Microbial community analysis of thermophilic contact oxidation process by using ribosomal RNA approaches and the quinone profile method

Water Research

Volumn 36, Issue 2, 2002, Pages 429-438

  Kurisu, Futoshi ^a   Satoh, Hiroyasu ^a   Mino, Takashi ^a   Matsuo, Tomonori ^b  

^a UNIVERSITY OF TOKYO   (Japan)

^b TOYO UNIVERSITY   (Japan)

Author keywords

Fluorescence in situ hybridization; Microbial community structure; PCR DGGE; Quinone profile; Thermophilic Bacillus; Thermophilic contact oxidation process

Indexed keywords

DNA SEQUENCES; ELECTROPHORESIS; FLUORESCENCE; MICROBIOLOGY; RNA; WASTEWATER TREATMENT;

MICROBIAL COMMUNITY; QUINONE PROFILE METHOD;

BIODIVERSITY;

1,4 BENZOQUINONE; DNA FRAGMENT; RIBOSOME RNA;

MICROORGANISM; OXIDATION; QUINONE; WASTEWATER TREATMENT PLANT;

ARTICLE; BACTERIUM IDENTIFICATION; BIOREACTOR; CHEMICAL ANALYSIS; CONTROLLED STUDY; DENATURING GRADIENT GEL ELECTROPHORESIS; DNA SEQUENCE; EGGERTHELLA LENTA; FLUORESCENCE IN SITU HYBRIDIZATION; NONHUMAN; OXIDATION; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; TEMPERATURE DEPENDENCE; THERMOPHILIC BACTERIUM;

BACILLACEAE; BACILLUS LENTUS; BACILLUS THERMOCLOACAE; BACTERIA (MICROORGANISMS);

EID: 0036132631     PISSN: 00431354     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0043-1354(01)00225-1     Document Type: Article

References (25)

1. Probing activated sludge with oligonucleotides specific for proteobacteria: Inadequacy of culture-dependent methods for describing microbial community structure
2. Respiratory quinone profiles as tools for identifying different bacterial populations in activated sludge
3. Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implications
4. Phylogenetic identification and in situ detection of individual microbial cells without cultivation
5. Profiling of complex microbiol populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
6. Identification of bacteria in a biodegraded wall painting by denaturing gradient gel electrophoresis of PCR-amplified gene fragments coding for 16S rRNA
7. Ecological studies of aerobic submerged biofilter on the basis of respiratory quinone profiles
8. Isolation of genomic DNAs from plants, fungi and bacteria using benzyl chloride
9. Microbial community analysis of thermophilic contact oxidation process by using PCR-DGGE method
10. In situ identification of micro-organisms by whole cell hybridization with rRNA-targeted nucleic acid probes
11. In situ characterization of the microbiol consortia active in two wastewater treatment plants
12. Development and application of nucleic acid probes
13. Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum Cytophaga-Flavobacter-Bacteroides in the natural environment
14. Current methods of mutation detection
15. Prokaryotic genome size and SSU rDNA copy number: Estimation of microbial relative abundance from a mixed population
16. Identifying members of the domain Archaea with rRNA-targeted oligonucleotide probes
17. The domain-specific probe EUB338 is insufficient for the detection of all bacteria: Development and evaluation of a more comprehensive probe set
18. Taxonomic studies on Streptococcus bovis and Streptococcus equinus: Description of Streptococcus alacotolyticus sp. nov. and Streptococcus saccharolyticus sp. nov.
19. Transfer of Streptococcus lacits and related Streptococci to the genus Lactococcus gen. nov.
20. Endospore-forming Gram-positive rods and cocci: Bacillus
21. Bacillus thermocloacae sp., nov., a new thermophilic species from sewage sludge
22. The oligonucleotide probe database
23. Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
24. In situ identification of Lactococci, Enterococci and Streptococci
25. Characterization of bacterial community structures in thermophilic aerobic wastewater treatment processes by ribosomal RNA approaches