209-220.
    • (1998) Cladistics , vol.14 , pp. 209-220
    • Siddall, M.E.1
  • 21
    • 43949153645 scopus 로고
    • Recovering a tree from the leaf colourations it generates under a Markov model
    • M. STEEL, Recovering a tree from the leaf colourations it generates under a Markov model, Appl. Math. Lett., 7 (1994), pp. 19-23.
    • (1994) Appl. Math. Lett. , vol.7 , pp. 19-23
    • Steel, M.1
  • 22
    • 0001336205 scopus 로고    scopus 로고
    • Phylogenetic inference
    • D. M. Hillis, C. Moritz, and B. K. Mable, eds., Sinauer Associates, Sunderland, MA
    • D. L. SWOFFORD, G. J. OLSEN, P. J. WADDELL, AND D. M. HILLIS, Phylogenetic inference, in Molecular Systematics, 2nd ed., D. M. Hillis, C. Moritz, and B. K. Mable, eds., Sinauer Associates, Sunderland, MA, 1996, pp. 407-514.
    • (1996) Molecular Systematics, 2nd Ed. , pp. 407-514
    • Swofford, D.L.1    Olsen, G.J.2    Waddell, P.J.3    Hillis, D.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.