Online genomics facilities in the new millennium

Pharmacogenomics

Volumn 3, Issue 2, 2002, Pages 265-271

  Frishman, D ^a   Kaps, A ^b   Mewes, H W ^a,c  

^a INSTITUTE OF EPIDEMIOLOGY   (Germany)

^b Biomax Informatics AG   (Germany)

^c TECHNICAL UNIVERSITY OF MUNICH   (Germany)

Author keywords

Bioinformatics; Database; Genome analysis; Integration; Internet; Proteomics; Structural genomics

Indexed keywords

AMINO ACID; PROTEIN;

AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; DATA BASE; FUNGAL GENETICS; GENE EXPRESSION; GENE FUNCTION; GENETIC ANALYSIS; GENOMICS; GERMANY; HEALTH CARE FACILITY; HUMAN; HUMAN CELL; INFORMATION CENTER; INFORMATION PROCESSING; INTERNET; MEDICAL INFORMATION SYSTEM; NONHUMAN; ONLINE SYSTEM; PROTEIN PROTEIN INTERACTION; SEQUENCE ANALYSIS;

ANIMALS; COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; GENOMICS; HUMANS; ONLINE SYSTEMS;

ANIMALIA;

EID: 0036122694     PISSN: 14622416     EISSN: None     Source Type: Journal    
DOI: 10.1517/14622416.3.2.265     Document Type: Article

References (33)

1. Database resources of the National Center for Biotechnology Information: 2000 update
2. GenBank
3. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
4. SRS: Information retrieval system for molecular biology data banks
5. DBGET/LinkDB: An integrated database retrieval system
6. MIPS Arabidopsis thaliana Database (MatDB): An integrated biological knowledge resource based on the first complete plant genome
7. The FlyBase database of the Drosophila Genome Projects and community literature. The FlyBase Consortium
8. Worm Base: Network access to the genome and biology of Caenorhabditis elegans
9. Mining the draft human genome
10. The distributed annotation system
11. Functional and structural genomics using PEDANT
12. Automated genome sequence analysis and annotation
13. A genomic perspective on protein families
14. KEGG: Kyoto encyclopedia of genes and genomes
15. PartsList: A web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information
16. GeneMarkS: A self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions
17. Highly specific localization of promoter regions in large genomic sequences by promoter inspector: A novel context analysis approach
18. EST analysis online: WWW tools for detection of SNPs and alternative splice forms
19. The stanford microarray database
20. A two dimensional electrophoresis database of a human Jurkat T-cell line
21. A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms
22. In silico analysis of cancer through the cancer genome anatomy project
23. Genomes OnLine Database (GOLD): A monitor of genome projects world-wide
24. Overview of the yeast genome
25. MIPS: A database for genomes and protein sequences
26. Functions of the gene products of Escherichia coli
27. Systematic functional analysis of the yeast genome
28. Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach
29. A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
30. Genomic exploration of the hemiascomycetous yeasts: 1. A set of yeast species for molecular evolution studies
31. Comprehensive, comprehensible, distributed and intelligent databases: Current status
32. XML, bioinformatics and data integration
33. Creating the gene ontology resource: Design and implementation