Exploring the phylogenetic utility of ITS sequences for animals: A test case for abalone (Haliotis)

Journal of Molecular Evolution

Volumn 54, Issue 2, 2002, Pages 246-257

  Coleman, Annette W ^a   Vacquier, Victor D ^b  

^a BROWN UNIVERSITY   (United States)

^b UNIVERSITY OF CALIFORNIA SAN DIEGO   (United States)

Author keywords

Abalone; Biological species; Haliotis; Internal transcribed spacer; ITS; Phylogeny; Secondary structure

Indexed keywords

INTERNAL TRANSCRIBED SPACER;

ARTICLE; CONTROLLED STUDY; GENETIC ANALYSIS; GENETIC VARIABILITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; RNA TRANSCRIPTION; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SPECIES DIFFERENCE;

ANIMALS; BASE SEQUENCE; DNA, INTERGENIC; EUKARYOTIC CELLS; GASTROPODA; NUCLEIC ACID CONFORMATION; PHYLOGENY; RNA; SEQUENCE ANALYSIS, DNA;

ALGAE; ANIMALIA; GASTROPODA; HALIOTIS; HALIOTIS CORRUGATA; HALIOTIS DIVERSICOLOR; HALIOTIS DIVERSICOLOR SUPERTEXTA; HALIOTIS IRIS; HALIOTIS MIDAE; MAGNOLIOPHYTA;

EID: 0036148914     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-001-0006-0     Document Type: Article

References (30)

1. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: An example from the Compositae
2. Genetic evidence for hybridisation between Haliotis rubra and H. laevigata
3. Persistent nuclear ribosomal DNA sequence polymorphism in the Amelanchier agamic comples (Rosaceae)
4. The significance of a coincidence between evolutionary landmarks found in mating affinity and a DNA sequence
5. Genetics and sexual behavior of the pheromone producer, Chlamydomonas allensworthii (Chlorophyceae)
6. Recent genera and species of the family Haliotidae (Gastropoda: Vetigastropoda)
7. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective
8. Processing of truncated mouse or human rRNA transcribed from ribosomal minigenes transfected into mouse cells
9. Evidence for biased gene conversion in concerted evolution of ribosomal DNA
10. Growth characteristics of the hybrid between pinto abalone, Haliotis kamtschatkana Jonas, and ezo abalone, H. discus hannai Ino, under high and low temperature
11. Abalone lysin: The dissolving and evolving sperm protein
12. Evolution and systematics in Haliotidae (Mollusca: Gastropoda): Inferences from DNA sequences of sperm lysin
13. Positive selection is a general phenomenon in the evolution of abalone sperm lysin
14. Experimental hybridization in abalones
15. Evolution, distribution and systematics of Haliotidae
16. Interspecies chimeric sperm lysins identify regions mediating species-specific recognition of the abalone egg vitelline envelope
17. The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants
18. Nonsynonymous substitution in abalone sperm fertilization genes exceeds substitution in introns and mitochonchial DNA
19. Direct sequencing of genomic DNA for characterization of a satellite DNA in five species of Eastern Pacific abalone
20. Hybridization in the eastern Pacific abalones (Haliotis)
21. Comparative evolutionary analysis of rDNA ITS regions in Drosophila
22. Concerted evolution in an egg receptor for a rapidly evolving abalone sperm protein
23. The phylogeny of closely related species as revealed by the genealogy of a speciation gene, Odysseus
24. GC balance in the internal transcribed spacers ITS1 and ITS2 of nuclear ribosomal RNA genes
25. Abalone sperm lysin: Unusual mode of evolution of a gamete recognition protein
26. Positive Darwinian selection on two homologous fertilization proteins: What is the selective pressure driving their divergence?
27. Evolutionarily conserved structural elements are critical for processing of Internal Transcribed Spacer 2 from Saccharomyces cerevisiae precursor ribosomal RNA
28. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
29. Algorithms and thermodynamics for RNA secondary structure prediction: A practical guide