Inheritance of random amplified polymorphic DNA (RAPD-PCR) markers and their use in population genetic studies of Calomys musculinus (Rodentia, Muridae), the reservoir of Argentine Hemorrhagic Fever

Hereditas

Volumn 135, Issue 1, 2001, Pages 85-93

  Chiappero, Marina B ^a   Gardenal, Cristina N ^a  

^a FACULTAD DE CIENCIAS MÉDICAS   (Argentina)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; CHROMOSOME BANDING PATTERN; FEMALE; GENETIC ANALYSIS; GENETIC DIFFERENCE; GENETIC MARKER; GENETIC POLYMORPHISM; HEMORRHAGIC FEVER; HERITABILITY; HETEROZYGOSITY; INHERITANCE; JUNIN VIRUS; MALE; NONHUMAN; PHENOTYPE; POPULATION GENETIC STRUCTURE; POPULATION GENETICS; PROGENY; RANDOM AMPLIFIED POLYMORPHIC DNA; RELIABILITY; RESERVOIR; RODENT;

ARGENTINA (FISH); CALOMYS; CALOMYS MUSCULINUS; JUNIN VIRUS; MURIDAE; RODENTIA;

EID: 0036110861     PISSN: 00180661     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1601-5223.2001.t01-1-00085.x     Document Type: Article

References (31)

