Cellular oscillators in animal segmentation

In Silico Biology

Volumn 2, Issue 2, 2002, Pages 111-123

  Jaeger, Johannes ^a   Goodwin, Brian C ^a  

^a STONY BROOK UNIVERSITY   (United States)

Author keywords

Cellular oscillators; Coarse grained modeling; Developmental dynamics; Evolution of development; Phenomenological modeling; Segmentation; Short germ band insects; Somitogenesis

Indexed keywords

ANNELID WORM; CELL INTERACTION; CELL MOTION; COMPARATIVE STUDY; COMPUTER SIMULATION; CONFERENCE PAPER; CONTROLLED STUDY; DEVELOPMENTAL STAGE; EMBRYO SEGMENTATION; EVOLUTION; GENE EXPRESSION; INSECT; INVERTEBRATE; KINETICS; MESODERM; MOLECULAR DYNAMICS; MOLECULAR MODEL; NONHUMAN; OSCILLATOR; PHYLUM; SOMITE; VERTEBRATE; ALGORITHM; ANIMAL; ANIMAL EMBRYO; ARTICLE; BIOLOGICAL RHYTHM; CHICKEN; DROSOPHILA MELANOGASTER; GENE EXPRESSION REGULATION; HISTOLOGY; MORPHOGENESIS; PHYSIOLOGY;

ALGORITHMS; ANIMAL; BIOLOGICAL CLOCKS; BODY PATTERNING; CHICKENS; COMPUTER SIMULATION; DROSOPHILA MELANOGASTER; EMBRYO, NONMAMMALIAN; GENE EXPRESSION REGULATION, DEVELOPMENTAL; MORPHOGENESIS; SOMITES; SUPPORT, NON-U.S. GOV'T; ANIMALS;

EID: 0036014563     PISSN: 13866338     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Conference Paper

References (67)

1. Microarray-based analysis of early development in Xenopus laevis
2. PAX-6 in development and evolution
3. A cell cycle model for somitogenesis: Mathematical formulation and numerical simulation
4. Control of somite number during development in a vertebrate, Xenopus laevis
5. A gene that resuscitates a theory - Somitogenesis and a molecular oscillator
6. A clock and wavefront model for control of the number of repeated structures during animal morphogenesis
7. A clock-work somite
8. Pax group III genes and the evolution of insect pair-rule patterning
9. Punctuated equilibria: An alternative to phyletic gradualism
10. Gradient formation of the TGF-β homolog Dpp
11. Waves of mouse lunatic fringe expression, in four-hour cycles at two-hour intervals, precede somite boundary formation
12. Patterns of gene expression during Drosophila mesoderm development
13. Arthropods: The crustaceans, spiders and myriapods
14. A phase-shift model for the spatial and temporal organisation of developing systems
15. Somitogenesis
16. Control of her1 expression during zebrafish somitogenesis by a Delta-dependent oscillator and an independent wave-front activity
17. The molecular genetics of embryonic pattern formation in Drosophila
18. A cellular oscillator model for periodic pattern formation
19. Notch signalling is required for cyclic expression of the hairy-like gene hes1 in the presomitic mesoderm
20. Flow-distributed oscillations: Stationary chemical waves in a reacting flow
21. A chemical flow system mimics waves of gene expression during segmentation
22. Segmentation and somitogenesis derived from phase dynamics in growing oscillatory media
23. A clock and trail model for somite formation, specialization and polarization
24. Mechanisms of vertebrate segmentation
25. Automated assay of gene expression at cellular resolution
26. Hox genes in vertebrate development
27. Oscillating expression of c-hey2 in the presomitic mesoderm suggests that the segmentation clock may use combinatorial signaling through multiple interacting bHLH factors
28. The lunatic fringe gene is a target of the molecular clock linked to somite segmentation in avian embryos
29. Pattern formation in fragmented eggs of the short germ insect Schistocerca gregaria
30. Disruption of segmentation in a short germ insect embryo: I. The location of abnormalities induced by heat shock
31. Disruption of segmentation in a short germ insect embryo: II. The structure of segmental abnormalities induced by heat shock
32. On pattern and growth
33. Elegant hypothesis and inelegant fact in developmental biology
34. Synchronization, chaos, and the breakdown of collective domain oscillations in reaction-diffusion systems
35. Generic physical mechanisms of morphogenesis and pattern formation as determinants in the evolution of multicellular organization
36. Is segmentation generic?
37. Avian hairy gene expression identifies a molecular clock linked to vertebrate segmentation and somitogenesis
38. Developmental evolution: Insights from studies of insect segmentation
39. The progeny of wingless-expressing cells deliver the signal at a distance in Drosophila embryos
40. Periodic segmental anomalies induced by heat shock in the chick embryo are associated with the cell cycle
41. Cooperative control of positional information in Drosophila by bicoid and maternal hunchback
42. Mechanism of eve strip formation
43. Gene circuits and their uses
44. Stripe forming architecture of the gap gene system
45. Gene networks capable of pattern formation: From induction to reaction-diffusion
46. Phenotypic and dynamical transitions in model genetic networks I. Emergence of patterns and genotype-phenotype relationships
47. Phenotypic and dynamical transitions in model genetic networks II. Application to the evolution of segmentation mechanisms
48. Specification of the basic body pattern in insect embryogenesis
49. Zebrafish Mesp family genes, mesp-a and mesp-b are segmentally expressed in the presomitic mesoderm, and mesp-b confers the anterior identity to the developing somites
50. Annelids, the segmented worms
51. Clocked gene expression in somite formation
52. Somite development in zebrafish
53. The chemical basis of morphogenesis
54. The segment polarity network is a robust developmental module
55. Evolution of gene networks by gene duplications: A mathematical model and its implications on genome organization
56. Microarray analysis of Drosophila development during metamorphosis