Evaluation of ribosomal RNA gene restriction patterns for the classification of Bacillus species and related genera

Journal of Applied Microbiology

Volumn 92, Issue 1, 2002, Pages 97-108

  Joung, K B ^a   Cote J C ^b  

^a UNIVERSITÉ DU QUÉBEC À MONTRÉAL   (Canada)

^b AGRICULTURE AND AGRI FOOD CANADA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIOLOGY; GENES; RNA;

16S RRNA GENE; 16S RRNA GENE SEQUENCE; BACILLUS SPECIES; BANDING PATTERNS; DENDROGRAMS; HYBRIDISATION; PATTERN SIMILARITY; RIBOSOMAL RNA; RNA GENES; RRNA GENES;

PHYLOGENETIC;

BACTERIAL RNA; RIBOSOME RNA; RNA 16S; RNA 23S; RNA 5S;

BACTERIUM; RNA; TAXONOMY;

ARTICLE; BACILLUS; BACTERIUM IDENTIFICATION; CLASSIFICATION; CONTROLLED STUDY; GENE CLUSTER; GENUS; NONHUMAN; PHENOTYPE; PHYLOGENETIC TREE; RESTRICTION MAPPING; RNA FINGERPRINTING; RNA GENE; RNA HYBRIDIZATION; RNA SEQUENCE; SEQUENCE ANALYSIS; SPECIES DIFFERENCE; TAXONOMY;

BACILLUS; BACTERIA (MICROORGANISMS); POSIBACTERIA; UNIDENTIFIED BACTERIOPHAGE;

EID: 0036200305     PISSN: 13645072     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2672.2002.01507.x     Document Type: Article

References (46)

1. Phylogenetic heterogeneity of the genus Bacillus revealed by comparative analysis of small-subunit-ribosomal RNA sequences
2. Molecular identification of rRNA group 3 Bacilli (Ash, Farrow, Wallbanks and Collins) using a PCR probe test
3. Preparation and analysis of DNA
4. Comparative zone electrophoresis of enzymes in the genus Bacillus
5. Identification of Bacillus species
6. Microbes I have known: A study of those associated with fermented products
7. Usefulness of the ID32 staph system and a method based on rRNA gene restriction site polymorphism analysis for species and subspecies identification of Staphylococcal clinical isolates
8. The genus Bacillus
9. Evaluation of a ribosomal RNA gene probe for the identification of species and subspecies within the genus Staphylococcus
10. The DNA composition of the type strains of the genus Bacillus
11. How close is close: 16S sequence identity may not be sufficient to guarantee species identity
12. Analysis of Borrelia species associated with Lyme disease by rRNA gene restriction fragment length polymorphism
13. DNA probes for the identification of microorganisms
14. Typing of Enterococcus species by DNA restriction fragment analysis
15. Regulation of polyglutamate production in Bacillus subtilis (natto): Transformation of high PGA productivity
16. Virgibacillus: A new genus to accommodate Bacillus pantothenticus (Proom and Knight 1950). Emended description of Virgibacillus pantothenticus
17. Plasmid transformation in Bacillus subtilis. Effect of the insertion of Bacillus subtilis rRNA genes into plasmids
18. Evaluation of a molecular identification scheme based on 23S rRNA gene polymorphisms for differentiating canine and feline gastric Helicobacter spp.
19. Phylogenetic analysis of Bacillus thuringiensis serovars based on 16S and rRNA gene restriction fragment length polymorphisms
20. Fatty acids of the genus Bacillus: An example of branched-chain preference
21. Identification of Bacillus strains using API system
22. Bacterial phylogeny based on 16S and 23S rRNA sequence analysis
23. Campylobacter species identification based on polymorphism of DNA encoding rRNA
24. DNA relatedness of Bacillus brevis Migula 1900 strains and proposal of Bacillus agri sp. nov., nom. rev. and Bacillus centrosporus sp. nov., nom. rev.
25. Biotype and ribotype diversity among Lactobacillus isolates from the mouse ileum
26. Pyrolysis gas-liquid chromatographic studies
27. The genus Bacillus: A numerical analysis
28. Specific and intraspecific molecular typing of lactococci based on polymorphism of DNA encoding rRNA
29. Phylogenetic diversity in the genus Bacillus as seen by 16S rRNA sequencing studies
30. Identification of species of the genus Legionella using a cloned rRNA gene from Legionella pneumophila
31. Proposal for two new genera, Brevibacillus gen. nov. and Aneurinibacillus gen. nov.
32. Bacillus galactophils is a later subjective synonym of Bacillus agri
33. Proposal of Bacillus reuszeri sp. nov., Bacillus formosus sp. nov., nom. rev. and Bacillus borstelensis sp. nov., nom. rev.
34. Detection of specific sequences among DNA fragments separated by gel electrophoresis
35. Comparative 16S rRNA oligonucleotide analyses and murein types of round-spore-forming bacilli and non-spore-forming relatives
36. Characterization of Bacillus brevis with descriptions of Bacillus migulanus sp. nov., Bacillus choshinensis sp. nov., Bacillus parabrevis sp. nov. and Bacillus galactophilus sp. nov.
37. Estimation of DNA sequence divergence from comparison of restriction endonuclease digests
38. Gracilibacillus gen. nov., with description of Gracilibacillus halotolerans gen. nov., sp. nov., transfer of Bacillus dipsosauri to Gracilibacillus dipsauri comb. nov. and Bacillus salexigens to the genus Salibacillus gen. nov., as Salibacillus salexigens comb. nov.
39. Comparative sequence analyses on the 16S rRNA (rDNA) of Bacillus acidocaldarius, Bacillus acidoterrestris, and Bacillus cycloheptanicus and proposal for creation of a new genus, Alicyclobacillus gen. nov.