Phylogenetic relationships of Asian and European pig breeds determined by mitochondrial DNA D-loop sequence polymorphism

Animal Genetics

Volumn 33, Issue 1, 2002, Pages 19-25

  Kim, K I ^a   Lee, J H ^b   Li, K ^c   Zhang, Y P ^d   Lee, S S ^e   Gongora, J ^b   Moran, C ^b  

^a Jeju National University   (South Korea)

^b UNIVERSITY OF SYDNEY   (Australia)

^c HUAZHONG AGRICULTURAL UNIVERSITY   (China)

^d INSTITUTE OF GEOLOGY AND GEOPHYSICS   (China)

^e Cheju Agricultural Experimental Station   (South Korea)

Author keywords

D loop; Mitochondrial DNA; Phylogeny; Pig; Polymorphism

Indexed keywords

ANIMALS; AUSTRALIA; BASE SEQUENCE; CHINA; COLOMBIA; DNA, MITOCHONDRIAL; EVOLUTION, MOLECULAR; GREAT BRITAIN; KOREA; LIKELIHOOD FUNCTIONS; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMORPHISM, GENETIC; SWINE;

MACROPUS SP.; MAMMALIA; PECARI TAJACU; PIERIS BRASSICAE; SUS SCROFA; TAYASSU;

EID: 0036171461     PISSN: 02689146     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2052.2002.00784.x     Document Type: Article

References (33)

1. The use of restriction endonucleases to measure mitochondrial DNA sequence relatedness in natural populations. I. Population structure and evolution in the genus Peromyscus
2. Intraspecific phylogeography: The mitochondrial DNA bridge between population genetics and systematics
3. Mitochondrial diversity and origin of African and European cattle
4. Rapid evolution of mitochondrial DNA
5. Polymorphic sites and the mechanism of evolution in human mitochondrial DNA
6. Kangaroo Island's wild pigs. Their possible origin
7. Evolutionary trees from DNA sequences: A maximum likelihood approach
8. Confidence limits on phylogenies: An approach using the bootstrap
9. On the problem of discovering the most parsimonious tree
10. Transcribed heteroplasmic repeated sequences in the porcine mitochondrial DNA D-loop region
11. The origin of the domestic pig: Independent domestication and subsequent introgression
12. Animal mitochondrial DNA as a genetic marker in population biology and evolutionary biology
13. The effects of social, geographical structure, and population size on the evolution of mitochondrial DNA: II. Molecular clocks and lineage sorting period
14. Mitochondrial genetic variation in Chinese pigs and wild boars
15. Genetic aspects of domestication, common breeds and their origin
16. The use of genetic relationships among cattle breeds in the formation of rational breeding policies: An example with South Devon (South Africa) and Gelvieh
17. Phylogenetic relationships of Cheju horses to other breeds as determined by mtDNA D-loop sequence polymorphism
18. The origin and genetic differentiation of native breeds of pigs in southwest China: An approach from mitochondrial DNA polymorphism
19. Evidence for two independent domestications of cattle
20. Mitochondrial DNA variation and evolution of Japanese black cattle (Bos taurus)
21. Simple salting out procedure for extracting DNA from human nucleated cells
22. Geographic population structure and sequence divergence in the mitochondrial DNA control region of the Japanese wild boar (Sus scrofa leucomystax), with reference to those of domestic pigs
23. Evolutionary genetics of the suiformes as reconstructed using mtDNA sequencing
24. A statistical method for evaluating systematic relationships
25. Localization of swine PRE-1 homologues in 13 loci of Phacochoerus aethiopicus and Tayassu tajacu genomes, and their sequence divergence
26. CLUSTAL-W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
27. The complete mitochondrial DNA sequence of the pig (Sus scrofa)
28. African populations and the evolution of human mitochondrial DNA
29. Polymorphism of mitochondrial DNA in pigs based on restriction endonuclease cleavage patterns
30. Pig mitochondrial DNA: Polymorphism, restriction map orientation and sequence data
31. Animal mitochondrial DNA: Structure and evolution