1. Apostol BL, Black IV WC, Miller BR, Reiterand P and Beaty BJ, (1993). Estimation of the number of full sibling families at an oviposition site using RAPD-PCR markers: applications to the mosquito Aedes aegypti. Theor. Appl. Genet. 86: 991-1000.
2. Ayliffe MA, Lawrence GJ, Ellis JG and Pryor AJ, (1994). Heteroduplex molecules formed between allelic sequences cause nonparental RAPD bands. Nucl. Acids Res. 22: 1632-1636.
3. Benter TS, Papadopoulos M, Pape M, Manns M and Polidowa H, (1995). Optimization and reproducibility of Random Amplified Polymorphic DNA in Human. Anal. Biochem. 230: 92-100.
4. Black IV WC, (1996). FORTRAN programs for the analysis of RAPD-PCR data. http://lamar.colostate.edu/pub/ wbc4.
5. Chiappero MB, Sabattini MS, Blanco A, Calderón GE and Gardenal CN, Gene flow among Calomys musculinus populations in Argentina. Genetica, in press.
6. Cockerham CC, (1973). Analysis of gene frequencies. Genetics 74: 679-700.
7. Congiu L, Chicca M, Cella R, Rossi R and Bernacchia G, (2000). The use of random amplified polymorphic DNA (RAPD) markers to identify strawberry varieties: a forensic application. Mol. Ecol. 9: 229-232.
8. Cooper ML, (2000). Random amplified polymorphic DNA analysis of southern brown bandicoot (Isoodon obesulus) populations in Western Australia reveals genetic differentiation related to environmental variables. Mol. Ecol. 9: 469-479.
9. De Sousa GB, Panzetta de Dutari G and Gardenal CN, (1999). Genetic Structure of Aedes albifasciatus (Diptera: Culicidae) populations in central Argentina determined by random amplified polymorphic DNA-polymerase chain reaction markers. J. Med. Entomol. 36: 400-404.
10. Dezfuli BS and Tinti F, (1998). Species recognition of congeneric acanthocephalans in slider turtles by random amplified polymorphic DNA (RAPD) markers. J. Parasitol 84: 860-862.
11. Ellsworth DL, Rittenhouse KD and Honeycutt RL, (1993). Artifactual variation in Randomly amplified polymorphic DNA banding patterns. BioTech. 14: 214-217.
12. Excoffier L, Smouse P and Quattro J, (1992). Analysis of Molecular Variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
13. Felsenstein J, (2000). PHYLIP, phylogeny inference package. Version 3.6. http://evolution.genetics.washington. edu/phylip/.
14. Gordon DA, Lattier DL, Silbinger RN, Torsella J, Wolff JO and Smith MK, (1998). Determination of genetic diversity and paternity in the gray-tailed vole (Microtus canicaudus) by RAPD-PCR. J. Mammal. 79: 604-611.
15. Grosberg RKD, Levitan L and Cameron BB, (1996). Characterization of genetic structure and genealogies using RAPD-PCR markers: a random primer for the novice and nervous. In: Molecular Zoology: Advances, Strategies and Protocols (eds JD Ferraris and SR Palumbi). Wiley-Liss Inc., New York, p. 67-100.
16. Hackett CA, Wachira FN, Paul S, Powell W and Waugh R, (2000). Construction of a genetic linkage map for Camellia sinensis (tea). Heredity 85: 346-355.
17. Haymer DS, (1994). Random amplified polymorphic DNAs and microsatellites: what are they, and can they tell us anything we don't already know? Ann. Entomol. Soc. Am. 87: 717-722.
18. Huff DR, Peakall R and Smouse PE, (1993). RAPD variation within and among natural populations of outcrossing buffalograss (Buchloë dactiloides (Nutt.) Engelm.). Theor. Appl. Genet. 86: 927-934.
19. Kambhampati S, Black WC and Karamjit SR, (1992). Random amplified polymorphic DNA of mosquito species and populations (Diptera, Culicidae): technique, statistical analysis and applications. J. Med. Entomol. 29: 939-945.
20. Levitan DR and Grosberg RK, (1993). The analysis of paternity and maternity in the marine hydrozoan Hydractinia symbiolongicarpus using randomly amplified polymorphic DNA (RAPD) markers. Mol. Ecol. 2: 315-326.
21. Lynch M and Milligan BG, (1994). Analysis of population genetic structure with RAPD markers. Mol. Ecol. 3: 91-99.
22. Micheli MR, Bova R, Pascale E and D'Ambrosio E, (1994). Reproducible DNA fingerprinting with the random amplified polymorphic DNA (RAPD) method. Nucl. Acids Res. 22: 1921-1922.
23. Miller M, (1998). Tools for population genetic analyses (TFPGA). A windows program for the analysis of allozyme and molecular population genetic data. Version 1.3. Available at http://herb.bio.nau.edu/∼miller/tfpga.htm.
24. Mills JN and Childs JE, (1998). Ecologic studies of rodent reservoirs: their relevance for human health. Emerging Infect. Dis. 4: 529-537.
25. Riedy MF, Hamilton III WJ and Aquadro CF, (1992). Excess of non-parental bands in offspring from known primate pedigrees assayed using RAPD-PCR. Nucl. Acids Res. 20: 918.
26. Schneider S, Kueffer JM, Roessli D and Excoffier L, (1997). ARLEQUIN Version 1.1: A software for population genetic data analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland, http:// anthropologie.unige.ch/arlequin.
27. Schrag SJ and Wiener P, (1995). Emerging infectious diseases: What are the relative roles of ecology and evolution? Trends Ecol. Evol. 10: 319-324.
28. Stewart CN and Excoffier L, (1996). Assessing population genetic structure and variability with RAPD data: application to Vaccinium macrocarpon (American cranberry). J. Evol. Biol. 9: 153-171.
29. Vucetich LM, Vucetich JA, Joshi CP, Waite TA and Peterson RO, (2001). Genetic (RAPD) diversity in Peromyscus maniculatus populations in a naturally fragmented landscape. Mol. Ecol. 10: 35-40.
30. Weir BS and Cockerham CC, (1984). Estimating F-statistics for the analysis of population structure. Evolution 38: 1350-1358.
31. Williams JGK, Kubelik AR, Livak AJ, Rafalski JA and Tingey SV, (1990). DNA polymorphisms amplified by arbitrary primers are useful genetic markers. Nucl. Acids Res. 18: 6531-6535.